Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <------ZmHOX2a(2)                                           --------->ARR11(3)                                           --------->ARR14(2)                                           <---------AGP1                                           --------->AGP1 ---------->DOF2    ------>ZmHOX2a(1)                                           <---------ARR11(3)             ---------->ID1                                           <-----------ARR10          <---------ANAC58                                           <---------ARR14(2)         <---------ANAC58                                          <---------CCA1(2)       ---------->DOF2                               <----------ID1------>ZmHOX2a(2)<----------ID1--------->TOE2(3)    ----   acagaagactagaattgaaacccagaagaaattacgacaaaaccagatctaaattccactaaaagggacaaagcttgtccttaaactcagtttctacaat  21439400                                             --------->TOE1(3)                                             --------->TOE2(3)                                           ------->TEIL                                          <---------ARR11(3)     <-----------GT1                       --------->DAG2   --------->ANAC58       <-----------GT1          ----------->GT1     <---------MYB46(3)       ------>ZmHOX2a(1)                           <- ----->YAB1           ---------->DOF2   --------->ANAC58    <---------ICU4 --------->MYB46(3)      <-   tacaaaaaaaaccagaaaaatcagtaaagcagttgttactgcaagaaccttaacttcctccaaaattacacaattcaaccaattcgaagcgctatcttca  21439500                               --------->ANAC58                         --------->TOE1(3)                         --------------->AGL15  --------->ANAC46                         --------->TOE2(3) <---------ICU4                        <-----------------AGL1  --------->ANAC55(2)                        ----------------->AGL1  <---------ANAC55(2)                        ----------------->AG    --------->ANAC58                       <---------At5g28300--------->ICU4                      <<<<<<<<<GT-1 --------->DAG2           ------>ZmHOX2a(2)             <---------YAB1    --------->ANAC58 --------->ANAC58    <----------DOF2           ------- --------ANAC58       <-----------GT1----------->GT1       --------->ARR11(3)                 <------ --------ANAC58  ------>ZmHOX2a(2) ---------->DOF2         <---------ARR11(3)      <-----------GT1   ggcttgaagccgaagatgatcgatttaccttgaacggaaaagtaaaaatcacgcatttgatgatcttcttctttttcttcaatttatacaaaatcgagct  21439600         <---------ANAC58                                                     <-----------GT1         <---------ANAC58                                <------------------------ANAC81   --------->YAB1         <---------TGA1a                      --------->ARR11(3)            <---------ANAC58      ----------->HVH21        --------->GLK1(2)      <-----------RAV1(1)   <---------ANAC58  <------ZmHOX2a(1) -->At4g35610          <---------ATHB12       <---------GLK1(2)          <---------GLK1(1) <--------- ---At4g35610   <------ZmHOX2a(2)             <---------ARR11(3)<----------DOF2    <----------DOF2   caatttttctgacgagcgatcaccaatggagagaaactgatcagtagagattttctctgtggttttcttttgtagatttcttactcttttgaatcaggag  21439700                                                                                       --------->YAB1                                                                                      <---------ATHB12                                                                                     ------>MYB46(1)                                                                                     ------>MYB83                                                                                    --------->WOX13(1)                                                                                  <---------ATHB12                                                                                  ------------>CBF                                                                                  <---------MYB55(2)                                                                                  --------->MYB46(3)                                                                                 -------->P                                                                                 --------->ANAC58                                                                                 ------>MYB46(1)                                                                                 --------->ANAC58                                                                               ------->GAMYB                     <----------DOF2                    ----------->GT1       --------->MYB46(3)             <---------YAB1                     ----------------->AGL1 --------->AHL20(2)         --------->ARR11(3)                    <-------TEIL--------->GLK1(1)<-----------GT1         <---------GLK1(2)                --------->AHL20(2)           <---------AHL20(1)         <---------ARR11(3)               <---------AHL20(2)     --------->ANAC46------>MYB83      --        <---------RVE1(1)           <----------DOF2    ----------->GT1 --------->AHL20(1)        <--- --RAV1(2)  <-----------GT1         <---------DAG2  ---------->DOF2*TSS<---------AHL20(2)    <-------   agtttttcagagattttcattttcttttgtaacatctactttatttaaattcgtaaaagggaaatacaaacaattaattaaccaaccaatcagagattta  21439800                                              <---------WOX13(1)                                             <------------CBF                                           --------->AHL20(1)                                           --------->AHL20(2)                   --------->AHL20(2)  <---------AHL20(2)                   <---------AHL20(2)  --------->AHL20(2)               <---------AHL20(2)      --------->AHL20(1)              <---------AHL20(1)      --------->AHL20(2)            --------->AHL20(1)        <---------AHL20(2)       <---------AHL20(2)          --------->AHL20(2)       --------->AHL20(2)     --------->AHL20(2)      --------->AHL20(2) --------->AHL20(2)<---------AHL20(2) ------>MYB83      --------->YAB1   <---------AHL20(2) --------->AHL20(2)  ------>MYB46(1) -------->DOF2--------->AHL20(1)  --------->AHL20(2) --------->At4g35610                          <-- ------YAB1 <---------AHL20(1)<---------AHL20(2)    --------->ANAC58      ----------->GT1        <--- ----TBP   --------->AHL20(2) --------->AHL20(1)    --------->ANAC58      <---------ZAT6         <---   taaaagaattaaaatatatatttattttaaaataaaataaaaaaattaattgataagctaaaccaaatcacatctattgttaaaccgaaatggtccattg  21439900                                  <------ZmHOX2a(2)                                 --------->ARR11(3)                                 <---------ARR14(2)                         --------->LBD16                        <---------ANAC58                        <---------ANAC46                        <---------ANAC58           ---------->DOF2      --------->GLK1(1)                    <------MYB46(1)         <---------TOE2(3)    <------ZmHOX2a(1)                      <------MYB83 --------DOF2          <---------LBD16                              --------->MYB59 ------ANAC58       <---------ANAC58                                <---------TOE2(3)  --------->CCA1(2) ------ANAC58       <---------ANAC58                           ----------->ARR10    ----------->ARR10   cttttgggtttaagaaagttgttcttgcgggaggagatcgagtttttggaatagggtttgatgggaagattaggttttggaatggagagatttggactag  21440000                                                                 --------->ANAC46                                                                 --------->ANAC58                                                                 --------->ANAC58                                                               --------->CCA1(2)                                                              <---------ARR14(2)<------MYB83                                                        --------->ALFIN1        <---------ANAC46  <--                  --------->ARR14(2)                  <---------ANAC46         --------->MYB46(2) <--             <------MYB83                             <---------ANAC58         <---------AtMYB61 ----             ----------->GT1                          --------->ANAC55(2)      --------->MYB55(2)----             <------MYB46(1)                          <---------ANAC55(2)      <---------MYB46(3)----           <---------WOX13(1)           ---------->DOF2 -------------->OsCBT   --------->MYB111(1)<--      <------ZmHOX2a(2)         <---------YAB1        <---------ANAC58         --------->MYB111(2)<--     <---------ARR11(3)      <---------AHL20(2)       <---------ANAC55(1)   --------->ATHB12     ----     --------->ARR11(3)      <---------YAB1         <-----------GT1---------->DOF2              <---- ---------->DOF2  <---------ARR14(2)  <---------HSFB2a(2)     --------->ARR14(2)<------MYB46(1)<-----   aatcaaagatcagattggtgaattctctgatattattgttctcaaagagctaatttacgtgttggatacgaaaggcattgtttggtggattagtatcgtt  21440100                                                      <---------ANAC46 ----MYB46(1)                                    <---------ANAC58 ----MYB83                                       <---------ANAC46 ----->MYB52(2)                                  <---------AtLEC2 ----->MYB111(1)             <---------ANAC46    <---------ANAC58 ----->MYB59                 --------->ALFIN1<-------GAMYB -------ANAC55(2)          <---------ANAC46  <---------ANAC58                                     <-- -------ANAC46            --------->ALFIN1   <---------ANAC58--------->ARR11(3)                   <-- ----->MYB46(2)        ------->TEIL         <---------MYB46(3)  <----------DOF2        ---------->DOF2 -----MYB55(1)      <---------YAB1          <------MYB83<---------ANAC46      ------>ZmHOX2a(2) ----- ----MYB52(1)       <---------ATHB12        <------MYB46(1)  <---------ARR11(3)   <----------DOF2 <--   aggtatggaacttcacttactaatgaatgtggtggagacttaagcttggttgcatgttgtggagagctttatattgttgatcgtctttttaaagagaatg  21440200                                                          <---------LBD16                                                          ------>ZmHOX2a(1)       <---------YAB1           <---------At4g35610                   <---------REM1(1)                ----------------->AGL1           --------->At4g35610                 <------MYB46(1)                   <-----------------AGL1         --------->DAG2                        <------MYB83                    ----------->TGA1        ---------->DOF2                    <-----------RAV1(1) --------->GLK1(1) ====================   ---------->DOF2                        <---------TOE2(3)--------->TOE1(1)   ----------->HVH21 -------ANAC46                  --------->YAB1<---------AtMYB61<---------GLK1(1) <-----------------AG -------ANAC58     <---------ANAC58  <---------YAB1       --------->LBD16    <---------ANAC55(2) ---->ARR11(3)     <---------ANAC46  --------->ICU4 ----------->ARR10        --------->ANAC55(2) -------ANAC58     <---------ANAC58 <---------TOE2(3)<---------At4g35610    <-------TEIL      -------   tcttgaaaagaaaagctgattacttggacttggatgataatgtttatgttggtgtagctcctcggatttctaatgtgatacatgacgattttgggaatga  21440300  Previous    Next  AGI:  At1g57870.1    Description:  shaggy-related protein kinase kappa, putative / ASK-kappa, putative. Identical to Shaggy-related protein kinase delta (ASK4) [Arabidopsis Thaliana] (GB:Q9FVS6); similar to shaggy-related protein kinase kappa / ASK-kappa (ASK10) [Arabidopsis thaliana] (TAIR:AT1G09840.5); similar to shaggy-related protein kinase kappa / ASK-kappa (ASK10) [Arabidopsis thaliana] (TAIR:AT1G09840.6); similar to shaggy-related protein kinase kappa / ASK-kappa (ASK10) [Arabidopsis thaliana] (TAIR:AT1G09840.4); similar to Protein kinase [Medicago truncatula] (GB:ABE91930.1); similar to GSK-3-like protein MsK4 [Medicago sativa] (GB:AAN63591.1); similar to unnamed prot Range:  from: 21434783    to: 21439767    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g57906.1    Description:  ATP-dependent helicase. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G17690.1); similar to unknown [Populus trichocarpa] (GB:ABK93341.1) Range:  from: 21439092    to: 21440475    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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