Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ---------->DOF2                                                                             --------->YAB1                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                    --------->AtMYB61                                                              --------->At4g35610                                                         --------->WOX13(1) <---------ATHB12                                                      --------->ANAC46------>MYB83         ---------->DOF2                              --------->ANAC58------>MYB46(1) ---->DOF2              --------->TOE1(3)        --------->TOE2(2)  <---------ALFIN1 --------AGL15          --------->TOE2(3)        --------->TOE1(2) --------->MYB46(3) ------->AGL15       <-----------GT1  <---------ICU4  --------->ANAC58--------->ANAC46            <--   aggagaatgtagaaagagagatttaaccttggcatagtaatctttccaaaccctacgagcaatctgatgaccacccaaatcaaaagccttgaacttgatt  21091800                                           --------->At4g35610                                        <---------At4g35610                                       ----------->HVH21                                       <---------MYB46(3)                                     <-------GAMYB                                     <------NtERF2                                     ----------->RAV1(2)                                     --------->At4g35610                                     <---------At4g35610                                    <---------DEAR3(2)                                    ------>NtERF2                              ------>MYB83                                    <---------MYB46(3)                   -------->P                                  --------->ATERF1(1)                    ------>MYB46(1)                                 <-----------HVH21                       ------>MYB83                           <-----------RAV1(1)                          ----------->RAV1(1)                        <---------MYB46(3) <---------At4g35610         --------->AtMYB61                    =========================MYC_MYB                   --------->MYB46(3)                    <---------TGA1a<---------DEAR3(1)                 --------->MYB46(3)           --------->ARR11(3)   <---------ANAC46                    --------->AtMYB61           <---------ARR11(3)   <---------ANAC58                 --------->ANAC46         ----------->ARR10 ======================RAV            --------->MYB46(3)   --------->ANAC46 ---------GT1       <---------O2<---------ANAC58            <---------ATHB12   ------>MYB46(1)   tttccaatgctaagttcttcagacgttggatgttgcgtcggctgatgctgaactaatctctaatcaaacaccaccaacaccaaattcacacaaacacaga  21091900                     <-----------GT1                  <---------ICU4            ------>ZmHOX2a(2)           --------->GLK1(1)           <------ZmHOX2a(2)          <---------ARR11(3)          <---------AGP1   --------->AHL20(2)                                    --------->AHL20(2)          --------->AGP1   <---------AHL20(2)                            ------>ZmHOX2a(2)          <---------ARR14(2)                                            <------ZmHOX2a(2)          --------->ARR14(2)              --------->ANAC58             --------->ARR11(3)          --------->ARR11(3)            ---------->DOF2                --------->ARR14(2)         <---------CCA1(2) <---------ATHB12                            <---------ARR11(3)         --------->At4g35610--------->AHL20(2)                         --------->AGP1     <---------ARR14(2)         <---------At4g35610<---------ICU4--------->ANAC58             <---------AGP1     --------->ARR14(2)     <-----------HVH21     <---------ATHB51                    ------->TEIL-------->P --------->YAB1   caaaaaatgtcagatctcaatttttacaaataatttctcatcaaaagcaatgcatagaaggcatgaatcgatagatctaccaaaaaaatgagaattcgaa  21092000                                                                                   <----------DOF2                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                           <----------DOF2                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        --------->ARR14(2)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                        --------->ARR14(3)                                                  <----------DOF2       <---------ARR14(3)                                                <------NtERF2           <-----------ARR10                          ------->MYC3         ------>NtERF2            <---------AGP1             --                 <----------DOF2              --------->ATERF1(2)       --------->AGP1          -----     <---------ATHB12     <-------MYC3        <---------ATERF1(2)       <---------ARR14(2)      -----   gaaactaatcaaacctcgtctttgagcatgtgaagtaatgtagttttgccagcattatcgagaccgagaaacaagatctttgcttctttttgccataacc  21092100                         ------>MYB46(1)                         ------>MYB83                --------->LBD16               <---------ANAC58                        ---------->ID1            ------>ZmHOX2a(2)               <---------ANAC46                      <---------ANAC58          --------->ARR14(2)            --------->GLK1(2)                        <---------ANAC58    --------->ARR11(3)           <---------GLK1(2)                    <------------------------ANAC81<---------ARR11(3)         <---------TOE2(3)                   --------->ANAC55(2)        --------->ZAT14         ----------->ARR10<---------ATHB12   <---------ANAC58      --------->ZAT14    ------->TEIL--------------------->WRI1   <---------ANAC55(2)   <---------ZAT14 ------->MYB52(1)     --------->MYB46(3)     <---------ANAC46   <<<<<<<<<TBF1  <---------ARR14(2) ---->TOE2(3)  <---------ANAC58              <---------ANAC58<<<<<<<<<TBF1     --------->ARR11(3) ---->TOE1(3)  <---------ANAC55(2)         <xxxxxxxxxxxxxxxxxxsmallRNA(se3)------>ZmHOX2a(2)   ctaacgaagctaagattccgtagaaccaatcgaacaagaacatggtttcgtgatttcgtcttcttcttcttcactgatctcgatcttcttcgtttcgatt  21092200                                                                                       <------NtERF2                                                                                     --------->TGA2(1)                                                                                     --------->bZIP60(1)                                                                                     <---------TGA2(1)                                                    <-------MYC4                     <---------ANAC58                                                    ------->MYC4                     <---------ANAC46                                                    -------->ABF1               --------->O2                                                    <-------MYC3                --------->bZIP60(1)                                                    ------->PIF5                <---------O2                                                    ------->MYC2                --------->TGA1a                                                    <-------MYC2                <---------bZIP60(1)                                                    <-------PIF5                <---------bZIP60(2)                                                    ------->MYC3                <---------TGA1a                                               --------->AtMYB61                >>>>>>>>>>HY5                                               <---------ALFIN1                 <---------ANAC46                                              --------->MYB46(3)                <---------ANAC55(1)                                            --------->ARR14(2)                  <---------ANAC58                                           <------ZmHOX2a(1)                    <---------ANAC55(2)                                           ============================HOX2a_HOX2a   <---------bZIP60(1)                                     <---------YAB1--------->TGA1a              =====================                                    --------->AHL20(1)                          --------->ANAC55(2)                                    <---------AHL20(2)                          =====================                                    --------->AHL20(2)                          <---------ANAC58                                    <---------AHL20(1)    <---------At4g35610  ----------->STF1                                   --------->AHL20(2)----------->HVH21       ----------->TGA1                                   <---------AHL20(2)--------->ALFIN1        ----------->HVH21                                   --------->YAB1  <---------O2          --------->ZAT14     --------                               --------->AHL20(2)  <---------TGA1a --------->ZAT2    <---------ANAC58                               --------->AHL20(1)  --------->ANAC55(2)   <---------ZAT14    <--------              <------------CBF <---------AHL20(1)  --------->O2 ------>ZmHOX2a(2)   <------NtERF2              *TSS             <---------AHL20(2)  --------->ANAC46<---------At4g35610<-----------HVH21        ----------->GT1       --------->AHL20(2)  ------------>OsbHLH66 <---------REM1(1) --------->At4g35610  --------->ANAC58            <---------AHL20(2) <---------ALFIN1  <---------ZAT2 --------->ALFIN1  --------->ANAC58      --------->ANAC46 --------->MYB59<---------ANAC46<---------ANAC46  <---------At4g35610   