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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------------->
AGL15
<---------------
AGL15
--------->
GLK1(2)
========================
<---------
ARR11(3)
<-----------------
AGL3
--------->
ARR11(3)
<----------
DOF2
----------------->
AGL3
<---------
ANAC58
<---------
YAB1
--------->
YAB1
<---------
ANAC46
--------->
GLK1(2)
<---------
YAB1
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
AHL20(2)
<----------
DOF2
----------------->
AGL2
ctacaaaattgcttgtatgaaaaatcttggtccgaaatttaagagattatgtttcttttctttggaagtgtatcatagaactataaatagaagggaggaa
20152900
<---------
ARR11(3)
--------->
ARR11(3)
<---------
At4g35610
<---------
ARR14(3)
<---------
ZAT18
--------->
ARR14(3)
--------->
ZAT18
<---------
ARR14(2)
<---------
ZAT14
---------->
DOF2
--------->
SPL7
------>
MYB83
------>
MYB46(1)
------>
NtERF2
<---------
ALFIN1
<---------
MYB46(2)
<-------
<---------
SPL7
--------->
MYB46(3)
<---------
MYB59
------>
ZmHOX2a(2)
--------
--------->
ZAT18
------>
MYB46(1)
<---------------
AGL15
<-------
<---------
At4g35610
--------->
ATHB12
<------
ZmHOX2a(1)
--------
--------->
At4g35610
<---------
WOX13(1)
--------->
CCA1(2)
----------->
HVH21
--------->
TOE1(2)
--------->
ZAT14
--------->
ANAC46
<------
ZmHOX2a(2)
--------->
DEAR3(1)
<---------
GLK1(2)
--------->
ATERF1(1)
--------->
ATHB12
------>
MYB83
--------->
ARR14(2)
<---------
At5g28300
======================================================================
MADS_MADS
<-----------
HVH21
gtttggattcttgaacatgggagcggacgattgtgcaccagcctcattgattgtataccaaacaaagataggatcttgttttaagcgagtcaccgagctg
20153000
<---------
ALFIN1
--------->
REM1(1)
<-----------
HVH21
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
PCF2
<---------
ARR11(3)
--------->
TCP15(1)
<---------
ARR14(2)
--------->
TCP20
--------->
ARR14(2)
----------->
HVH21
------>
ZmHOX2a(2)
<-----------
GT1
--------->
ALFIN1
<---------
ARR11(3)
--
ZAT2
<---------
ZAT14
<------
ZmHOX2a(2)
--------->
ARR11(3)
->
At4g35610
--------->
ZAT14
--------->
ARR11(3)
<---------
WOX13(1)
--
At4g35610
<---------
ANAC58
--------->
WRKY18(1)
<---------
ANAC58
--------->
At4g35610
->
ZAT2
<---------
ANAC58
<-----------
HVH21
<---------
ANAC58
<---------
At4g35610
a
tcaatttgcctcttgcttcttcactggtgggacctggtcatggatcatgttcttgacttgttgaatgatctcagatcccttcacctctaggttgaatgt
20153100
--------->
ARR14(2)
<---------
ARR14(2)
<------
NtERF2
========
<---------
DEAR3(2)
<---------
DEAR3(1)
--------->
RAP2.6(3)
<-----------
HVH21
------>
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
ARR11(3)
<---------
ANAC46
<---------
ARR14(2)
<----------
CDC5
<---------
ANAC58
<---------
ARR11(3)
----------->
RAV1(2)
--------->
MYB52(1)
--------->
ARR14(2)
<---------
ICU4
----------->
HVH21
----------->
HVH21
<---------
AGP1
<---------
YAB1
----------->
RAV1(2)
--------->
WRKY38(1)
------->
TEIL
--------->
YAB1
--------->
PCF5
--------->
WRKY12
<---------
AtLEC2
---------->
DOF2
--------->
YAB1
<-----------
GT1
--------->
At4g35610
<---------
CCA1(2)
tttccccttaagcgttgatacaaaaatactcatcatttcaccctgaggtccctgacccagacccaaaaccagttgacgggtcggctctgcatggatcttg
20153200
--------->
MYB55(1)
<---------
MYB46(2)
>>>>>>>>>>
MYB61
<---------
MYB55(2)
--------->
AtMYB61
<---------
MYB111(2)
<---------
MYB52(2)
<---------
MYB111(1)
--------->
ANAC46
--------->
DEAR3(1)
<---------
ALFIN1
<---------
ICU4
--------->
ATHB12
<---------
YAB1
--------
--------->
YAB1
--------->
MYB46(3)
<---------
ARR11(3)
---------
--------->
ANAC58
--------->
ARR14(2)
------>
MYB46(1)
------>
ZmHOX2a(1)
--------->
GLK1(2)
----------->
HVH21
--------->
TOE2(3)
--------->
ARR11(3)
--------->
MYB52(1)
<---------
At4g35610
<---------
ARR14(2)
------>
MYB83
--------->
At4g35610
<---------
ANAC58
--------->
MYB46(3)
<---------
LBD16
--------->
ANAC58
<---------
ANAC58
<---------
ZAT18
<------
ZmHOX2a(1)
===========================
HOX2a_HOX2a
<----------
DOF2
<---------
GLK1(2)
<---------
MYB59
atgtcgattgtctcggagctatcctcaagctctaggtttatggtctttcccttctctgtcttgataagaatcttcat
