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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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     <----------ID1
     --------->ANAC58
     --------->ANAC46
     --------->ANAC58
-----ANAC55(2)                                    --------->DAG2
-----ANAC46                              <---------YAB1   ---------->DOF2
------>GT1       <----------DOF2  <-----------GT1---------->DOF2
 
gtataaacacgacaaaaattctttaagaagagttttatttcgatatgattcaaaaagtttcaaaagctgttatagttcgatttcggtgtgttatccatat  20101800
                            <-----------GT1
                           --------->AHL20(1)
                      --------->AHL20(2)                                               -------------
               <----------DOF2                                  <-----------RAV1(1)   <---------ANAC46
             <---------At4g35610                     --------------->AGL15   <---------YAB1
             --------->At4g35610                  <-----------GT1          <---------ICU4
   --------->DAG2 --------->ATHB12         --------->YAB1 --------->AHL20(2) --------->ICU4
  ---------->DOF2<---------YAB1     ---------->DOF2  ===============================================
 
aactaaaaagttggacagctttcattgaaatatactactcaaagaataagaaattactagatttattatgttgtctcatcatgtttatgacttatatgag  20101900
                                                                           <---------YAB1
                                                                          --------->AHL20(2)
                                                                          <---------AHL20(1)
                                            <-----------GT1               --------->AHL20(1)
    --------->ALFIN1                   --------->YAB1                     <---------AHL20(2)
   <-------MYC3                     <---------GLK1(1)             --------->ANAC58
   ------->MYC3                     --------->GLK1(1)          <---------ATHB12 <-----------GT1
-->AGL15  ---------->DOF2   ------>ZmHOX2a(1)            --------->AtLEC2--------->YAB1     --------
===MADS_MADS  --------->ALFIN1 --------->At4g35610    <-------TEIL--------->ANAC58       -----------
 
tatcaacgtggatgaaagtggtcgcttcttcctcatcggaaatcaaaataccgcatgttcatacaaatcaagaaaattataatttacaaatattgtaaag  20102000
                                                                     <---------ICU4
                                                                  <---------ICU4
                                                                 --------->ICU4
               --------->TOE2(2)                                 --------->AHL20(2)
               --------->TOE1(2)                                 <---------ATHB51               ----
   <---------AHL20(2)              <---------MYB59               <---------ATHB12       --------->ANAC58
   --------->ATHB51              ------->TEIL                    <---------AHL20(2)     --------->ANAC58
   <---------ICU4    --------->GLK1(1)                     --------->ANAC58         --------->ANAC58
   --------->AHL20(2)<---------GLK1(1)   --------->DAG2    --------->ANAC58         --------->AtLEC2
  --------->ICU4   <------ZmHOX2a(1)    ---------->DOF2  <---------ALFIN1           --------->ANAC46
-->DOF2<---------AHL20(2)       <---------TCP16(2)     ------->TEIL  <---------AHL20(2) ----------->GT1
>GT1--------->AHL20(1)        --------->ALFIN1       --------->ZAT18<---------YAB1  --------->ANAC58
 
agctaattattttataaacataggatatcaaatgtggacctaaaaaagtttgaaaatgcaccactcaaataattaatgcatacagccaagcaagtaaaac  20102100
                                      <---------AHL20(2)
                          ------------>CBF
             --------->AHL20(2) --------->AHL20(2) <---------At4g35610
   <----------ID1        <-----------GT1       <-----------GT1     ----------->TBP
 ---------->DOF2    <----------DOF2  --------->AHL20(2)        ------------>CBF     <---------ALFIN1
----->TOE2(3)<---------AHL20(2) <---------AHL20(2) --------->At4g35610 <-----------GT1   *TSS
 
attagaaagacaaaaaataaatacttttaaacaatttatattatatagtttttcatctcaaaactcaacaatataaaccctattccaccatcttctattc  20102200
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                   <XXXXXXXXXXXXXXXXXXXXMIR1886.2                                  -
                                  ------>MYB83                                                    --
                                  ------>MYB46(1)                                                 --
                                 --------->WOX13(1)                                              ---
                                --------->MYB46(3)                                               ---
                               <------NtERF2                   --------->GLK1(1)                 <--
                        --------->YAB1          <---------ARR14(2)                               ---
                        <---------ICU4          --------->ARR14(2)             <---------GLK1(2)----
         ----------->RAV1(1)  ------>NtERF2    <---------CCA1(2)             --------->ANAC58   ----
   --------->ANAC46    --------->ICU4---------->DOF2  <---------GLK1(2)      --------->ANAC58   <---
   --------->ANAC58  --------->YAB1<---------ATHB12   --------->ARR14(2)     --------->ANAC46 ------
   --------->ANAC58<---------TOE2(3)--------->YAB1    <---------ARR14(2)<----------ID1        <-----
 
