Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ---------->DOF2                                            ----------------                     ----------->GT1                                               <----------DOF2---                    --------->ANAC46                                              <---------ANAC58---                    --------->ANAC58                                              <---------ANAC58---                    --------->ANAC58                                          <---------ANAC58    ---                  --------->TOE1(2)    --------->AHL20(2)                     <---------ANAC58    ---                 ------>ZmHOX2a(2)   <----------DOF2                        --------->GLK1(2)    <---          --------->MYB52(1)   ---------->DOF2           <---------GLK1(1) <---------GLK1(2)    <----   tttgtgctaaacaaactgatccaaggaaaaaagaaaagcctttaaataatacaagttggaatccctgtgtctctagagattcttgctttcatgttttttc  20286700          ---------->DOF2         <---------ICU4         --------->YAB1        <---------ATHB51  --------->At4g35610 ------->TEIL                                                   <----------DOF2 ------->TaNAC69(2)                                             <---------DAG2 ------>ANAC46                                            <----------DOF2 ------>ANAC58                                           <---------DAG2 ------>ANAC55(2)                                     <-----------GT1         --------->AHL20(2) ------>ANAC55(1)                                  --------->MYB52(2)    --------->AtLEC2 ------>ANAC58              <-----------GT1      <---------MYB52(1) <-----------GT1 ------LBD16              <-----------HVH21    <---------ANAC58<---------ANAC58            <--------- -------GT1     --------->At4g35610            <---------ANAC58<---------ANAC58<---------AHL20(2)   acgcatctcaattatagcagaagaacaatgtcactgtccaaaaacatttgcgttatttgccttttgcttttctccatgcattaaatctcatttctaccct  20286800                                                                                            ---------                                                                                           --------->AHL20(2)                                                                                        --------->WOX13(1)                                                                                   <---------AHL20(2)                                                                                   <---------ICU4                                                                                  <---------ATHB51                                                         --------->ATHB12         --------->ICU4               --------->YAB1                           <---------YAB1            <---------YAB1               <---------ICU4                    <---------ALFIN1              <---------AHL20(2)           <---------ALFIN1     <-----------GT1  --------->AtMYB61             --------->AHL20(2)  --------->DAG2           <-----------GT1    <------ZmHOX2a(1)            <---------YAB1 <---------ATHB12 ---------->DOF2       <----------DOF2   ------>ZmHOX2a(1) <---------WOX13(1) <---------WOX13(1) --GT1 <-----------HVH21  --------->AHL20(2)  <---------PCF5      --------->TOE2(3)-------->HAHB4   -   tgttaaagtggtcacactcattactctttttaatatactaatcctacaggaccacctcgtgattgttatctcaaattttgattaattattcaatcaatta  20286900         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       <---------AGP1       <---------ARR14(3)       --------->ARR14(3)              <---------ZAT6       <---------ARR11(3)          <---------YAB1       --------->ARR11(3)        --------->ATHB12            --------->LBD16       --------->AGP1           <---------YAB1              <---------ANAC46       --------->ARR14(2)       --------->ICU4             <---------------------WRI1       <---------ARR14(2)    <---------YAB1                --------->ZAT14       <-----------ARR10 <---------GLK1(2)                 <---------ZAT14      <---------CCA1(2)  --------->ARR11(3)            --------->ZAT6      <---------ARR14(1) <---------ARR11(3)   --------->At4g35610        --------->YAB1     ----------->ARR10 <---------TOE1(3)      <---------At4g35610 --------->GLK1(1) >WOX13(1)             <---------TOE2(3)   ---------->DOF2 <---------LBD16    <---------YAB1--------- --------->DOF2    --------->YAB1<---------ICU4       <---------YAB1  ---------->DOF2      ----------   gccaaagcagatcttcttcaattttaagattttgatgattactgttaaagctgactatcactgcggggaattcaaagatgatgctagtatacaaaaagag  20287000                                                                           ----------->RAV1(1)                                                                     --------->ALFIN1                                              <---------YAB1       --------->ALFIN1  --------->CCA1(2)                                         <---------ANAC58          <-----------RAV1(1)                                         <---------ANAC58  <---------HSFB2a(2)      --------->ARR11(3) >DAG2                                --------->ZAT18      --------->HSFB2a(2)      <---------ARR11(3) >DOF2             --------->GLK1(2)  <---------ZAT18   <----------DOF2 --------->PCF5     <---------At4g35610   aagcatggtttcaaattgcagaatcaggcccatatataagtgggcttgattatttgggcttttggaagagtgtggcccaacatagagatatagagctgtt  20287100                                                                            ------>NtERF2                                                                           --------->LBD16                                                                           <---------ATERF1(2)                                                                       ---------->CDC5                                                                     --------->AtMYB61                                                                    --------->MYB46(3)                   --------->At4g35610                             ------>MYB46(1)                   <---------At4g35610                             -------->P                   --------->ZAT2                                  ------>MYB83---------->DOF2                   <---------ZAT2                                 --------->MYB55(1)                 --------->ATERF1(1)                             <---------MYB59 --------->ICU4                 <------NtERF2                                   <---------MYB111(1)                --------->LBD16                                  --------->MYB46(3)               <---------ANAC58                            <--------HAHB4--------->At4g35610       <-               <---------ANAC46                            <---------ICU4<---------At4g35610      ---               <---------DEAR3(1)         <---------AHL20(2)     <---------MYB111(2)        ---------               <---------ANAC58          ------------>CBF  --------->YAB1<---------LBD16    <--------              <---------LBD16      <-----------GT1        <------ZmHOX2a(2)--------->ATERF1(2)    <--          <---------AtLEC2    ------>ZmHOX2a(2) <-----------GT1  <---------MYB46(2)         <--------       <----------DOF2    ----------->HVH21    *TSS       <---------ATHB12<---------ANAC46<----------   atcgtctgtctttcatggcggagcagaggtgatcgtttcactattcaatttcactcgtcgatcattaccaacctctgcgggcaaagatggaattcgagaa  20287200          --------->KAN4(2) -----ZmHOX2a(2)                                                   --------->YAB1 ------>ARR11(3)                                                   --------->ATHB12 >HSFB2a(2)                      <--------P                        <---------ICU4                 <-- -HSFB2a(2)       <---------MYB46(3)                        <---------CCA1(2)                   ----- -------ARR11(3) <---------MYB52(1)                    --------->At4g35610                     <----- -HSFC1(1)--------->WOX13(1)   <------MYB46(1)    --------->WOX13(1)    <---------YAB1   <---------MYB52(1) -----------WRI1<-------GAMYB  <------MYB83   ----------->GT1     <---------YAB1  <---------GLK1(1) -   gatcaaggtgatcaatcccgttgttgaaatggatggtaagtgttcgaacagtcaattagctcaaatctatgattacgattatgggtttctcgttactctg  20287300           <---------------AGL15           --------------->AGL15          <---------ANAC58                  --------->LBD16          <---------ANAC46                 <---------ANAC58    --------->ATHB12                       <---------ANAC58                                 <--------  <---------WOX13(1)            ------>ZmHOX2a(2)    <----------DOF2                --------->AHL20(2) -------WOX13(1)       <---------ARR14(2)  <---------ANAC46                         <---------AHL20(2) ---->ATHB12           --------->ARR14(2)  <---------ANAC55(1)                      <---------AHL20(1) ----YAB1 <---------ANAC58  ----------->HVH21     <-----------GT1                   --------->AHL20(1) -------->ATHB12    <---------ANAC46      <---------LBD16                          --------->AHL20(2)   attgattgatttgcttatattggagtatatgtgatcggctctgttccgggtttttcttttcttctatatgttatagttttatgaaataaattcagaaact  20287400                                                                                              <------                                 --------->ANAC58                                             -------                                 --------->ANAC58                                      <----------DOF2                             <------ZmHOX2a(1)                                      <-----------GT1                          <-----------RAV1(2)                                    --------->TOE2(3)                        --------->ANAC58                                         --------->TOE1(3)                        --------->ANAC46                                         --------->YAB1                        --------->ANAC58                                       --------->ARR11(3)   <                   <---------ZAT14                              ---------->DOF2<-----------ARR10    -                   <---------ZAT18                         <-------TEIL        <---------ARR11(3)----                   --------->ZAT14                  --------->HSFB2a(2)        --------->GLK1(2) <---   <----------DOF2 --------->ZAT18                  <---------HSFB2a(2)       --------->RVE1(1) <---- -GLK1(2)<---------AHL20(2) --------->At4g35610    <---------LBD16      ----------->GT1<---------DAG2   tgactctttatttattctctgtgcacaagcaggagacgaaatgactcgagttatctggaaattcatcaaagacaaggtaaaaatcttaacttttttttaa  20287500                                                                        <---------At4g35610                                                                        --------->ZAT2                                                                    ------>ZmHOX2a(1)                                                                    --------->LBD16                                                                    --------->HSFB2a(2)   --------->YAB1                                                   =================================HOX2a_HOX2a ---AHL20(2)                                                       <---------LBD16 -->AHL20(2)                      <---------ARR11(3)              ----------->RAV1(2) ----------DOF2                   --------->ARR11(3)       <-----------GT1                    ------>ZmHOX2a(2) -------->TOE2(3)              <---------AHL20(2)         <-----------GT1     <---------GLK1(1) ----->ARR11(3)                --------->AHL20(2)  <---------At4g35610  <---------ZAT2      --------- ------ARR11(3)           <---------YAB1           --------->At4g35610  --------->At4g35610 <-------- -----CCA1(2)       <----------DOF2        --------->GLK1(2)   <----------DOF2--------->GLK1(1)   atctttaatcacagattgaattctttttgtgattaaaatcttgagaattttgcagcttattttccctttcctggagctggatatcaaatactttgatctt  20287600  Previous    Next  AGI:  At1g54340.1    Description:  ICDH; isocitrate dehydrogenase (NADP+). similar to isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G14590.1); similar to isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G65930.1); similar to NADP-isocitrate dehydrogenase [Citrus limon] (GB:AAD51361.1); similar to NADP specific isocitrate dehydrogenase [Daucus carota] (GB:BAA34112.1); similar to isocitrate dehydrogenase (NADP+) [Apium graveolens] (GB:CAA73139.1); contains InterPro domain Isocitrate dehydrogenase NADP-dependent, eukaryotic; (InterPro:IPR004790); contains I Range:  from: 20287147    to: 20290453    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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