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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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         <------ZmHOX2a(1)
  <-------GAMYB                        <---------MYB52(1)                       <---------MYB52(1)
-------DOF2                       -------->P<---------WOX13(1)                ----------->GT1
------DAG2      <----------DOF2   <-----------GT1                      <---------HSFB2a(2)        <-
>ZmHOX2a(1)     <---------DAG2   <-----------GT1                       --------->HSFB2a(2)       ---
 
tttttcgttgaaggactaacttttttcaagagagatttacccgttcgattgctactggtcttagtttcttcttactcgaactcgttattctcttcttggt  20427700
                                                                 <---------AHL20(2)
                                                                <---------AHL20(1)        <------ZmHOX2a(2)
                                                                --------->AHL20(1)       <---------ARR11(3)
                                                              --------->AHL20(1)         --------->ARR14(2)
                        <---------ZAT18                       <---------AHL20(1)         <---------ARR14(2)
                        --------->ZAT18                    --------->AHL20(2)            --------->ARR11(3)
  <---------ANAC46     <---------ANAC58                  <---------ARR11(3)             <------ZmHOX2a(1)
  <---------ANAC58     <---------ANAC58                  --------->ARR11(3)    <-------MYC2
  <---------ANAC58   --------->ALFIN1                ---------->DOF2           <-------MYC3
---------DOF2      <---------ANAC58            ----------------->AGL3          ------->MYC3
------>MYB52(2)    <---------ANAC58    <-------TEIL <---------AHL20(2)         ------->MYC2------>ZmHOX2a(2)
 
tctttgcttgttcccatctatagagtgtgtgcttcagatagtttcatagacctattaaaagataatatatatttgcaatgcatatgctctaggatcttaa  20427800
                              ----------->GT1                                          --------->ANAC58
                ------------------------>ANAC81                              --------->AHL20(2)
    --------->YAB1          ---------->DOF2                             --------->MYB46(3)
   <---------ATHB12    ---------->DOF2      ---------->DOF2           <-----------GT1  --------->ANAC58
 
attcaaatcaaaactaaaaatacaaaaaaagaaaagaaaaaacaaaaaaaagaagacataaacctagttgtttaaaccactaaaatacaaacgcataaac  20427900
                                                                                         <----------
                                                  <---------AHL20(2)                     --------->YAB1
                                                 --------->AHL20(1)                 --------->AHL20(2)
                                                 <---------AHL20(1)          --------------->AGL15
                                      <----------DOF2        <-----------GT1<-----------GT1        <
                        --------->TOE1(2)       <---------AHL20(2)     <---------DAG2<---------AHL20(2)
                        --------->TOE2(2)     --------->AHL20(2)       <----------DOF2--------->YAB1
 
ttactacacatgaaaatgaaacgactacatacgactgactactttgcatatatatatttgtgaattactcttcactttttctctatatataataacaact  20428000
                           <---------CCA1(2)              ------>ZmHOX2a(2)
                         <---------DAG2                  <------ZmHOX2a(2)
                         --------->TOE1(3)               --------->GLK1(1)
                         --------->TOE2(3)               <---------GLK1(1)
                 <---------AHL20(2)                     <---------ARR11(3)
                 --------->AHL20(2)                     --------->ARR11(3)
                 --------->AHL20(1)      --------->AHL20(2)
                 <---------AHL20(1)      <---------ARR11(3)                      <----------DOF2
   ---------->DOF2    <-----------GT1    <---------AHL20(1)                    ---------->ID1
-GT1        --------->AHL20(2)           --------->AHL20(1)                <----------DOF2
----------ID1 --------->YAB1 <---------CCA1(2)  --------->ARR11(3)--------->MYB46(3)    *TSS
 
tgaagacaaagacaaaataataaaataaccttatctcttctctatatattagttcttgagatctctccaacaactctactttgtctttactcaagtattt  20428100
                          ----------->GT1                           --------->LBD16
                        ---------->DOF2              ------->TEIL   ------>ZmHOX2a(1)
                    --------->DAG2          --------->GLK1(1)     ----------->RAV1(2)           ----
              --------->YAB1            <------ZmHOX2a(1) --------->GLK1(2)                   ------
   ---------->DOF2 ---------->DOF2     ----------->GT1<---------At4g35610              ---------->DOF2
 
