Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
------->
GAMYB
--------->
ANAC58
------
--------->
ANAC58
<-----
--------->
TOE1(2)
--------->
YAB1
------>
ZmHOX2a(2)
-------->
HAHB4
--------->
MYB46(3)
<--------
ATHB1
<------
ZmHOX2a(2)
--------->
ATHB12
<---------
ICU4
<---------
ICU4
--------->
ATHB12
--------->
ATHB51
-------->
ATHB1
--------->
ICU4
======================
HOX2a_HOX2a
<---------
YAB1
=====================
HOX2a_HOX2a
--------->
YAB1
------>
ZmHOX2a(1)
--------->
MYB52(1)
<---------
YAB1
------>
ZmHOX2a(1)
<---------
ATHB12
<-------
TEIL
<---------
AHL20(2)
<---------
HSFB2a(2)
--------->
ARR14(2)
--------->
AHL20(2)
================================
HOX2a_HOX2a
--------->
YAB1
=================================
HOX2a_HOX2a
<---------
YAB1
-----
--------->
HSFB2a(2)
<---------
ARR14(2)
---------->
DOF2
<---------
ATHB51
tccaataacatcctcgaagtctcctctaaatcattggatccaacgaaattcatgtttatctaaactaactcgaataaagaaacgattataataattgcac
22201700
--------->
ANAC55(2)
--------->
ANAC46
--------->
ANAC58
--------->
TOE1(3)
--------->
TOE2(3)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(2)
--------->
AtLEC2
<------
NtERF2
--------->
ANAC55(1)
--------
--------->
At4g35610
--------->
HSFB2a(1)
--------
<---------
DEAR3(2)
<---------
HSFC1(2)
--------->
PCF2
--------
<---------
RAP2.6(2)
--------->
HSFC1(2)
--------->
PCF5
------>
NtERF2
--------->
RVE1(1)
<---------
DEAR3(1)
<---------
ARR14(2)
<------
MYB46(1)
--------->
DEAR3(1)
--------->
YAB1
--------->
RAP2.6(3)
--------->
ARR14(2)
<------
MYB83
--------->
ANAC46
<---------
YAB1
--------------------->
WRI1
<---------
LBD16
<---------
MYB46(3)
<---------
ALFIN1
--->
ZAT18
<-----------
TGA1
<---------
At4g35610
<---------
HSFB2a(1)
<---------
ALFIN1
----
ZAT18
<-----------
HVH21
-------->
P
------->
TEIL
--------->
ANAC58
<---------
ALFIN1
---->
ANAC46
--------->
At4g35610
--------->
ETT(1)
--------->
ANAC58
<---------
MYB52(1)
--------->
ANAC46
actatgaaaaatatcagaagcgtcatagaaattgtcggctacctccatgcacggaaccttcacgaaacagttggtccctcacacacttcatcgccacgct
22201800
------------>
CBF
<-------
MYC2
<-------
MYC3
------->
MYC3
------->
MYC2
------->
MYC2
------->
MYC3
------->
PIF5
<-------
MYC2
<-------
PIF5
--------->
O2
<-------
MYC4
<---------
O2
<-------
MYC3
--------->
ANAC55(2)
------->
MYC4
<---------
ANAC46
--------->
TGA1a
<---------
ICU4
--------->
O2
--------->
ARR11(3)
===================
bZIP_DOF
--------->
ANAC55(2)
<---------
ARR14(2)
<---------
ANAC55(2)
<---------
ANAC55(2)
--------->
ARR14(2)
--------->
TGA1a
--------->
WOX13(1)
<---------
TGA1a
--------->
AtMYB61
--------->
YAB1
------------>
CBF
<---------
O2
--------->
ANAC46
<---------
ATHB12
---------->
DOF2
<-------
MYC3
->
ANAC46
--------->
ANAC46
--------->
YAB1
<---------
TGA1a
------->
MYC3
->
ANAC58
<-------
TEIL
<---------
ARR11(3)
<---------
REM1(2)
--------->
O2
->
ANAC58
<-----------
GT1
<---------
CCA1(2)
<-----------
HVH21
<---------
O2
---
ataccacgtgtcaattttacatacaccaaaacatatctactaatcatacctcttcacgtgtaacaaagtcccattcaacgtggcaattacagaccccaaa
22201900
<---------
ANAC46
--------->
ETT(1)
--------->
ALFIN1
------->
MYC2
<-------
MYC3
<-------
MYC2
------->
MYC3
<---------
ANAC58
<---------
O2
--------->
O2
--------->
TGA1a
<---------
ARR14(2)
<---------
TGA1a