tgcaccacctaacgaggaatctg
20153300
<---------
ZAT2
--------->
At4g35610
<---------
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(1)
----------->
GT1
<---------
AHL20(2)
--------->
ANAC58
<---------
ARR11(3)
--------->
ANAC58
--------->
AHL20(1)
<----------
ID1
---------->
DOF2
---------->
DOF2
--------->
AHL20(2)
------------------------>
ANAC81
<-----------
TBP
--------->
AHL20(2)
<<<
->
At4g35610
--------->
DAG2
>>>>>>>>>
CBP60g
--------->
AHL20(2)
----
>
GLK1(2)
---------->
DOF2
>>>>>>>>>
SARD1
--------->
AHL20(2)
<---------
At4g35610
aaaaaaaaacaaaaaaaaagcaaaatcaaagtctgagaacaaatatttgaaatttggaggtttttaaagagaataaaaaatatatttggagacagctaag
20153400
<---------
YAB1
<----------
DOF2
<-----------
GT1
--------->
MYB52(1)
<---------
ARR11(3)
<-----------
GT1
--------->
ARR11(1)
--------->
ARR11(3)
--------->
AHL20(2)
---------->
DOF2
<<<<<<
WRKY18
<-----------
GT1
<---------
At5g28300
----->
WRKY18(1)
<----------
DOF2
<-----------
GT1
<-----------
GT1
<---------
ZAT6
tcaaggtctcttttatgtttccttttattacccctccatggtttaacattctactaatatttgtttttaccgttctaaagaaacggctagtcttatttga
20153500
<--
<--
---
<---------
ZAT14
----
<---------
ANAC55(2)
<-----------
GT1
<----
--------->
ANAC55(2)
<---------
DAG2
<----
<-----------
GT1
<----------
DOF2
<----
--------->
ANAC55(2)
<---------
WOX13(1)
--------->
MYB111(1)
<----
<---------
ANAC55(2)
<------------
CBF
--------->
MYB46(2)
--------->
ANAC58
<-----------
GT1
--------->
ATHB12
---------->
DOF2
<-----------
GT1
--------->
ANAC46
--------->
YAB1
<---------
YAB1
<---------
HSFB2a(2)
<---------
At5g28300
<----
<---------
YAB1
---------->
DOF2
<---------
ICU4
--------->
MYB52(2)
--------->
ANAC58
--------->
YAB1
----------->
HVH21
<---------
MYB46(3)
<---------
MYB52(1)
--------->
ZAT14
-----
aatagatgataatattacttatttgacccaaaaagatgattgttacttattccaaaagaaacttgttagttactgctttttactacacacaaaaaacaac
20153600
--------->
YAB1
--
--------->
AHL20(2)
--
<---------
ATHB51
----
---------------
AG
----
---------------
AGL1
-----
----->
P
--------->
WOX13(1)
<-----
--->
GAMYB
--------->
ICU4
------
-----
MYB46(2)
------>
MYB83
----------->
GT1
<-----
-----
MYB55(2)
------>
MYB46(1)
--------->
GLK1(2)
----------
-----
MYB111(2)
<---------
MYB59
>>>>>>>>>
TBF1
------>
NtERF2
-----
MYB52(2)
<-----------
GT1
<---------
ANAC46
--------->
At4g35610
-----
MYB111(1)
--------->
YAB1
----------->
HVH21
--------->
ANAC46
--
---->
MYB46(3)
<---------
YAB1
<---------
YAB1
----------->
TGA1
<-----------
GT1
------
tacccatttggcaattataaaacttacaagttatcatataaccaaattttctattaatcggtgacgaagaagaatcgaaattttcaagtcgctgcgacca
20153700
<-----------
HVH21
================================
bZIP_DOF
<---------
ALFIN1
<---------
O2
<------
ZmHOX2a(2)
--------->
TGA1a
<---------
ARR14(2)
--------->
ANAC46
--------->
ARR14(2)
--------->
O2
------->
ANAC46
<---------
bZIP60(2)
<----------
DOF2
------->
ANAC58
<------
NtERF2
------->
MYC2
-->
MYB83
------>
NtERF2
<-------
MYC2
-->
MYB46(1)
<---------
DEAR3(1)
------->
MYC3
---->
MYB55(1)
<---------
ATERF1(2)
<-------
TEIL
----
MYB55(2)
<---------
ANAC46
<-------
MYC2
--->
MYB46(3)
<---------
RAP2.6(2)
--------->
YAB1
------->
MYC2
--
----
MYB59
--------->
ATERF1(2)
<-----------
GT1
------->
MYC3
--
->
HVH21
--------->
ANAC46
<---------
TGA1a
<----------
DOF2
----------->
HVH21
<-
------->
ANAC58
--------->
RAP2.6(3)
--------->
SPL7
<---------
AHL20(2)
<-------
MYC3
<-------
--->
AtMYB61
<---------
LBD16
<---------
TOE1(2)
<-----------
GT1
---------->
DOF2
<-------
MYC3
<-
aacgcgatccacggtccagtttggcggcaagacgtcgctcgttcgctctattctttactattttatcatgtcaaaagtgacacatgcatatgcttttgat
20153800
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AGI:
At1g53980.1
Description:
polyubiquitin-related. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT1G53950.1); contains domain PTHR10666 (PTHR10666); contains domain PTHR10666:SF6 (PTHR10666:SF6); contains domain SSF54236 (SSF54236)
Range:
from: 20153002
to: 20153277
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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