cgaaacgcgaatgtgaaattgcctaaacgaaaataaattatattaggaaccacacgtggccgatgatcgagctggtgtagtgacgtggcgtcatatgagt  21092300                                              <---------AHL20(2)                                              --------->AHL20(2)                                              --------->AHL20(1)                       ----------->RAV1(2)    <---------AHL20(1)      <---------AHL20(2)                      ------>MYB46(1) ------>ZmHOX2a(2)               --------->AHL20(2)       <---------bZIP60(1)           <------ZmHOX2a(2)            <---------YAB1    <-------TEIL      ------>MYB83  --------->ARR11(3)      <---------DEAR3(1)   <--------P    --------->ANAC58   <---------ARR11(3)     --------->At4g35610 <------MYB46(1) --------->ANAC58   <---------ARR14(2)  --------->At4g35610 <------MYB83  ---------->DOF2      --------->ARR14(2)  <---------At4g35610 =========================bZIP_DOF  <---------AGP1     --------->MYB52(1) ===========MYC_MYB   -------->P    --------->AGP1 <-----------GT1--------->ICU4 ->ATHB12  <------------CBF        <---------CCA1(2) --------->MYB46(3)<---------AHL20(2)  --------->AHL20(2) -YAB1 --------->bZIP60(1)     <-----------HVH21   <<<<<<<<<GT-1--------->YAB1   ----------->HVH21   ggaaggttgatgtcattgaaagccaacctggaccatcagatctactaatttattaaccagcggctgtgataattttatgttttctgacatttttaaaata  21092400                                                                       <----------DOF2                                                                      <---------ANAC58                 ----------->GT1                                      <---------ANAC58             <---------ARR14(2)                      <-------GAMYB<---------MYB52(1)              <--             --------->ARR14(2)           <---------ICU4        <---------ANAC58         <---------MYB52(1)          ----------------->AG            --------->ATHB12      <---------ANAC58       ----------->GT1    --------->ARR11(3)               <------ZmHOX2a(2)          <---------ANAC46    --------->MYB52(1)    <-----------ARR10               --------->ARR14(2)<---------ARR14(2)       ------->GAMYB   <-----    <---------ARR11(3)              <---------ARR14(2)<---------MYB52(1)     <---------At4g35610  <--   agctaatatctagcctattcggtttatatgcttaaaccgatccatgatttcattcggttactgatttcgtttgctttgcaactcccaaaccgataatttt  21092500                                                             <---------AHL20(1)                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                             --------->AHL20(1)                                                        <---------YAB1                                                      --------->YAB1          --------->DAG2                          --------->AHL20(2)        <-----------GT1         ---------->DOF2                         <---------AHL20(2)      --------->YAB1       <---------HSFB2a(2)      <---------YAB1   <---------YAB1      <---------HSFB2a(2) -------TOE2(3)          --------->ANAC55(2)  <---------AHL20(1)     --------->HSFB2a(2) ----AHL20(2)            <---------ANAC55(2)  --------->AHL20(1)  <-----------GT1           <-------- -------TOE1(3)        <-----------GT1       --------->YAB1 <---------AHL20(2)              <--------   aaggcaattctaaaagtaagacatatcacgttttattttagtttcaaaaatattatttataaatattttttccagtaataacacattgaatttttaggtt  21092600                           <---------DAG2                      ------>NtERF2                               --------->YAB1                     --------->ANAC46                   <------MYB83                     <---------ALFIN1               --------->ATHB12                                <                    --------->MYB46(3)             <---------YAB1<-------TEIL                <-------                  --------->ANAC46                 <---------TOE2(3)        --------->AHL20(2)     <- -TOE2(3)       <-----------GT1    --------->ARR11(3)   <------MYB46(1)     <---------AHL20(2)<------ -TOE1(3)      <-----------GT1     <---------ARR11(3) <--------P--------->AtLEC2    --------->MYB52(1)   tgggaatttttgcattttttcccccaccaatttttgagatgttttagttgaatatggttggcaaacatgcataactaaaaaaataacaacggatttaaca  21092700  Previous    Next  AGI:  At1g56330.1    Description:  SAR1 (SECRETION-ASSOCIATED RAS); GTP binding. Identical to GTP-binding protein SAR1B (SAR1B) [Arabidopsis Thaliana] (GB:Q01474); similar to ASAR1 (Arabidopsis thaliana secretion-associated RAS super family 2), GTP binding [Arabidopsis thaliana] (TAIR:AT4G02080.1); similar to GTP-binding protein SAR1B (GB:O04267); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain GTP-binding protein SAR1; (InterPro:IPR006687) Range:  from: 21090220    to: 21092214    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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