--------->
ARR11(3)
--------->
ANAC55(2)
<---------
ALFIN1
--------->
ARR14(2)
<---------
ANAC55(2)
--------->
MYB46(3)
<-----------
GT1
<---------
ANAC58
--------->
ANAC46
----------->
GT1
-------
<---------
REM1(2)
<---------
HSFB2a(2)
--------->
ANAC58
----------->
RAV1(1)
<---------
ATHB12
<-----------
HVH21
<-----------
GT1
--------->
ANAC58
--------->
ANAC46
------>
ICU4
<-----------
HVH21
--------->
HSFB2a(2)
--------->
ANAC46
------>
ZmHOX2a(1)
<
attatgaactaatcaaacctcttcacgtgtcgcaaacttgtagaacgttgaaaccccccactcacacgaagtgtatatatcctcttcacaacacaaacat
22202000
<-----------
HVH21
--------->
LBD16
------>
MYB83
--------->
MYB52(1)
<---------
AHL20(2)
------->
GAMYB
<---------
AHL20(2)
------>
MYB46(1)
<---------
YAB1
--------->
MYB55(1)
<----------
DOF2
--------->
MYB46(3)
<---------
YAB1
<---------
MYB111(2)
<---------
CCA1(2)
<---------
MYB46(2)
<-----------
ARR10
--------->
AtMYB61
---
<----------
DOF2
<---------
ARR11(3)
<---------
MYB55(2)
----
<---------
YAB1
<---------
CCA1(2)
<---------
MYB111(1)
<---
--------->
ARR11(3)
--------->
ARR11(3)
--------->
ANAC46
<---
-->
YAB1
---------->
DOF2
<---------
ARR11(3)
<---------
ARR11(1)
------>
ZmHOX2a(2)
<------
---------
ICU4
---------->
DOF2
--------->
YAB1
--------->
AHL20(2)
-------->
P
<------
NtERF2
aaacattacttcaaacaaagacttgaaagaactatctttgttttcactcatatcttatctttattaa
atgatccatacaccaaccgggtcgagtcgtcgg
22202100
<---------
MYB46(3)
<---------
DEAR3(1)
<-----------
ARR10
<---------
ABI4(1)
--------->
GLK1(2)
<---------------------
WRI1
<---------
GLK1(2)
--------->
LBD16
<---------
ATERF1(1)
<---------
LBD16
--------->
LBD16
<---------
RAP2.3(2)
<---------
DEAR3(1)
<---------
RAP2.6(2)
<---------
ATERF1(2)
<---------
LBD16
--------->
DEAR3(1)
<----------
DOF2
--------->
ATERF1(2)
<---------
DAG2
--------->
MYB46(3)
--------->
ATERF1(1)
------>
GLK1(2)
<---------
ARR14(2)
<----------
DOF2
<---------
LBD16
----->
ARR14(2)
<------
NtERF2
--------->
GLK1(2)
<---------
ATERF1(1)
------
GLK1(2)
----------->
GT1
<---------
ARR14(2)
<-----------
GT1
----------->
ARR10
----
------
ARR14(2)
--------->
At5g28300
------>
ZmHOX2a(2)
<---------
DAG2
------>
NtERF2
--------->
At4g35610
---
TOE1(2)
------>
NtERF2
--------->
AtLEC2
<-----------
GT1
<----------
DOF2
<------
NtERF2
>>>>>>
attctgacctttccggcggtgaatccatgcgaatcgatctctttaaccactctcgtcgactcacttttacaactcgccggcgagattcttagcttcaaac
22202200
<---------
ARR14(2)
<---------
LBD16
----------->
GT1
--------->
GLK1(1)
<---------
ZAT6
--------->
At4g35610
<-----------------------
TaNAC69(2)
<---------
GLK1(1)
---------->
DOF2
------>
NtERF2
--------->
ARR11(3)
--------->
MYB46(3)
<---------
ETT(1)
<---------
ARR11(3)
<-----
------>
MYB46(1)
----------->
HVH21
<----------
DOF2
--------->
ARR14(2)
------>
MYB83
---------->
DOF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
----->
AtMYB61
----------->
RAV1(1)
--------->
ANAC46
<---------
ARR11(3)
--------->
ARR14(2)
>>>>
MYB80
--------->
MYB46(3)
<---------
GLK1(2)
--------->
ARR11(3)
--------->
LBD16
--
caaaacacttctctaccaacaaaagaagtgttaaagaaactctccgacatgttcaaactcttgtgatcttctttgaagagctccggattcaaatccgagt
22202300
<---------
ARR14(2)
--------->
HSFC1(1)
<---------
HSFC1(1)
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
At4g35610
<------
MYB46(1)
