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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                             --------------->AGL15
                                                                             <---------------AGL15
                   --------->GLK1(2)                                        ========================
                   <---------ARR11(3)                                       <-----------------AGL3
                   --------->ARR11(3)              <----------DOF2          ----------------->AGL3
       <---------ANAC58                      <---------YAB1          --------->YAB1
       <---------ANAC46                   --------->GLK1(2)         <---------YAB1           <------ZmHOX2a(1)
       <---------ANAC58           --------->AHL20(2)    <----------DOF2     ----------------->AGL2
 
ctacaaaattgcttgtatgaaaaatcttggtccgaaatttaagagattatgtttcttttctttggaagtgtatcatagaactataaatagaagggaggaa  20152900
                                                                    <---------ARR11(3)
                                                                    --------->ARR11(3)
                                 <---------At4g35610                <---------ARR14(3)
                              <---------ZAT18                       --------->ARR14(3)
                              --------->ZAT18                       <---------ARR14(2)
                              <---------ZAT14              ---------->DOF2
                      --------->SPL7------>MYB83        ------>MYB46(1)
                     ------>NtERF2<---------ALFIN1    <---------MYB46(2)                    <-------
                    <---------SPL7--------->MYB46(3)  <---------MYB59 ------>ZmHOX2a(2)     --------
                    --------->ZAT18 ------>MYB46(1)   <---------------AGL15                 <-------
                  <---------At4g35610       --------->ATHB12       <------ZmHOX2a(1)        --------
                  --------->At4g35610     <---------WOX13(1)    --------->CCA1(2)    ----------->HVH21
            --------->TOE1(2) --------->ZAT14        --------->ANAC46<------ZmHOX2a(2)   --------->DEAR3(1)
  <---------GLK1(2)--------->ATERF1(1)  --------->ATHB12------>MYB83--------->ARR14(2) <---------At5g28300
======================================================================MADS_MADS     <-----------HVH21
 
gtttggattcttgaacatgggagcggacgattgtgcaccagcctcattgattgtataccaaacaaagataggatcttgttttaagcgagtcaccgagctg  20153000
                                                                              <---------ALFIN1
                                                                              --------->REM1(1)
                                                                            <-----------HVH21
                                                                         ------>ZmHOX2a(2)
                                                                        <------ZmHOX2a(2)
                                                                       --------->ARR11(3)
                           <---------PCF2                              <---------ARR11(3)
                           --------->TCP15(1)                          <---------ARR14(2)
                           --------->TCP20                             --------->ARR14(2)
                          ----------->HVH21                       ------>ZmHOX2a(2)
   <-----------GT1      --------->ALFIN1                        <---------ARR11(3)
--ZAT2           <---------ZAT14         <------ZmHOX2a(2)      --------->ARR11(3)
->At4g35610      --------->ZAT14        --------->ARR11(3)   <---------WOX13(1)
--At4g35610 <---------ANAC58      --------->WRKY18(1)<---------ANAC58 --------->At4g35610
->ZAT2      <---------ANAC58     <-----------HVH21   <---------ANAC58 <---------At4g35610
 
atcaatttgcctcttgcttcttcactggtgggacctggtcatggatcatgttcttgacttgttgaatgatctcagatcccttcacctctaggttgaatgt  20153100
                                                                                --------->ARR14(2)
                                                                                <---------ARR14(2)
                                                                               <------NtERF2========
                                                                              <---------DEAR3(2)
                                                                             <---------DEAR3(1)
                                                                            --------->RAP2.6(3)
                                                                           <-----------HVH21------>ZmHOX2a(2)
                                                                           <---------ARR14(2)
                                                                           --------->ARR14(2)
                                                                        <---------ANAC58  --------->ARR11(3)
                                                                        <---------ANAC46  <---------ARR14(2)
                                      <----------CDC5                   <---------ANAC58  <---------ARR11(3)
                                     ----------->RAV1(2)              --------->MYB52(1)  --------->ARR14(2)
                             <---------ICU4     ----------->HVH21    ----------->HVH21    <---------AGP1
                            <---------YAB1    ----------->RAV1(2)    --------->WRKY38(1)  ------->TEIL
                          --------->YAB1    --------->PCF5           --------->WRKY12<---------AtLEC2
    ---------->DOF2 --------->YAB1<-----------GT1                  --------->At4g35610   <---------CCA1(2)
 
tttccccttaagcgttgatacaaaaatactcatcatttcaccctgaggtccctgacccagacccaaaaccagttgacgggtcggctctgcatggatcttg  20153200
                                                                                  --------->MYB55(1)
                                                                                 <---------MYB46(2)
                                                                                 >>>>>>>>>>MYB61
                                                                                 <---------MYB55(2)
                                                                                 --------->AtMYB61
                                                                                 <---------MYB111(2)
                                                                                 <---------MYB52(2)
                                                                                 <---------MYB111(1)
                                                                                --------->ANAC46
                                                                              --------->DEAR3(1)
                                                                              <---------ALFIN1
                                                                      <---------ICU4
                                                                      --------->ATHB12
                                                                     <---------YAB1         --------
                                                                   --------->YAB1--------->MYB46(3)
                                                                 <---------ARR11(3)        ---------
                       --------->ANAC58                          --------->ARR14(2)------>MYB46(1)
                    ------>ZmHOX2a(1)                            --------->GLK1(2)----------->HVH21
                   --------->TOE2(3)                             --------->ARR11(3)--------->MYB52(1)
             <---------At4g35610                                 <---------ARR14(2)------>MYB83
             --------->At4g35610                       <---------ANAC58      --------->MYB46(3)
        <---------LBD16--------->ANAC58                <---------ANAC58   <---------ZAT18<------ZmHOX2a(1)
===========================HOX2a_HOX2a   <----------DOF2        <---------GLK1(2)<---------MYB59
 