cctcacaaacaacaacattgttaagaataatggcaccaatcaaagaattcatatccaaattctcagatttcaaaaacaacaagaaactcattctctcctc  20102300
                                                    <---------MYB52(2)
                                            <---------ALFIN1
--------->LBD16                             ----------->RAV1(1)
<------NtERF2                              <------NtERF2
------>NtERF2                             <---------ATERF1(1)
-------->RRTF1(3)                         --------->ABI4(1)
-------->RAP2.3(3)                        ------>NtERF2
-------->RRTF1(2)                        --------->RRTF1(3)
-------->ANAC46                          --------->RAP2.3(2)
-------->ANAC58                          --------->RRTF1(2)
-------->RAP2.3(2)                       --------->RAP2.6(2)
-------->RAP2.6(2)                       --------->DEAR3(1)
-------->DEAR3(1)                        <---------ATERF1(2)
-------->ANAC58                          --------->ATERF1(2)
------->RAP2.3(1)                        --------->RAP2.3(3)
------->RRTF1(1)           --------------------->WRI1
------>LBD16    --------->ATHB12         --------->DREB2C(2)
------>At4g35610-------->ATHB1           --------->ANAC46
-------ATERF1(1)--------->ATHB51        --------->RAP2.3(1)
--->NtERF2     --------->ICU4           --------->ERF1
----->ANAC46 --------------->AGL15      --------->ORA47(2)
----->DEAR3(1) <---------YAB1          <---------ATERF1(1)
------ALFIN1<-----------------AGL2 --------->ARR14(2)    --------->AtMYB61                         <
>ZmHOX2a(1) <-----------------AGL3 <---------GLK1(2)--------->MYB46(3)       <-----------GT1   <----
----ATERF1(1)<---------------AGL15 <---------ARR14(2)------->GAMYB           --------->YAB1   ------
 
cgccgcaatagccttgctattattggcctccatagtcggaatcgccgccacaacaacaaaccaaaacaaaaaccaaaaaatcacaactctatcttcgaca  20102400
                                                                                         -----------
                                                                                         --------->TGA2(2)
                                                                                        <-----------TGA1
                                                                                        <-----------HVH21
                                                                                       --------->TGA1a
                                                                    ------>NtERF2      --------->bZIP60(2)
                                                                    --------->MYB52(1) --------->ANAC58
                                                                   <---------ALFIN1    --------->ANAC46
                                                                  --------->MYB46(3)   --------->TGA2(1)
                                                                  <---------MYB55(2)   <---------TGA1a
                                                                  <---------ABI4(2)    <---------TGA2(1)
                                                                  --------->ATERF1(1)  --------->bZIP60(1)
                                                                 --------->At4g35610   --------->ANAC55(2)
                                                           <-----------HVH21           <---------bZIP60(1)
                                                           --------->LBD16             <---------bZIP60(2)
                                                          --------->DEAR3(1)           =============
                                                          --------->O2                 --------->O2
                                                          --------->TGA1a              <---------O2
                                                          <---------O2                 --------->ANAC58
                                                          ==============================bZIP_DOF
                                                          <---------ANAC46        <---------At4g35610
                                           <---------GLK1(1)     <------NtERF2    --------->ZAT2
                                           --------->GLK1(1)--------->ALFIN1 ---------->DOF2
                                           --------->ZAT2 <---------TGA1a    ====================bZIP_DOF
 --------->bZIP60(2)                       <---------At4g35610   <---------ATERF1(1)  ----------->STF1
 --------->ANAC58                       --------->LBD16 ------>NtERF2<------NtERF2--------->At4g35610
 --------->ANAC46       --------->ZAT2 --------->ANAC46 --------->LBD16    <------ZmHOX2a(1)   -----
 --------->ANAC58       <---------At4g35610<---------ZAT2 ==============================bZIP_DOF
 --------->ANAC55(1)    <---------ZAT2<---------LBD16  --------->ANAC46--------->LBD16<-----------STF1
---------ALFIN1         --------->At4g35610--------->At4g35610   <---------At4g35610----------->HVH21
-------HVH21 --------->GLK1(2)--------->ZAT6          <---------LBD16<---------LBD16----------->TGA1
--->bZIP60(1)--------->ARR11(3)   --------->ZAT14   <-----------GT1--------->DEAR3(1)<---------TGA2(2)
 