<-----------
TGA1
<------
MYB83
--------->
bZIP60(2)
--------->
MYB46(2)
<---------
bZIP60(1)
--------->
MYB59
<---------
TGA1a
<---------
MYB46(3)
--------->
bZIP60(1)
--------->
SPL7
--------->
ANAC55(2)
<---------
MYB52(1)
<---------
ANAC55(2)
<---------
SPL7
--------->
ANAC58
<------
NtERF2
--------->
ANAC55(1)
<---------
DEAR3(2)
--------->
O2
<---------
GLK1(2)
--------->
MYB55(2)
--------->
ANAC58
------>
NtERF2
--------->
TGA1a
<---------
ANAC46
<---------
O2
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
ANAC46
<---------
MYB52(1)
<-----------
STF1
<---------
LBD16
<---------
ALFIN1
<---------
ZAT14
<---------
ATERF1(2)
==============
bZIP_DOF
--------->
ZAT14
<---------
LBD16
<-----------
HVH21
--------->
At4g35610
<---------
HSFB2a(2)
-
--------->
MYB52(1)
--------->
ICU4
<----------
DOF2
--------->
LBD16
--------->
HSFB2a(2)
<
------
HVH21
<---------
MYB46(3)
<----------
DOF2
--------->
TGA2(2)
------>
ZmHOX2a(1)
-----
--------->
GT1
<---------
MYB46(3)
=======================
bZIP_DOF
<---------
ARR11(3)
-------
cgggtcaataccggcgggtcgttcggtaatcttgagcctttcagagcttcacgtcatcttccagaaactcaagttcctactagacgactgtacaagagat
22202400
-----
<-------
================
--------->
ANAC58
<-----------
GT1
--------->
ANAC58
----------->
HVH21
--------->
ANAC55(2)
<---------
ARR14(2)
--------->
TGA1a
<---------
WRKY38(1)
--------->
ARR14(2)
--------->
O2
<---------
WRKY12
--------->
LBD16
<---------
O2
--------->
WRKY18(1)
<---------
HSFB2a(2)
<---------
ALFIN1
--------->
ANAC58
<-----------
HVH21
--------->
HSFB2a(2)
--------->
ARR14(2)
<-------
MYC3
--------->
ANAC58
--------->
LBD16
<---------
LBD16
<---------
ARR14(2)
------->
MYC3
-------->
At4g35610
<---------
LBD16
<---------
LBD16
--------->
ARR14(2)
<---------
REM1(2)
---------
At4g35610
<---------
GLK1(1)
--------->
ARR14(2)
<---------
CCA1(2)
<---------
ANAC55(2)
---->
ALFIN1
------->
TEIL
<---------
ARR14(2)
<------
ZmHOX2a(2)
--------->
bZIP60(2)
-->
CCA1(2)
--------->
TOE2(3)
<---------
At4g35610
<---------
ARR14(2)
----------->
HVH21
ggagctaagctatatatgttaatgaactccggtcaagtctcggctcatttccgggatttgacccgatccatatccactagcctcgacacgtttccagtca
22202500
----------->
HVH21
--------->
DEAR3(2)
--------->
ANAC58
<---------
LBD16
--------->
ANAC58
--------->
WRKY38(1)
<---------
ARR14(2)
<---------
At4g35610
--------->
GLK1(2)
--------->
At4g35610
--------->
ARR14(2)
<-------
GAMYB
<---------
GLK1(1)
<---------
MYB46(3)
<-----------
HVH21
--------->
ANAC58
--------->
MYB52(1)
---->
MYB59
----------->
RAV1(2)
--------->
GLK1(2)
--------->
GLK1(1)
--------->
ANAC58
----
HVH21
-------->
P
--------->
At4g35610
<---------
ANAC58
--------->
ANAC58
<----------
ID1
=========
MYC_MYB
<---------
At4g35610
<---------
ANAC58
--------->
LBD16
--------->
ANAC58
ggtctgttgacttacctggagaagttaatgagctaatctatctagtaatgcgtcagactcgaaaatccgaagcaagacccgaccgagacgacaaacgagc
22202600
Previous
Next
AGI:
At1g60190.1
Description:
armadillo/beta-catenin repeat family protein / U-box domain-containing protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G10560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40900.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro doma
Range:
from: 22202068
to: 22204343
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version