Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ARR14(2)                                                                  --------->ARR14(2)                                                             ------->TEIL                 <---------ANAC58                                                             --------->MYB52(1)           <---------ANAC58        <------ZmHOX2a(1)        <---------ZAT18            --------->MYB52(1)            <---------ANAC46      <---------TOE2(3)          <---------ZAT14          <---------MYB52(2)          <-------GAMYB ------GLK1(2)                   --------->ZAT14        --------->MYB52(1)           <---------MYB46(3) -->ANAC58            <-----------GT1               ---------->DOF2                  --------->MYB55(2) -->ANAC58       <---------TOE2(3)                --------->ANAC46<---------GLK1(2)  --------->MYB111(2) -->ANAC46 <-------TEIL          --------->ZAT18--------->ANAC46--------->LBD16     <--------P   aatctcataaggatgcattaagttttacaaatgagagcacttctgtatatacacaaaagaacgaaccggattcgacgaattagcaggttgttgcttaatc  21144800                                                               <---------HSFB2a(2)                                                               --------->LBD16                                     --------->ANAC58          --------->HSFB2a(2)                                     --------->ANAC58          ------>ZmHOX2a(1)                                     --------->ANAC46         <---------LBD16                         <-----------------AGL1            --------->ARR14(2)                      --------->GLK1(1)                    <---------ARR14(2)                 -------            ------>ZmHOX2a(1) <---------ATHB12            <---------GLK1(1)          --------->MYB52(1)           --------->TOE1(3) <---------ARR14(2)       --------->LBD16                ------>MYB83           --------->TOE2(3) --------->ARR14(2)      --------->LBD16                 ------>MYB46(1)     <----------DOF2  <---------GLK1(1) --------->ATHB12  --------->GLK1(1)        --------->AtMYB61   ---------->ID1 --------->YAB1 ------>ZmHOX2a(1)   <---------LBD16   --------->AHL20(2)     -------   ttcttgtctttatccttcaatgagagttcccaatcctgcaagtcattgaaaaatccctggaaatcctggaaaaaaaaattcgaaaccaaacgatgcaagt  21144900                                                         --------->MYB52(1)                                                       <---------MYB52(2)                                                   --------->WRKY12                                                 <-------GAMYB                                   <---                          --------->ANAC46      <---------MYB46(3)                           --------                          --------->YAB1        --------->MYB52(2)                     --------->ALFIN1 -->ANAC58                --------->ANAC55(2) <---------MYB52(1)                --------->MYB52(1) -->ANAC58               <-------TEIL    ----------->RAV1(1)                    <---------DOF5.7(2)   aaacatctaattcgttcttagtctatatacataatcgattgtacaacagttcgttgaactaacaatctccatgaaatctagataacgaagtggagataag  21145000                        <----------DOF2                        <---------DAG2          <---------ARR11(3)                     <-----------GT1            --------->ARR11(3) ---ZmHOX2a(1)       ---------->ID1            <---------RVE1(1)           ---------->DOF2 ->CCA1(2)          <-----------GT1     <---------ZAT14           <-------TEIL     ------->TEIL   gagcacgagtcgtttcgatttttttcctttttcattctcgagtaaacagagattttagctagagaagattcatgtaagaaagatgaatcgagtagaaatg  21145100                   <---------ANAC58                   <---------ANAC58                   <---------ANAC46                              --------->ANAC58                  <---------DEAR3(1)                             --------->ANAC58                   <                 ------>NtERF2                               ------>NtERF2                          -                 <------NtERF2                <---------YAB1 --------->LBD16                        <                --------->DEAR3(1)    ------>MYB83          <---------DEAR3(1)                      -               <---------RAP2.6(2)    ------>MYB46(1)      <---------LBD16                    <------              <---------LBD16   --------->WRKY38(1)    --------->GLK1(2)                    ---------             ------>ZmHOX2a(2)  ----------->HVH21     --------->ARR14(2)                   --------->ICU4 ----------->RAV1(2)           <-----------HVH21      <---------GLK1(2)                  ---------->DOF2 <---------ANAC55(2)         <---------DEAR3(1)     ----------->ARR10             ---------->DOF2<---   gttacctgagtttgatcgcggccgtgtttgctcggtgacctagccattctgagagagattctccggcgagcaaatagtcgacgagaaagagcaaagatga  21145200                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                        <-----------HVH21                                                                                       <---------PCF2                                                                                      <------NtERF2                                                                                  <---------ANAC46                                                                                  <-------GAMYB                                                                                  ===================                                                                                 --------->MYB55(2)                                                                                 <---------MYB46(3) ---------HSFB2a(2)                                                             <---------ANAC58 -------->HSFC1(1)                                                              <---------ANAC58 ---------HSFC1(1)                                         ========================================== -------->HSFB2a(2)                                        <---------GLK1(1)    <---------ANAC46   -- ---YAB1                                      <------------CBF   <---------MYB52(1) --------->ALFIN1 >YAB1                                   --------->ZAT14   <----------DOF2    <-----------HVH21    <- ------YAB1    ---------->DOF2      *TSS <---------ZAT14   --------->GLK1(1) <-----------RAV1(1)  ---   ttctagaagaagactgagaaagtcacagagttcaattttgaactacagtattggacttgggctttccgatatttgagtaatgtcgggtggggtcatgtca  21145300                                           <-----------HVH21                                      <-----------HVH21                                     <------MYB46(1)                                     <------MYB83                                    <---------AtMYB61                                    --------->MYB111(2)                                    --------->MYB111(1)                                    <---------MYB46(3)                                    --------->MYB59    ----------->GT1                 --------->MYB46(2)   --------->LBD16                 <---------MYB55(1) <---------LBD16                  <---------MYB52(1) >bZIP60(1)                    ------>ZmHOX2a(2)                                                   <- -bZIP60(1)                  <---------ARR14(2)                                                   <-- >TGA1a                <---------ANAC58   ----------->GT1             ----------->HVH21         <---- =MYC_MYB              <---------ANAC58  <---------DEAR3(2)         <---------MYB52(1)        <------ =bZIP_DOF  ----------->GT1  --------->ARR14(2)              --------->DEAR3(1)      ----------->HVH21 ------->ARR14(2)     <---------MYB46(3) <---------MYB46(3) --------->DEAR3(2)   <---------ANAC46 --- --------ARR14(2)  <------------CBF<--------P             <-----------GT1        <---------ANAC58 <-- -------->HVH21 --------->YAB1<------ZmHOX2a(2)        <---------KAN4(2)         <---------ANAC58----   gtaaccgggttaaatcgataatattggttgagatcgggtaggtcgggtcaaatcgagaataaaccggcccgtttgacacctctacgtgtgaaactgagtc  21145400        <---------ANAC55(2)        --------->At4g35610        ----------->GT1       --------->MYB59      <-----------RAV1(2)    <-----------HVH21  <---------MYB46(3)  <---------DEAR3(2)                                               <---------ANAC46 ----------HVH21                --------->AHL20(2)                 ----------->GT1 -------ZAT2                    <---------AHL20(1)               ------>ZmHOX2a(2) -------RAV1(2)                 --------->AHL20(1)              <------ZmHOX2a(2)                   < -----HVH21                     <---------AHL20(2)    <------ZmHOX2a(2)        ----------->GT1    --- ------>O2                     <---------ATHB12--------->ALFIN1<---------ARR14(2)               <---- -------O2 ---------->DOF2     --------->AHL20(2)   --------->At4g35610   <-----------GT1      ------ ----->MYB59      ----------->GT1        <---------YAB1        --------->ARR14(2)       ----------->GT1   aggtcgggtcaggtaaagaaccgtattaaaccaataaattgatattagtgtgtgagatcaaatcggatcgggtgaataaccaggttaaaccggtaaacac  21145500                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    <---------AGP1                                                                                    --------->AGP1          <---------GLK1(2)                                                         <---------ARR11(3)          --------->ARR14(2)                                                        --------->ARR11(3)          <---------ARR14(2)         <---------GLK1(1)                              --------->ARR14(2)  <-----------RAV1(2)                --------->GLK1(1)      ----------->GT1         <---------ARR14(2) -----------HVH21              ---------->DOF2              <---------ANAC46       <---------CCA1(2) ------>LBD16          <---------ANAC46                    <-----------------------TaNAC69(2) -----LBD16            <---------ANAC58           <----------DOF2       --------->AtMYB61      >>>>>> --->MYB52(1)          <---------ANAC58         *TSS       --------->MYB59     <-----------HVH21   --   cgggtcaggcccgattcgctatgtttcttgagcgaaaggaaatcacagaagtctttttagtgaggtaaacaaaaccaaaaccatcagatcttaagaagaa  21145600                             <---------ARR14(2)                 <---------RVE1(1)                 <---------CCA1(1)        <---------ZAT18      --------->ARR14(2)                                                     <      <---------At4g35610    --------->GLK1(2)      --------->WOX13(1)                          -----   ---------->DOF2       <---------HSFB2a(2)      <------ZmHOX2a(2)                           ------>ZmHOX2a(2) --------->TOE2(3)       --------->HSFB2a(2)     --------->AGP1            <-----------GT1    ======= >>>TBF1--------->ZAT18  --------->HSFC1(1)     <---------At4g35610       <---------YAB1<---------At4g35610 ----->TEIL     --------->ARR11(3)              --------->At4g35610    <---------YAB1<---------At4g35610   gaacctaaagctcactacgatatttttcgagaatatgacgactgtaagtcagatcaatctcgtcttcaatgttcttattactatctctgcttctgatcct  21145700  Previous    Next  AGI:  At1g56440.1    Description:  serine/threonine protein phosphatase-related. similar to ATTOC64-III (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III), binding / carbon-nitrogen ligase, with glutamine as amido-N-donor [Arabidopsis thaliana] (TAIR:AT3G17970.1); similar to unknown [Picea sitchensis] (GB:ABK26202.1); similar to Os05g0129900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054548.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 21142195    to: 21145236    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56450.1    Description:  PBG1 (20S proteasome beta subunit G1); peptidase. Identical to Proteasome subunit beta type-4 precursor (PBG1) [Arabidopsis Thaliana] (GB:Q7DLR9;GB:O23718;GB:Q9C7X3); similar to PBA1 (20S proteasome beta subunit A 1), peptidase [Arabidopsis thaliana] (TAIR:AT4G31300.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21811.1); contains InterPro domain Proteasome, beta-type subunit, conserved site (InterPro:IPR016050); contains InterPro domain Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 21145548    to: 21148065    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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