tcacacgccattctaaaatctgtttgcagctcaacactatacccggagctctgtttttccgccgtggcagccaccggaggaaaagagctgacgtcacaga  20102500
                               ---------->DOF2
                          <---------MYB111(2)
                          <---------MYB46(2)
                          --------->MYB46(3)
                          <---------MYB111(1)
                        ------>MYB46(1)                                  --------->HSFB2a(2)
                        --------->MYB52(1)                               <---------HSFB2a(2)
                        ------>MYB83 --------->At5g28300                ------>ZmHOX2a(2)
                      <---------MYB46(2)                          --------->At4g35610            <--
                      <---------MYB59--------->LBD16              <---------At4g35610            ---
                <---------ANAC55(2) <---------ANAC46             --------->GLK1(2)              ----
>HVH21      <-----------TGA1-------->P                    <-----------HVH21                    -----
======bZIP_DOF  --------->ANAC55(2) ----------->GT1    --------->At4g35610               -----------
----->DOF2  <-----------HVH21 --------->AtMYB61        <---------At4g35610          --------->DAG2<-
 
aagaagtcatcgaagcgtcacttaacctaactaccaaagccgtgaaacacaactacttcgctgtcaagaagctgatcgcgaagagaaaaggtttgacacc  20102600
                                                                    <---------MYB46(3)
                                                                  --------->ATERF1(1)
                                                                  <-------GAMYB
                                                                  <------NtERF2
                                                                <---------ANAC46
                                                                <---------ANAC58
                                                                <---------DEAR4(1)
                                                                <---------DREB2C(2)
                                                                <---------RAP2.6(2)
                                                                <---------ANAC58
                                                                <---------DEAR3(1)
                                                               <---------ABI4(1)
                                                             ----------->HVH21
                                                             --------->ALFIN1
                                                            ------->MYC3
                                                            <-------MYC4
                                                            <-------MYC3
                                                            <-------MYC2
          <---------DEAR3(1)                                ------->MYC2   ------>ZmHOX2a(2)
       --------->ANAC46                                     ------->PIF5 --------->ARR14(3)
       --------->ANAC58                                     <-------PIF5 --------->ARR14(2)
       <---------DEAR3(1)                                   ------->MYC4 <---------ARR14(2)
       <---------TGA1a                                     <---------TGA1a<------ZmHOX2a(2)
       =================bZIP_DOF                           <---------O2  <---------ARR14(3)
       <---------O2                                        --------->TGA1a======================HOX2a_HOX2a
       --------->TGA1a                                     --------->O2  --------->GLK1(2)
       --------->O2                                        ===============MYC_MYB                  -
     --------->MYB52(1)                                    --------->ANAC46=====================HOX2a_HOX2a
    ----------->HVH21                                      --------->PIF3(3)                      --
   <-----------HVH21                                       <---------PIF3(3)            --------->TOE2(3)
  <---------bZIP60(1)                                      >>>>>>>>>>HY5 <---------ARR11(3)       <-
  --------->bZIP60(1)                                <---------At4g35610 <-----------ARR10 ---------
-------ANAC46                                        --------->At4g35610<------ZmHOX2a(1)------>ZmHOX2a(1)
------>O2<---------ZAT18                        --------->At4g35610--------->ALFIN1  <---------ARR14(2)
----->LBD16------>NtERF2                        <---------At4g35610<---------AtMYB61 --------->ARR14(2)
---->DEAR3(1)<----------DOF2                   --------->MYB52(2)<---------MYB46(3)  <---------ARR11(3)
>HVH21 --------->ANAC58                      <---------MYB52(1)<------NtERF2     <---------ICU4   --
----------HVH21  --------->ANAC46     --------->ANAC46   <---------ALFIN1--------->ARR11(3)---------
 
gcgtgaggtcacggcgcttcacgactgtttggagacaatcgacgagacgttagatgagctccacgtggcggtggaggatcttcatcagtatcctaagcaa  20102700
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AGI:  At1g53830.1   
Description:  ATPME2 (Arabidopsis thaliana pectin methylesterase 2). Identical to Pectinesterase-2 precursor (PME2) [Arabidopsis Thaliana] (GB:Q42534;GB:Q9SSB0); similar to ATPME3 (Arabidopsis thaliana pectin methylesterase 3) [Arabidopsis thaliana] (TAIR:AT3G14310.1); similar to pectin methyl esterase [Solanum tuberosum] (GB:AAF23892.1); similar to pectin methyl-esterase [Nicotiana benthamiana] (GB:AAO85706.1); similar to pectin methylesterase [Nicotiana tabacum] (GB:CAB95025.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase
Range:  from: 20102190    to: 20104557    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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