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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ZAT2
--------->
ZAT2
--------->
At4g35610
<------
NtERF2
--------->
RAP2.3(1)
<---------
DEAR4(2)
<---------
ATERF1(1)
<---------
RAP2.3(1)
<---------
DEAR3(1)
--------->
ATERF1(1)
<------
ZmHOX2a(1)
--------->
DEAR3(1)
--------->
LBD16
----------->
HVH21
<---------
LBD16
<----------
DOF2
--------->
At4g35610
--------->
MYB52(1)
------>
ZmHOX2a(2)
<---------
ZAT2
<---------
At4g35610
------->
ARR11(3)
--------->
At4g35610
<---------
ANAC46
<---------
ALFIN1
--------
ARR11(3)
--------->
YAB1
<---------
At4g35610
<---------
ZAT18
<---------
ARR14(2)
<
----->
RAV1(2)
--------->
GLK1(2)
--------->
At4g35610
--------->
ZAT18
--------->
ARR14(2)
----
tgatctttaagctcgtgagaatcagaagagagggaagcagcgacggaggcgctagctgagcgaacaccggaggaagcagttctgatgcaagtagagatga
20424300
<---------
ICU4
<---------
ARR11(3)
--------->
ANAC58
--------->
ARR11(3)
<---------
WRKY18(1)
<---------
TOE2(3)
--------->
ICU4
--------->
YAB1
--------->
WRKY38(1)
==================================================================================================
<-----------------
AGL1
<---------
ICU4
<---------
YAB1
<---------
TOE2(3)
<-----------------
AG
<---------
MYB52(1)
--------->
YAB1
<---------
MYB46(3)
-----------
<-----------
GT1
--------->
DAG2
--------->
ICU4
<---------
ICU4
<---------
MYB52(1)
<----------
---------
AHL20(2)
--------->
ANAC58
<---------
YAB1
--------->
ICU4
<---------
MYB46(3)
<-----------
GT1
--->
TEIL
---------->
DOF2
<---------
YAB1
--------->
ICU4
<-------
GAMYB
--------->
WRKY12
<
attttaacgaattgggcaaaaagccattagtaccattattcttcgtttgattatgattatctccgttgttgttgatgttgaccttggagttactcttcat
20424400
<------
NtERF2
--------->
ATERF1(1)
<---------
ERF1
------>
NtERF2
<---------
DEAR4(2)
<---------
RAP2.3(1)
<---------
ORA47(2)
<---------
ATERF1(1)
--------->
ATERF1(2)
--------->
DEAR3(1)
<---------
RAP2.3(2)
<---------
ATERF1(2)
<---------
DEAR3(1)
<---------
RAP2.3(3)
--------->
RAP2.3(1)
<------
NtERF2
<---------------------
WRI1
<---------
ABI4(1)
--------->
ATERF1(1)
<---------
LBD16
<---------
ORA47(2)
<-------
TEIL
------>
NtERF2
--------->
CCA1(2)
<---------
DEAR4(2)
--------->
ARR14(2)
<---------
ATERF1(1)
<---------
YAB1
<---------
ARR14(2)
<---------
RAP2.3(1)
--------->
YAB1
--------->
GLK1(1)
<---------
DREB2C(2)
<---------
ICU4
<---------
LBD16
--------->
ATERF1(2)
-------->
HAHB4
--------->
MYB52(1)
------>
ZmHOX2a(2)
--------->
LBD16
--------->
ICU4
--------->
AtMYB61
<------
ZmHOX2a(2)
<---------
RAP2.3(3)
<---------
ATHB51
--------->
ARR11(3)
------->
GAMYB
<---------
ATERF1(2)
=====
MADS_MADS
--------->
ARR14(2)
<---------
MYB52(2)
<---------
RAP2.3(2)
---->
AGL15
<---------
ARR11(3)
--------->
MYB46(3)
--------->
DEAR3(1)
----
-----
AGL15
<---------
ARR14(2)
--------->
LBD16
--------->
MYB52(1)
<---------
DEAR3(1)
>>>>>>>
---------
ICU4
<---------
ANAC46
--------->
LBD16
--------->
MYB52(1)
<---------
LBD16
>>>>>>>>>
TBF1
agtaattatgaattcttcgtggaagataccaccggagatacaccggagaagagacaacgatcggaaacagcataagccggcggcgatttcgaagaagaag
20424500
<---------
ANAC46
<---------
ANAC58
--------
<---------
ANAC58
--------
<---------
MYB46(3)
--------
<---------
AHL20(2)
<---------
AtMYB61
--------
---------->
DOF2
<-------
GAMYB
--------
<---------
ANAC55(2)
--------------->
AGL15
--------->
ALFIN1
<--------
----->
YAB1
--------->
AHL20(2)
<---------------
AGL15
<---------
DEAR3(1)
<---------
REM1(2)
>>
TBF1
----------->
GT1
<----------
DOF2
<---------
TOE2(3)
<-----------
GT1
>>
aataagtaaagagattgtttaatttgagaaattttgaagctttgccattttttggtaattggggttaagcggtggtgtgttttttgaccttcttcacgga
20424600
<----------
DOF2
>>>>>>>>>
TBF1
<---------
DAG2
>>>>>>>>>
TBF1
--------->
ICU4
<---------
ANAC58
->
ANAC55(1)
<---------
YAB1
<---------
ANAC58
->
ANAC46
--------->
YAB1
<----------
DOF2
->
ANAC58
--------->
ICU4
--------->
MYB52(2)
->
ANAC55(2)
<---------
YAB1
--------->
MYB52(1)
<------
->
ANAC58
--------->
YAB1
<---------
ARR14(2)
<-------
-
LBD16
