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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                  <---------ZAT2
                                                  --------->ZAT2
                                                  --------->At4g35610
                                            <------NtERF2
                                            --------->RAP2.3(1)
                                           <---------DEAR4(2)
                                           <---------ATERF1(1)
                                           <---------RAP2.3(1)
                                          <---------DEAR3(1)
                                         --------->ATERF1(1)        <------ZmHOX2a(1)
                                    --------->DEAR3(1)          --------->LBD16
                                    ----------->HVH21         <---------LBD16
 <----------DOF2                --------->At4g35610          --------->MYB52(1)
------>ZmHOX2a(2)               <---------ZAT2    <---------At4g35610
------->ARR11(3)    --------->At4g35610<---------ANAC46     <---------ALFIN1
--------ARR11(3)  --------->YAB1<---------At4g35610      <---------ZAT18   <---------ARR14(2)      <
----->RAV1(2)   --------->GLK1(2)  --------->At4g35610   --------->ZAT18   --------->ARR14(2)   ----
 
tgatctttaagctcgtgagaatcagaagagagggaagcagcgacggaggcgctagctgagcgaacaccggaggaagcagttctgatgcaagtagagatga  20424300
                       <---------ICU4                 <---------ARR11(3)
                 --------->ANAC58                     --------->ARR11(3)   <---------WRKY18(1)
  <---------TOE2(3)   --------->ICU4              --------->YAB1          --------->WRKY38(1)
  ==================================================================================================
  <-----------------AGL1        <---------ICU4   <---------YAB1       <---------TOE2(3)
  <-----------------AG<---------MYB52(1)       --------->YAB1 <---------MYB46(3)         -----------
 <-----------GT1--------->DAG2 --------->ICU4  <---------ICU4<---------MYB52(1)          <----------
---------AHL20(2)--------->ANAC58 <---------YAB1 --------->ICU4  <---------MYB46(3)   <-----------GT1
--->TEIL       ---------->DOF2 <---------YAB1 --------->ICU4<-------GAMYB --------->WRKY12         <
 
attttaacgaattgggcaaaaagccattagtaccattattcttcgtttgattatgattatctccgttgttgttgatgttgaccttggagttactcttcat  20424400
                                                                              <------NtERF2
                                                                              --------->ATERF1(1)
                                                                             <---------ERF1
                                                                             ------>NtERF2
                                                                             <---------DEAR4(2)
                                                                             <---------RAP2.3(1)
                                                                             <---------ORA47(2)
                                                                             <---------ATERF1(1)
                                                                            --------->ATERF1(2)
                                                                            --------->DEAR3(1)
                                                                            <---------RAP2.3(2)
                                                                            <---------ATERF1(2)
                                                                            <---------DEAR3(1)
                                                                            <---------RAP2.3(3)
                                                                           --------->RAP2.3(1)
                                                                           <------NtERF2
                                                                           <---------------------WRI1
                                                                           <---------ABI4(1)
                                                                           --------->ATERF1(1)
                                      <---------LBD16                     <---------ORA47(2)
                                   <-------TEIL                           ------>NtERF2
                                  --------->CCA1(2)                       <---------DEAR4(2)
                                 --------->ARR14(2)                       <---------ATERF1(1)
    <---------YAB1               <---------ARR14(2)                       <---------RAP2.3(1)
  --------->YAB1                --------->GLK1(1)                        <---------DREB2C(2)
  <---------ICU4           <---------LBD16                               --------->ATERF1(2)
  -------->HAHB4          --------->MYB52(1)             ------>ZmHOX2a(2)--------->LBD16
 --------->ICU4          --------->AtMYB61              <------ZmHOX2a(2)<---------RAP2.3(3)
 <---------ATHB51    --------->ARR11(3)               ------->GAMYB      <---------ATERF1(2)
=====MADS_MADS       --------->ARR14(2)              <---------MYB52(2)  <---------RAP2.3(2)
---->AGL15           <---------ARR11(3)              --------->MYB46(3)  --------->DEAR3(1)     ----
-----AGL15           <---------ARR14(2) --------->LBD16--------->MYB52(1)<---------DEAR3(1)  >>>>>>>
---------ICU4<---------ANAC46--------->LBD16       --------->MYB52(1)   <---------LBD16   >>>>>>>>>TBF1
 
agtaattatgaattcttcgtggaagataccaccggagatacaccggagaagagacaacgatcggaaacagcataagccggcggcgatttcgaagaagaag  20424500
                                                                       <---------ANAC46
                                                                       <---------ANAC58     --------
                                                                       <---------ANAC58     --------
                                                                     <---------MYB46(3)     --------
               <---------AHL20(2)                                   <---------AtMYB61       --------
   ---------->DOF2                                         <-------GAMYB                    --------
<---------ANAC55(2)                      --------------->AGL15      --------->ALFIN1       <--------
----->YAB1     --------->AHL20(2)        <---------------AGL15      <---------DEAR3(1)   <---------REM1(2)
>>TBF1     ----------->GT1          <----------DOF2      <---------TOE2(3)       <-----------GT1  >>
 
