Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <-----------GT1                                                   <---------AHL20(2)                             <--                                                  <---------AHL20(1)                            -----                                                  <---------AHL20(2)                            -----                                               --------->AHL20(2)                               <----                                               <---------AHL20(2)               --------->HSFB2a(2)   --------->AHL20(1)                          --------->AHL20(1)               <---------------AGL15   <---------ARR11(3)                         --------->ICU4                    <---------HSFB2a(2)   <---------AHL20(2)                         <---------ATHB51           --------->AHL20(2)    ------   --------->AHL20(2)                         --------->AHL20(2)         <---------AHL20(2)    <-----   <---------AHL20(1)                     --------->AHL20(2)            --------->AHL20(2)  ---------   --------->ARR11(3)             <---------YAB1  --------->AHL20(1)    <---------AHL20(1)  ---------  --------->AHL20(2)              ----------->GT1 --------->AHL20(2)    <---------AHL20(2)  <-------- -------->AHL20(2)              --------->YAB1<---------AHL20(2)<---------YAB1 ----------------->AG   aaaaatatattgttgatgacatttcatttttctataatgaaaaatgaaataatttatttcaccaatatgatcaaattattttccaaaacttgaattaatt  21687800                                                                         --------->AHL20(2)                                                                         --------->AHL20(1)                                                                    <---------AHL20(2)                                        --------->AHL20(2)          --------->AHL20(2)    --------->MYB52(1)                  <---------AHL20(1)          <---------YAB1  --------->MYB46(3)                <---------ATHB51               --------->AHL20(1)  --------->DEAR3(2)                --------->AHL20(2)             --------->AHL20(2) -------YAB1                        <---------AHL20(2)             <---------AHL20(1) ---->YAB1                          --------->ICU4                --------->YAB1 --->HAHB4                  ---------->DOF2                    <---------AHL20(2) -----ICU4              --------->YAB1  --------->AHL20(1)     <---------ICU4  <---------YAB1 --->ICU4           <---------AHL20(2)  <---------AHL20(2)    --------->AHL20(2) ----ATHB51        --------->AHL20(2)--------->AHL20(2)       --------->ICU4 --------->YAB1 >AHL20(1)         --------->AHL20(1)<---------AHL20(2)  ----------->GT1 <---------AHL20(2) >AHL20(2)         <---------AHL20(2)--------->AHL20(1) --------->DAG2  --------->AHL20(2)          - -AHL20(2)    <------ZmHOX2a(1)----------->GT1         ---------->DOF2  <---------AHL20(2)   --------   atgaacagacggagtaggaaatttaatagtaaaaggaaataatttattgttttgcaaaaaagtaataaatataattaaattatacttaagtactactaaa  21687900                                                                          <---------DAG2                                                                          <----------DOF2                                                                 <----------DOF2                                                    <---------RAP2.6(3) ------>MYB46(1)        ------                                                   <---------ANAC58     ------>MYB83      ------->GAMYB            ---------->DOF2                        <---------ANAC46   <---------MYB59    --------->MYB46(3)       <----------ID1                    <---------AHL20(2)      <---------DAG2    <---------ZAT14 <---------YAB1                      <---------AHL20(2)  <---------AHL20(2)        <---------ZAT18 ----------------------->ANAC81      --------->AHL20(2)  --------->AHL20(2)        --------->ZAT14 ------->AGL15                    <---------ICU4   <---------ANAC58  --------->DEAR3(2)<---------ALFIN1   aatatgaaaaaaacaaaagacaaaattaagacttaaaaattatataatgtctgccgtatttaaatagctttaccgactttttcagagcacaacctccaag  21688000                                                                                                <----                                                                                                <----                                                                                             <-------                                                                                            <-------GAMYB                                                                                           <---------MYB46(3)                                                                                           --------->MYB55(2)                                                                                           --------->MYB52(2)                                                                                           <------MYB46(1)                                                                                         <--------P                                                                                        <-------GAMYB                                                                                       <------MYB83                                                                                       <------MYB46(1)                                                                                       <---------MYB46(3)                                                                                 --------->AHL20(2)                                                                                --------->AHL20(2)                                                                             --------->AHL20(2) -----                                                                        --------->AHL20(2) <------MYB83                                         <-----------RAV1(2)       <----------ID1<---------AHL20(2)                            <---------DAG2<---------TOE1(3)        ----------->GT1    --------->MYB59    --------->TOE2(3)       <----------DOF2                      ---------->DOF2<---------AHL20(2)  < --->ANAC46   --------->LBD16   <---------At4g35610        ---------->DOF2  --------->AHL20(2) ------   agacaacatcaaaacccagaaaactgaacgctttatctgctcttcaggtttaagaggtttagaaagaaaaagaaaaaaataaaaaaatttggttggttag  21688100     --------->LBD16   <---------LBD16 --------->PCF2 --------->PCF5        --------->ZAT18 <---------TCP20       <---------ZAT14                                                          <---- -----At4g35610        <---------ZAT18                                                        ------- -----ZAT2             --------->ZAT14                                                  <---------ANAC58 --MYB52(1)    <---------ANAC46                                                         <---------ANAC58 ---->At4g35610<---------ANAC58   <---------ANAC58                               ------>ZmHOX2a(2) -----------HVH21    <---------GLK1(1)   <------ZmHOX2a(2)                      <---------GLK1(1) --->MYB52(2)  <---------ANAC58   <---------ANAC58             --------->YAB1   --------->GLK1(1)   ctggtcccgcgagtttttcttggagttcacttaaatccttgcgatcaatttgaaaaatccaccaagaatcacacaaaaactgatctctgtgcgtctatat  21688200                 <---------At4g35610                   --------->GLK1(1)                         <---                 --------->At4g35610 <---------ANAC55(2)                         --------->TOE1(3) --          <---------At5g28300 --------->YAB1       <------ZmHOX2a(2)             --------->TOE2(3) <-        <-------TEIL<---------At4g35610    --------->MYB52(1)                 ---------->ID1    ----- -----AHL20(2)<---------MYB52(1)    <-------TEIL --------->GLK1(1)        <----------DOF2    -------- ---->TBP<-----------GT1 --------->HSFB2a(2)     *TSS  <---------GLK1(1)---------->ID1    ---------->DOF2   aatgaagagattcactgtttgctgcttctcaaacaaaatacataagaacggagatcgaaatccagacaaggtttgtctttttcccttaacaaaaaagatt  21688300      <---------ANAC46      <---------ANAC58      <---------ANAC58  <----------DOF2 ------AHL20(2) ------->ARR11(3)                                           ------>ZmHOX2a(2) --------ARR11(3)            <---------MYB52(1)           --------->ARR11(3) ---->AHL20(2)              <-----------HVH21             <---------AGP1    <----------DOF2         < --->GT1           <---------GLK1(2)                --------->ATHB12 <---------GLK1(2)     <---------YAB1   aaatctttgtgtgttttcttagaatttctctgttacccattagccaatttctcttgatttgatctgggtctgattctccttttgggttatgttatgttag  21688400                                                       <---------GLK1(1)                                                      --------->ARR14(2)                                              <---------TOE1(3)       ---------->DOF2     ---------->DOF2    <---------TOE2(3)<----------DOF2            <----------DOF2 ---------ATHB12<---------TOE2(3)  <---------ATHB12   <---------ARR14(2)                 <---------ICU4   aaatcaagagaaagcatggaggtttcaagaaaagacaatgaagaggttagggtttggatatgttcctttcttcgttgccaagtcttgttcatcttttcag  21688500                                                                      --------->MYB46(3)                                                                <---------ANAC58                                                                <---------ANAC46                                                           --------->ATHB12                                                           <--------HAHB4                                            <---------DAG2 <---------ICU4                                      <---------ZAT6       --------->YAB1                                <----------DOF2        <---------AHL20(2)                             ------->TEIL<-----------GT1  <---------ATHB12 <----------DOF2            <---------CCA1(2)<----------DOF2    <---------ANAC58   acactttcttcatttctaagttaaacttttgaatcttttagtcttacctttctctgtttaatcatttcttgaacagcctgaaaaacagaacaacaacaat  21688600                      --------->ZAT18                 <---------YAB1          <---------WOX13(1)                                       <---------ANAC58        --------->ATHB51                                           <---------ANAC58        --------->ATHB12                                      <-------TEIL       <---------YAB1------>ZmHOX2a(2)                  <---------HSFB2a(2)                        <-       <---------AHL20(2)                 <---------ICU4--------->HSFB2a(2)                  --------     <---------------AGL15                --------->YAB1<---------ANAC46                  ------>NtERF2    <-----------------AGL3               <---------ATHB12--------->LBD16              --------->ALFIN1    <-----------------AGL2        --------->ICU4        <---------LBD16              <-----------HVH21    ----------------->AGL3     <---------AHL20(2)      <---------LBD16    --------->At4g35610<-------   gtagcatctataattggttctgatcgcaccaatgtaattgtgaatcatgacttctcttccgggatgcattcgtggcatccgaattgctgtgaggcctttg  21688700  Previous    Next  AGI:  At1g58370.1    Description:  RXF12; hydrolase, hydrolyzing O-glycosyl compounds. similar to glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G10050.1); similar to glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G08160.2); similar to glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G08160.1); similar to putative xylanase Xyn2 [Nicotiana tabacum] (GB:AAZ79233.1); similar to putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] (GB:AAX33301.1); similar Range:  from: 21688249    to: 21691986    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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