<---------
YAB1
--------->
ARR14(2)
<---------
MYB52(1)
<-------
>>>>>>>
TBF1
--------->
ICU4
----------->
ARR10
<------------------------
ANAC81
<------
agaagaagaagaagcgaagaagatgatgatgatgatggagaagaaacggttctttgcttttttttggtttctgttttttttttttttttgggtttgcttt
20424700
<---------
TOE2(3)
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
<---------
RAP2.6(2)
*
TSS
---------->
ID1
<---------
At5g28300
----
DOF2
<-----------
RAV1(1)
<-----------
GT1
--
ANAC58
<----------
DOF2
--------->
MYB52(2)
--------->
ANAC46
------
--
ANAC58
<----------
DOF2
<---------
MYB52(1)
<------
MYB83
---------->
DOF2
----------
---
DAG2
<----------
DOF2
<---------
ANAC46
<------
MYB46(1)
--------->
TOE2(3)
------>
ZmHOX2a(1)
tt
gttttgttctttgggcctttgtggctttaagttttagttagttttgttttgtctatttggtttttgagtaaaacttaaaagtcactgtcctaaaagaa
20424800
--------->
ATERF1(1)
<------
NtERF2
<---------
ANAC58
<---------
ANAC46
<---------
ICU4
<---------
ANAC58
--------->
ANAC58
<---------
YAB1
---------->
ID1
--------->
ANAC58
--------->
ICU4
--------->
ZAT14
<---------
WOX13(1)
<---------
AHL20(2)
<---------
AtLEC2
<---------
At5g28300
<<<<<<<<<
RAP2.2
--------->
ANAC58
<---------
ANAC46
<---
---->
DOF2
<----------
DOF2
<---------
TOE2(3)
--------->
ANAC58
<---------
ANAC58
<----
>
DOF2
<---------
ZAT14
<---------
LBD16
<---------
ANAC46
--------->
AHL20(2)
<---------
ANAC58
<-------
agagttactgtagtgctttggcgtctacgggtgttttagattgctgtgtaagcaaacaattttttgtattttttatctcgtgcatgttcacattattacc
20424900
<---------
YAB1
<---------
WOX13(1)
--------->
YAB1
--------->
ATHB12
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
<--
<---------
ICU4
--------->
AHL20(2)
------>
ZmHOX2a(2)
<--
<---------
AHL20(2)
------>
MYB46(1)
<------
ZmHOX2a(2)
---
--------->
AHL20(2)
------>
MYB83
<---------
ARR11(3)
<---
-------
DOF2
----------->
GT1
--------->
ANAC46
--------->
AGP1
<----
-----
DAG2
--------->
ICU4
<---------
ICU4
<---------
WOX13(1)
--------->
ARR11(3)
-----
----
GT1
----------->
GT1
--------->
WOX13(1)
--------->
ATHB12
<---------
AGP1
<---------
TOE2(3)
tttttttttgggaatgtttaaatattatcattcaaaaattacaccaaattgattaattgaatcaacaatagatctatttattgtttaagaaatgtagaga
20425000
-----
<-----------
HVH21
<---------
TGA1a
--------->
TOE2(3)
--------->
ANAC58
--------->
YAB1
<---------
ANAC46
--------->
O2
--------->
ANAC58
<------
MYB46(1)
--------->
ANAC55(1)
--------->
ANAC58
<------
MYB83
--------->
ANAC58
-------
ANAC58
<---------
ANAC55(2)
================
-------
ANAC58
--------->
ANAC55(2)
--------->
bZIP60(2)
--->
ZmHOX2a(2)
<-----------
GT1
--------->
ATHB51
--------->
TGA1a
---
ZmHOX2a(2)
<---------
MYB46(3)
<---------
AHL20(2)
--------->
ANAC46
-----
ARR11(3)
------>
ZmHOX2a(1)
<---------
ANAC46
----------------------->
TaNAC69(2)
---->
ARR11(3)
--------->
AHL20(2)
--------->
MYB52(2)
<---------
YAB1
<---------
AtLEC2
tcgtgcaagcttaatgttccatataatataggtcctagggctagttgttacttatttggtgtataattgaaataggttttagtttgcacgtcacaactca
20425100
----------->
GT1
<-
--------->
ANAC58
---------->
DOF2
--------->
ATHB12
<--
--------->
ANAC58
---------->
DOF2
--------->
MYB46(3)
<--
----->
DOF2
======================================================================
======
bZIP_DOF
----------------->
AGL3
--------->
AtMYB61
--------->
MYB52(1)
<---------
ATHB12
aagaaaatcaaggcatccctcaggcctaagccttccatgtttagacccatttgcaccaaagcagttaatgcccaacgactagtgatttgggtaatcaatt
20425200
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AGI:
At1g54710.1
Description:
AtATG18h (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) h). similar to AtATG18g (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) g) [Arabidopsis thaliana] (TAIR:AT1G03380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22449.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80611.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68597.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680)
Range:
from: 20420437
to: 20424702
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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