cactaagaaagatagaatcacaaaaaggaaagagaaaatgagaggagaaatcgatgaagctaatcttgctcctgaaacttcacttattaacaaagagaat  20428200
                                                    --------->ARR14(2)
                                                    <---------ARR14(2)       <---------ZAT2
                --------->YAB1                   <---------ANAC58            <---------At4g35610
          ------>NtERF2                          <---------ANAC58            --------->ZAT2
      <---------DEAR3(1)                <----------DOF2             <----------DOF2      <---------YAB1
----->YAB1----------->RAV1(1)           <---------DAG2        <----------DOF2--------->At4g35610
--->GLK1(2)<------NtERF2             <---------ALFIN1 <---------ANAC46     <-----------RAV1(2)
 
caagactcatcggcgacaataacaactactctcttgctcaccacttttgtagccgtgtctggttcctttgtctttggctcagctgtgagtttacaattac  20428300
                                                                                             -------
                                                                                        <---------ICU4
                                                                                        --------->YAB1
                                                                                       <-------TEIL
                             <---------ANAC46                                       --------->GLK1(1)
                           <---------ANAC46                                        --------->ARR14(2)
                         <---------ZAT14                                           <---------ARR11(3)
                         <-------GAMYB       --------->TOE2(3)                     --------->ARR11(3)
      <----------DOF2 <---------ANAC46       --------->YAB1                        <---------ARR14(2)
     <---------ANAC58 <---------ANAC58     ------->TEIL                           <------ZmHOX2a(1)
     <---------ANAC58 <---------ANAC58    <---------CCA1(2)  <-------GAMYB    <---------ARR14(2)  <-
<---------ICU4--------->ANAC55(2) <---------ANAC46          <---------ANAC46  --------->ARR14(2)  --
 
taatttttgcttttgttcagtaattgtgtgttgtgttttgtgtttgaatcttaatttctaatttcgttgaaaattttggcagataggatattcatcacct  20428400
                                                                          <---------AHL20(1)
                                                                      <---------AHL20(2)
                                                                      --------->AHL20(2)
                                                           <---------AHL20(2)<---------YAB1
                                                      --------->AHL20(2)  <---------AHL20(2)
          <-----------GT1                             <---------AHL20(1)  --------->AHL20(1)
      <-----------ARR10 ------->TEIL             <---------MYB52(1)<----------DOF2
---->RAV1(2)--------->MYB46(3)                 ----------->GT1   ---------->ID1                    <
--------ZAT14--------->TOE2(2)        <------NtERF2   <---------AHL20(2)  --------->AHL20(2)       <
------->ZAT14--------->TOE1(2) <-----------RAV1(1)<------------------------ANAC81         <XXXXXXXXX
 
gttcagtcggatttaaccaaggagttgaatctctctgtggcagaggtaaactgttattttatttttttgtcttttaatttattatgccatatgtttttgt  20428500
          <------MYB46(1)
          ----------->GT1
          <------MYB83
          <---------ANAC55(2)
         --------->MYB59
      <---------STY1(2)
  --------->STY1(2)                                                     --------->YAB1
  <---------STY1(2)                                                  --------->WOX13(1)
---------ANAC58                              <---------ZAT14       <---------ATHB12
---------ANAC58                   <-----------GT1<---------ZAT6------>ZmHOX2a(2)    <---------TOE2(3)
XXXXXXXXXXXMIR851-3P        <-------TEIL<---------ANAC46<-----------GT1<---------ATHB12
 
ttgctagctagataggtaaaatatacttaagtacatttaacttatgtgtatagtattagttactgatctaatcaatgagtatggattgaggcagtagttt  20428600
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AGI:  At1g54730.1   
Description:  sugar transporter, putative. similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT5G18840.1); similar to ERD6 (EARLY RESPONSE TO DEHYDRATION 6), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G08930.1); similar to ERD6 (EARLY RESPONSE TO DEHYDRATION 6), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G08930.2); similar to General substrate transporter; Sugar transporter superfamily [Medicago truncatula] (GB:ABN09011.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain
Range:  from: 20428089    to: 20429576    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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