aataagtaaagagattgtttaatttgagaaattttgaagctttgccattttttggtaattggggttaagcggtggtgtgttttttgaccttcttcacgga  20424600
                                                     <----------DOF2
    >>>>>>>>>TBF1                                    <---------DAG2
 >>>>>>>>>TBF1              --------->ICU4          <---------ANAC58
->ANAC55(1)                 <---------YAB1          <---------ANAC58
->ANAC46                  --------->YAB1        <----------DOF2
->ANAC58                 --------->ICU4        --------->MYB52(2)
->ANAC55(2)              <---------YAB1 --------->MYB52(1)                                   <------
->ANAC58               --------->YAB1  <---------ARR14(2)                                   <-------
-LBD16                <---------YAB1   --------->ARR14(2)            <---------MYB52(1)     <-------
>>>>>>>TBF1           --------->ICU4 ----------->ARR10        <------------------------ANAC81<------
 
agaagaagaagaagcgaagaagatgatgatgatgatggagaagaaacggttctttgcttttttttggtttctgttttttttttttttttgggtttgcttt  20424700
                           <---------TOE2(3)
                       <----------DOF2
                      <---------ANAC58
                      <---------ANAC58
                   <---------RAP2.6(2)
 *TSS              ---------->ID1                                                <---------At5g28300
----DOF2         <-----------RAV1(1)                                            <-----------GT1
--ANAC58       <----------DOF2       --------->MYB52(2)                      --------->ANAC46 ------
--ANAC58      <----------DOF2      <---------MYB52(1)   <------MYB83       ---------->DOF2----------
---DAG2<----------DOF2<---------ANAC46                  <------MYB46(1)--------->TOE2(3)------>ZmHOX2a(1)
 
ttgttttgttctttgggcctttgtggctttaagttttagttagttttgttttgtctatttggtttttgagtaaaacttaaaagtcactgtcctaaaagaa  20424800
                   --------->ATERF1(1)
                   <------NtERF2
                 <---------ANAC58
                 <---------ANAC46                                                        <---------ICU4
                 <---------ANAC58             --------->ANAC58                          <---------YAB1
                ---------->ID1                --------->ANAC58                          --------->ICU4
     --------->ZAT14                <---------WOX13(1)  <---------AHL20(2)    <---------AtLEC2
  <---------At5g28300             <<<<<<<<<RAP2.2 --------->ANAC58        <---------ANAC46      <---
---->DOF2   <----------DOF2      <---------TOE2(3)--------->ANAC58        <---------ANAC58     <----
>DOF2<---------ZAT14  <---------LBD16   <---------ANAC46--------->AHL20(2)<---------ANAC58  <-------
 
agagttactgtagtgctttggcgtctacgggtgttttagattgctgtgtaagcaaacaattttttgtattttttatctcgtgcatgttcacattattacc  20424900
                       <---------YAB1               <---------WOX13(1)
                     --------->YAB1               --------->ATHB12        <---------AHL20(2)
                    <---------YAB1               <---------AHL20(2)      --------->AHL20(2)      <--
                  <---------ICU4                 --------->AHL20(2)  ------>ZmHOX2a(2)           <--
              <---------AHL20(2)          ------>MYB46(1)           <------ZmHOX2a(2)            ---
              --------->AHL20(2)          ------>MYB83             <---------ARR11(3)           <---
-------DOF2----------->GT1             --------->ANAC46            --------->AGP1              <----
-----DAG2 --------->ICU4        <---------ICU4  <---------WOX13(1) --------->ARR11(3)          -----
----GT1   ----------->GT1--------->WOX13(1)   --------->ATHB12     <---------AGP1  <---------TOE2(3)
 
tttttttttgggaatgtttaaatattatcattcaaaaattacaccaaattgattaattgaatcaacaatagatctatttattgtttaagaaatgtagaga  20425000
                                                                                               -----
                                                                                     <-----------HVH21
                                                                                    <---------TGA1a
     --------->TOE2(3)                                                              --------->ANAC58
     --------->YAB1                                    <---------ANAC46             --------->O2
   --------->ANAC58                                  <------MYB46(1)                --------->ANAC55(1)
   --------->ANAC58                                  <------MYB83                   --------->ANAC58
-------ANAC58                                 <---------ANAC55(2)                   ================
-------ANAC58                                 --------->ANAC55(2)                   --------->bZIP60(2)
--->ZmHOX2a(2)                              <-----------GT1 --------->ATHB51        --------->TGA1a
---ZmHOX2a(2)                            <---------MYB46(3)<---------AHL20(2)       --------->ANAC46
-----ARR11(3)                  ------>ZmHOX2a(1)     <---------ANAC46  ----------------------->TaNAC69(2)
---->ARR11(3)     --------->AHL20(2)  --------->MYB52(2)   <---------YAB1         <---------AtLEC2
 
tcgtgcaagcttaatgttccatataatataggtcctagggctagttgttacttatttggtgtataattgaaataggttttagtttgcacgtcacaactca  20425100
                                                                            ----------->GT1       <-
      --------->ANAC58                                        ---------->DOF2  --------->ATHB12  <--
      --------->ANAC58                               ---------->DOF2   --------->MYB46(3)        <--
----->DOF2                    ======================================================================
======bZIP_DOF                ----------------->AGL3--------->AtMYB61--------->MYB52(1)   <---------ATHB12
 
aagaaaatcaaggcatccctcaggcctaagccttccatgtttagacccatttgcaccaaagcagttaatgcccaacgactagtgatttgggtaatcaatt  20425200
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AGI:  At1g54710.1   
Description:  AtATG18h (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) h). similar to AtATG18g (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) g) [Arabidopsis thaliana] (TAIR:AT1G03380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22449.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80611.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68597.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680)
Range:  from: 20420437    to: 20424702    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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