Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->CCA1(2)                                                                        <---------ARR11(3)                                                                        --------->ARR14(2)       ------------>CBF                                 --------->ARR11(3)  --------->YAB1                         --------->GLK1(2)              --------->ARR11(3)  --------->AHL20(2)                     --------->ARR14(2)       <-----------GT1           --------- <---------AHL20(2)                      <---------ARR14(2)  <---------MYB52(1)        ----------->RAV1(1) ----->GT1          <-----------TBP      ------->TEIL   <---------ARR11(3)   --------->ANAC46     ---   taaataatattcaatgtagagcttatatagaactctaaaaacgaatccaaacttgcaatatctcttagttacaagatatacacaatttgcaacacaaagt  20965900                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)             ---------->DOF2                           ------>ZmHOX2a(1)           --------->LBD16   <---------At4g35610                 <---------HSFB2a(2)                         ------>NtERF2   --------->At4g35610<-----------GT1  --------->HSFB2a(2)                        <---------DEAR3(1) ->DOF2 --------->GLK1(1)<---------ALFIN1 <---------ALFIN1         <-------TEIL  <---------LBD16 ------>At4g35610 <----------DOF2   <-----------GT1    --------->HSFB2a(2)   ------->TEIL --------->GLK1(2)   agctaagcagagttccaaagctttttaccacttcgatttttccagcactcgcttctcctcgatcgaacatacaccgatgaaactccggcgagaatccatg  20966000                      <---------At4g35610                   <---------At4g35610              --------->GLK1(1)              <---------GLK1(1)             --------->ARR14(2)                                            >>>>>>>>>>WRKY6            <------NtERF2                                                  >>>>>>>>>>WRKY11           --------->LBD16                                                --------->WRKY38(1)          --------->ANAC46                                                --------->WRKY45         <---------LBD16                                              --------->DAG2       ------>ZmHOX2a(2)                                        --------->At4g35610      <------ZmHOX2a(2)                               <----------DOF2---------->DOF2     <-----------GT1     --------->ARR11(3)                       <-----------ARR10 ----------->GT1     --------->TOE2(3)     <---------ARR11(3)                  <---------YAB1        --------->GLK1(2)   ----------->GT1   agtataagatcgccggaactcttctgcttcttcttatgcaactctgattatctgcgcttcttgagaagctaaaaagttgactaaaacgtttaaacttctt  20966100                              --------->TOE2(3)                          <----------DOF2                         <---------ANAC58                         <---------ANAC58                    <---------ANAC58                    <---------bZIP60(1)                    --------->O2                    --------->bZIP60(1)                    =================bZIP_DOF                    <---------ANAC58                    =================bZIP_DOF                    <---------O2                    <---------TGA1a                    --------->TGA1a                             ----------->RAV1(1)                    <---------bZIP60(2)                        <---------ALFIN1                    --------->ANAC55(2)                     ------>NtERF2                    <---------ANAC55(2)                    <-----------TCP11(1)                    <---------ANAC55(1)                   --------->MYB59                   ----------->STF1                  <---------TOE2(3)                 ----------->TGA1                   ---------->DOF2                 ----------->HVH21                 --------->AHL20(2)                        --------                <-----------HVH21              --------->ICU4 --------->MYB46(3)          --------->ATHB12               --------->ALFIN1  --------->ATHB12  <---------AHL20(2)                   <---------WOX13(1)    --------->AtLEC2<---------ANAC46         ----------->GT1--------->PCF2     --------->ALFIN1   ---   cttgacatgcagagcaagtgtgacgtgtctttccttcattggattagtagtaattaaagttcggcccaccagaagatggaagtgtgactgaatgattcaa  20966200                                                                                         <-----------GT1                                                                                   <---------ATHB12                                                           --------->AHL20(2)--------->ANAC58    ------------>CBF  <---------AHL20(2)       <---------GLK1(1) <---------HSFB2a(2)     *TSS ---->CBF            --------->AHL20(2)        --------->GLK1(1) --------->HSFB2a(2)<---------ICU4 ------>YAB1 --------->MYB59    <------------CBF          ----------->TBP    --------->ANAC58    <---   tctgaattcaatagttaggcccatttaataggcccattgatatagtgggaaaccctagctataaattcgagaggctctcactcaaatcatttctctcttc  20966300                ------->TEIL                <---------ARR14(2)                --------->ARR14(2)                <---------ARR11(1)                                           <<<<<<<<<TBF1                <-----------ARR10                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                --------->GLK1(2)                                      <<<<<<<<<TBF1       <---------GLK1(1)                