Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ANAC58                       --------->REM1(1)                     <---------------AGL15               <------------ATHB5       --------->MYB46(3)               -------->ATHB1      --------->CCA1(2)               <--------ATHB1      <------ZmHOX2a(2)               --------->YAB1     <---------ARR11(3)               --------->ATHB12   --------->AGP1               --------->ATHB51   --------->ARR14(2)               <-------TEIL ---->MYB83   <---------ATHB12    --------->ARR11(3)            <---------At4g35610  <------ZmHOX2a(2) ---->MYB46(1)<---------ATHB51    <---------ARR14(2)   --------->AHL20(2)<---------TOE2(3)  --------- ------MYB46(2)<---------ICU4 ---------->DOF2      <---------TOE2(3)     <---------YAB1    <--------- ------MYB59  --------->ICU4--------->ANAC58----------->RAV1(1) --------->At4g35610 --------->ARR11(3)   ctaacttgcaatttcaataattgctgcatcaagaaagatccaacaacaacatttagattatatatcagatgcattaacattggatagatcaagacaacaa  20244500                            --------->ATHB12                      <--------P                      <---------WOX13(1)                     <---------ANAC58                     <---------ANAC58                     <-------GAMYB                    --------->MYB52(2)                    --------->MYB55(2)                    <---------MYB46(3)                    <------MYB83                    <------MYB46(1)                                    ---------->ID1                   <---------AtMYB61                        <--------ATHB1                 <-------GAMYB                              <---------ICU4                --------->MYB55(2)                          -------->ATHB1                --------->MYB52(2)                          --------->ATHB51                <---------MYB46(3)                          --------->ATHB12                <-----------RAV1(1)                        <---------YAB1                --------->MYB111(2)                        <---------ATHB51                <---------At4g35610      <-----------RAV1(1) <---------WOX13(1)               --------->ICU4             <----------DOF2 -->RAV1(1)   <---------MYB52(1)                   --------------->AtSPL8<----------DOF2 --------->YAB1 -ID1 <---------MYB46(3)--------->ATHB12 <-------TEIL   ------------>ATHB5    <----------DOF2--------   aatagtagttgttgctgtttgttggttgattgattagtccaaattcatctctatctgtacaattattgattttgtcttttctttccttctttcatatgcc  20244600                                                                  <---------ANAC58                                                                  <---------ANAC46                                                            <---------YAB1                                                           --------->AHL20(2)             <---------At4g35610                                                          <--------HAHB4                  --------->At4g35610                                                          <---------ICU4               <-------TEIL -                                                      <---------YAB1                 --------->ARR14(2)                                  <---------------AtSPL8 --------->ICU4              <---------ARR14(2)                          --------->YAB1        <---------YAB1    <---------ANAC58   <---------GLK1(2)     <---------ZAT6      <---------YAB1       ----------->GT1--------->YAB1         --------->At4g35610 ->ANAC46        ---------->DOF2  <---------------AtSPL3 <---------YAB1         <-----------HVH21  --   acaagttgtgttacagacacaaaggctatgatagttcaagtacttaaattgttattctcattattatagcgtctaaattttgtgtcagattcagctaata  20244700                                       --------->ARR14(2)                                       --------->ARR11(3)                         ------>ZmHOX2a(1)                                       <---------ARR14(2)                        --------->TOE2(3)         <---------YAB1                <---------ARR11(3)                        --------->TOE1(3) -------->DAG2        <---------YAB1 <---------MYB46(3)                        <---------YAB1 -------->DOF2 --------->YAB1    <---------AtMYB61   ---------->DOF2        <---------YAB1        ---   gaaaagttgttatgaaattagaatttgatagagaattggtggatattcagatagagaaagttgatatgaaatttgtttattatccttaacaaaattgttt  20244800                          ------------>CBF         --------->YAB1  --------->ANAC58     ---------->DOF2        <---------YAB1   --------->ANAC58   ----------->TBP                                    <----- ------->DOF2  <---------AHL20(2)         <----------DOF2<---------REM1(1)                    -------   caaaggcctgataatagtttatttcaaacccaatctaacatgggctttaaaagcccaaaatgtagcctcatttgttttcccaagtacaagtaggcgagga  20244900                                                          <-----------HVH21                                                          <---------ATERF1(1)                                                          <---------SPL7                                                        --------->ATERF1(1)                                               --------->ATERF1(1)--------->ZAT2                                               <------NtERF2      <---------ZAT2                                      <---------YAB1    <------NtERF2        --------->MYB52(1)   <---------ANAC55(2)     --------->ATERF1(1)     ---------->DOF2  --------->YAB1             --------->ANAC58 ------>NtERF2--------->ATERF1(1)             --------->At4g35610 -ZmHOX2a(1)                 --------->ANAC58--------->ETT(2) <------NtERF2<---------HSFB2a(2) ---->GT1   *TSS          <---------MYB52(1) <---------DEAR3(1)--------->LBD16 --------->DAG2   aaaatcagagtaacgtcttcttcattcagttacgaaaaccatcaatggcgacggagtcgtcgtccccgagctctgttcggaaaggtgagtctccgatgaa  20245000                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                --------->GLK1(1)                                                <---------CCA1(2)                   --------->GLK1(2)            <---------GLK1(1)                  <---------GLK1(2)            ------->TEIL  --------->GLK1(1)               --------->ANAC46             <---------ANAC55(2) <---------ANAC58              <---------LBD16               <---------ANAC55(1) <---------ANAC46            --------->ETT(2)                <---------ANAC46 <---------GLK1(1)            <---------ETT(2)                --------->ANAC55(2) <---------ANAC58          --------->REM1(2)                 <---------ANAC58<---------ARR11(3)          <-----------HVH21                 <---------ANAC58--------->ARR11(3)       <---------ANAC58                    <-----------------------TaNAC69(2)       <---------ANAC58          ------>ZmHOX2a(2)  <-----------RAV1(1)<------ZmHOX2a(1)        <----   attcggcagtcgtgtcgacggaatctatgaattgatcgattcaattacgtatatctgttgaagatttcttgtaggacttcgttttgatattttctagggt  20245100                                                                                     --------->TOE2(3)                                                                                     --------->HSFB2a(2)                        <---------At4g35610                                          --------->YAB1               <---------MYB46(3)               ------>ZmHOX2a(1)             <-----------GT1  ------        ----------->HVH21                 --------->ALFIN1               <---------ARR11(3)  -------- -----GLK1(1)<-------GAMYB        --------->MYB52(1)--------->ANAC46   <---------TOE2(3)     <-------   ttctgtttctctgacagttgttgttcatctaagagctactggaggtgctcctatactcaaacaatctaagttcaaggtattaatcttccataatcgatct  20245200                                                                                              <------                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(1)                  <----------DOF2                                                      <---------ANAC46                 <---------ANAC58                                                      <---------ANAC55(2)                 <---------ANAC58               <---------ARR11(3)                  --------->ICU4                 <---------ANAC46           <---------ZAT14                       --------->YAB1                <------NtERF2            <---------ANAC46               <---------TOE2(3)   <-------- >ZmHOX2a(2)  <---------RAP2.6(2)        <---------ANAC58        <---------ANAC46 <--------HAHB4 ->ARR11(3) <------MYB46(1)              <---------ANAC58        <---------ANAC58 <---------ICU4 --ARR11(3) <------MYB83            --------->GLK1(2)            <---------ANAC58<---------YAB1   <--   tctcatgttgaatttggtggcttttagttttgatgaagaatttgagtgtagatgtttgctaaacgttgcttgttaagtttttgatcattatgtgttgtga  20245300                                                                                 <---------MYB46(3)                                                                                 <------MYB83                                                                                 ----------->GT1                                                                                 <------MYB46(1)    ----------->GT1                                                             <---------TOE2(2)    <---------ANAC46                                                            <---------TOE1(2)  <------MYB46(1)                                                            <---------MYB46(3)  <------MYB83              <---------AHL20(2)                               --------->ATHB12 <---------AtMYB61          --------->AHL20(2)   <----------DOF2        <---------YAB1 ---YAB1                ----------->GT1     <---------WOX13(1)    <-------TEIL <---------MYB52(1) <-- -ANAC46          --------->LBD16         --------->ATHB12     --------->At4g35610               <--- ---------RAV1(1)<---------LBD16     ---------->DOF2           <---------At4g35610               <---   atgttggtgtaaatagattccagggactgataaatttgccaaagtgattgactttcttagaagacagcttcattctgattcgttggtaacaaaaaacaca  20245400  Previous    Next  AGI:  At1g54210.1    Description:  ATG12a (AUTOPHAGY 12); protein binding. Identical to Autophagy-related protein 12a (ATG12A) [Arabidopsis Thaliana] (GB:Q8S924); similar to APG12/APG12B (AUTOPHAGY 12) [Arabidopsis thaliana] (TAIR:AT3G13970.1); similar to Putative autophagy-related protein 12 (GB:Q1SF86); contains InterPro domain Autophagy protein 12; (InterPro:IPR007242) Range:  from: 20244912    to: 20246230    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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