atgtcgattgtctcggagctatcctcaagctctaggtttatggtctttcccttctctgtcttgataagaatcttcattgcaccacctaacgaggaatctg  20153300
                                                                                          <---------ZAT2
                                                                                          --------->At4g35610
                                                                              <---------AHL20(2)
                                                                             --------->ARR11(3)
                                                                             <---------AHL20(1)
              ----------->GT1                                                <---------AHL20(2)
              --------->ANAC58                                               <---------ARR11(3)
              --------->ANAC58                                               --------->AHL20(1)
  <----------ID1       ---------->DOF2                       ---------->DOF2 --------->AHL20(2)
------------------------>ANAC81                           <-----------TBP   --------->AHL20(2)   <<<
->At4g35610  --------->DAG2                     >>>>>>>>>CBP60g           --------->AHL20(2)    ----
>GLK1(2)    ---------->DOF2                     >>>>>>>>>SARD1        --------->AHL20(2)  <---------At4g35610
 
aaaaaaaaacaaaaaaaaagcaaaatcaaagtctgagaacaaatatttgaaatttggaggtttttaaagagaataaaaaatatatttggagacagctaag  20153400
           <---------YAB1
      <----------DOF2    <-----------GT1                                     --------->MYB52(1)
 <---------ARR11(3)     <-----------GT1                                     --------->ARR11(1)
 --------->ARR11(3) --------->AHL20(2)                                  ---------->DOF2
<<<<<<WRKY18  <-----------GT1                                   <---------At5g28300
----->WRKY18(1)   <----------DOF2       <-----------GT1        <-----------GT1        <---------ZAT6
 
tcaaggtctcttttatgtttccttttattacccctccatggtttaacattctactaatatttgtttttaccgttctaaagaaacggctagtcttatttga  20153500
                                                                                                 <--
                                                                                                 <--
                                                                                                 ---
                                                                                <---------ZAT14 ----
                                         <---------ANAC55(2)                <-----------GT1    <----
                                         --------->ANAC55(2)            <---------DAG2         <----
                                       <-----------GT1                  <----------DOF2        <----
             --------->ANAC55(2)   <---------WOX13(1)          --------->MYB111(1)             <----
             <---------ANAC55(2)  <------------CBF             --------->MYB46(2)  --------->ANAC58
           <-----------GT1       --------->ATHB12 ---------->DOF2 <-----------GT1  --------->ANAC46
      --------->YAB1            <---------YAB1  <---------HSFB2a(2)<---------At5g28300         <----
     <---------YAB1        ---------->DOF2 <---------ICU4      --------->MYB52(2)  --------->ANAC58
   --------->YAB1  ----------->HVH21<---------MYB46(3)       <---------MYB52(1) --------->ZAT14-----
 
aatagatgataatattacttatttgacccaaaaagatgattgttacttattccaaaagaaacttgttagttactgctttttactacacacaaaaaacaac  20153600
           --------->YAB1                                                                         --
           --------->AHL20(2)                                                                     --
          <---------ATHB51                                                                      ----
---------------AG                                                                               ----
---------------AGL1                                                                            -----
----->P --------->WOX13(1)                                                                    <-----
--->GAMYB --------->ICU4                                                                      ------
-----MYB46(2)                           ------>MYB83                   ----------->GT1        <-----
-----MYB55(2)                           ------>MYB46(1)              --------->GLK1(2)    ----------
-----MYB111(2)                        <---------MYB59            >>>>>>>>>TBF1           ------>NtERF2
-----MYB52(2)                      <-----------GT1          <---------ANAC46          --------->At4g35610
-----MYB111(1)                --------->YAB1             ----------->HVH21        --------->ANAC46--
---->MYB46(3)<---------YAB1  <---------YAB1              ----------->TGA1     <-----------GT1 ------
 
tacccatttggcaattataaaacttacaagttatcatataaccaaattttctattaatcggtgacgaagaagaatcgaaattttcaagtcgctgcgacca  20153700
                             <-----------HVH21
                            ================================bZIP_DOF
     <---------ALFIN1       <---------O2
   <------ZmHOX2a(2)        --------->TGA1a
  <---------ARR14(2)        --------->ANAC46
  --------->ARR14(2)        --------->O2
------->ANAC46              <---------bZIP60(2)                                          <----------DOF2
------->ANAC58        <------NtERF2                                                  ------->MYC2
-->MYB83             ------>NtERF2                                                   <-------MYC2
-->MYB46(1)         <---------DEAR3(1)                                               ------->MYC3
---->MYB55(1)       <---------ATERF1(2)                                          <-------TEIL
----MYB55(2)        <---------ANAC46                                           <-------MYC2
--->MYB46(3)        <---------RAP2.6(2)                       --------->YAB1   ------->MYC2       --
----MYB59           --------->ATERF1(2)                     <-----------GT1    ------->MYC3       --
->HVH21--------->ANAC46     <---------TGA1a      <----------DOF2         ----------->HVH21        <-
------->ANAC58     --------->RAP2.6(3)--------->SPL7      <---------AHL20(2)   <-------MYC3 <-------
--->AtMYB61        <---------LBD16<---------TOE1(2)<-----------GT1   ---------->DOF2 <-------MYC3 <-
 
aacgcgatccacggtccagtttggcggcaagacgtcgctcgttcgctctattctttactattttatcatgtcaaaagtgacacatgcatatgcttttgat  20153800
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AGI:  At1g53980.1   
Description:  polyubiquitin-related. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT1G53950.1); contains domain PTHR10666 (PTHR10666); contains domain PTHR10666:SF6 (PTHR10666:SF6); contains domain SSF54236 (SSF54236)
Range:  from: 20153002    to: 20153277    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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