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->HSFB2a(2)                                          <---------ARR11(3)    <<<<<<<<<TBF1   <---------HSFB2a(2)                                        ----------->ARR10 <<<<<<<<<TBF1 <---------HSFB2a(2)                                      ----------->GT1 <<<<<<<<<TBF1  <<<<<<<<<TBF1 --------->HSFB2a(2)                             --------->YAB1 --------->ARR11(3) <<<<<<<<<TBF1 -------DOF2   <---------ARR14(1)   --------->MYB46(3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   tttctcgagaaatcggcgaatctgagaactaagcatcaacaacaagaacaatgagagcgaaggtaacatcttcttcttcttcttcttcttcttcttcgat  20966400                                                                           --------->ANAC46                                                                          <-------TEIL                                 --------->MYB52(2)                     <---------ARR14(2)                               <---------MYB52(1)                 <-------TEIL                              --------->TOE2(3)                  --------->CCA1(2)                             <---------ZAT6                     --------->ARR14(2)                             <---------ANAC58                   <---------ARR14(2)                      --------->ICU4 <-------TEIL     <---------ATHB12  --------->ARR14(2)         <----------DOF2     <---------ANAC58--------->YAB1   ----------->GT1                 <------   tcaatattgttctttgtattagaacttattagcgttagtttcatcgataatacccattcatgtatggatacacatatacgtagagagagatagatgttac  20966500                                                      <------ZmHOX2a(1)                                                 ------>ZmHOX2a(2)                                                --------->CCA1(2)                                                =============HOX2a_HOX2a                                                <------ZmHOX2a(2)                                               --------->ARR14(3)                                               <-----------ARR10                                               <---------AGP1                                               --------->GLK1(2)                                               --------->ARR11(3)                                     <---------SPL7 <---------TOE2(3)                                   --------------->AtSPL3  <---------YAB1                               ---------->DOF2 <---------ARR14(2)                          ==============================HOX2a_HOX2a                          =============================HOX2a_HOX2a                          ------>ZmHOX2a(1)    --------->ARR14(2)                         --------->TOE2(3)     <---------ARR11(3)                        <---------YAB1      --------->AtLEC2   --------->TOE1(3)   ----------->ARR10                         --------->YAB1 -----GT1   ----------->GT1    --------->ZAT14 <---------ARR14(3)                     <---------YAB1   attctacaatgcaaatgttatatatatccttagtaaagtcgtacaagaagatctgaggattatgtttttgacattagaacaattgaaaatgataatcgat  20966600                                           --------->GLK1(2)                                          <---------GLK1(2)                            <---------HSFB2a(2)                                    ---------->DOF2                        --------->MYB46(3)                                  <---------RAP2.6(3)                      --------->HSFC1(2)                                 --------->RAP2.6(2)               --------->ATHB12    --------->HSFB2a(2)             <---------AHL20(2)  ----------->GT1          <------MYB46(1)  <---------HSFC1(2)         <---------ZAT6   --------->HSFB2a(2)             <------MYB83     --------->HSFB2a(1)         ----------->GT1  <---------HSFB2a(2)         <-----------RAV1(1)  <---------HSFB2a(1)   tttgcatcccactgttaaatttgttgtactggaagccgtaaagagattctgaaaaaatgttggtaatctcgattggaaccatctctgtgccagaaaactc  20966700                                           <---------TOE2(3)                                   ----------->GT1                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               --------->ARR14(3)                                              <-----                               <---------ARR14(3)                                           ---------                               <---------ARR11(3)                                        <----------DOF2                               --------->ARR14(2)     <-------GAMYB                  <---------CCA1(2)                               <---------ARR14(2)    <---------MYB46(3)          <---------ANAC58                               --------->AGP1        --------->MYB111(2)         <---------ANAC46                               --------->ARR11(3)<---------TOE1(3)               <---------ANAC58                              <---------GLK1(1)  <---------TOE2(3)            <-----------RAV1(1)   acttactactggtttatctaaactatagatagagatcttgttatataggttaaggttgttgaaatgaaaactctccatttatgtcgtgtttctttcatca  20966800  Previous    Next  AGI:  At1g56045.1    Description:  ribosomal protein L41 family protein. contains InterPro domain Ribosomal protein L41; (InterPro:IPR007836) Range:  from: 20966289    to: 20967129    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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