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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                            --------->AtMYB61
                                                <----------DOF2       <-----------GT1
                                               <---------DAG2      --------->bZIP60(1)
 <-----------GT1 --------->At4g35610    --------->ARR11(3)         <---------GLK1(1)           <----
----------DOF2   <---------At4g35610  --------->ICU4 ---------->ID1--------->GLK1(1)        <-------
---YAB1<----------DOF2--------->TOE2(3) <---------GLK1(2)          <---------bZIP60(1)  <---------MYB52(1)
 
ttctttacctctttctcttcatctcccttaaacaacttgtaaagattatgccttttctcgttttgctctgatatcacaacctctcccttctgttttttct  19959900
      --------->ARR14(2)                                                             <<<<<<<<<TBF1
      <---------ARR14(2)                                                          <<<<<<<<<TBF1
   <---------TOE2(2)                                                           <<<<<<<<<TBF1
   <---------TOE1(2)                         <---------HSFB2a(2)            <<<<<<<<<TBF1
------DOF2                         <----------DOF2  <----------DOF2   <---------ANAC58
----GT1     --------->GLK1(1)  <-----------GT1 ---------->DOF2        <---------ANAC58            <-
 
ttctcacaggttccgatttcttcagttctatgagtttcctttccaattccaaaagctttctcttcaactcgttgccttcttcttcttcttcttcgatttc  19960000
                                                                                                ----
                                                                                               -----
                                                                                              <<<<<<
                                                                                              <-----
                                                         <---------YAB1              --------->HSFB2a(2)
     <---------YAB1      --------->MYB46(3)          <---------ANAC58                <---------HSFB2a(2)
    <-----------------AGL2                           <---------ANAC58               <---------LBD16
    <-----------------AGL1------->GAMYB              <---------ANAC46             --------->GLK1(2)
--------TOE1(2)        ----------->RAV1(1)      --------->ALFIN1             ---------->DOF2--------
 
gctcgtttctgatttgggtctcaatccaacagcctcttcgaagaaaacagagagtggcttcttataagcttcttccgatgtaaagtttctggagacaatc  19960100
      <----------DOF2
   --------->ANAC58
   --------->ANAC58
   <------NtERF2
  ------>NtERF2                                                 <---------ARR14(2)
 <---------ANAC46                                               --------->ARR14(2)
 <---------ANAC58                                               <---------GLK1(2)
 <---------ANAC58                                           --------->At4g35610
------>DOF2                                                 <---------At4g35610          --------->ZAT2
---->YAB1                                               ------>ZmHOX2a(2)                <---------ZAT2
<<<ARR2                                                <---------At4g35610               --------->At4g35610
----ATHB12<---------TOE2(3)                            --------->At4g35610               <---------At4g35610
->WOX13(1)<---------TOE1(3)     ---------->DOF2       <---------AGP1           ---------->DOF2     <
 
aaaggcgcgcattgaggtttcaagagagtcttaaacaaagtttgatttttgagaattgatctgagcagaatcgccatggcttcaaaggagtcagcttgcg  19960200
                                    --------->ANAC46          --------->GLK1(2)
                                    --------->ANAC58         --------->ARR14(2)           <---------HSFB2a(2)
                                  ---------->DOF2      ------->GAMYB             ---------->DOF2
                      --------->YAB1--------->ANAC58  --------->MYB46(3)      --------->ANAC58
                    <---------WOX13(1)  --------->ANAC58     <---------GLK1(2)--------->ANAC46
             <-------TEIL--------->YAB1 --------->ANAC58   ----------->ARR10  --------->ANAC58
            --------->GLK1(2) --------->MYB46(3)     -------->P             --------->CCA1(2)      *TSS
---------ATHB12     <---------YAB1<---------ATHB12 --------->MYB46(3)    ----------->ARR10--------->HSFB2a(2)
 
aaatcaatttgtgagattcagtgattaatagtaaccaataagccagccattggagcaaccgagagattctctagagaagagacgcaaagggttttagaag  19960300
                                                               --------->AHL20(1)
                                                               <---------AHL20(2)
                                                   ------>MYB83--------->AHL20(2)
                                                 --------->AtMYB61
                                                --------->MYB46(3)        --------->LBD16
                                              ------>MYB83--------->AHL20(2)
                                              ------>MYB46(1)  <---------AHL20(1)                 <-
              --------->ANAC46              --------->AtMYB61 --------->AHL20(2)  <---------TOE2(3)
      <---------GLK1(2)                     <---------MYB59   <---------AHL20(2)  --------->MYB59 <-
     -------->HAHB4                 <---------AHL20(2)----------->GT1    <---------HSFB2a(2)    <---
    --------->ICU4     --------->YAB1--------->YAB1------>MYB46(1)       --------->HSFB2a(2)<-------
    <---------ATHB12   --------->AHL20(2)<-----------GT1  <---------AHL20(2)      <---------TOE1(3)
    <---------YAB1  --------->YAB1 --------->AHL20(2) --------->LBD16   <---------LBD16 ------------
 
agaagaaatgattctccaaaccagaataatatagaacatataataaaccaaaccatccggtttaattaaatttgtaccggaaatttaggtttccaatcgt  19960400
      --------->ANAC58                                             --------->YAB1
--------->GLK1(1)                                                  --------->ATHB51
-----NtERF2                         ----------->GT1               <---------ATHB12                 <
--------------------WRI1           <---------HSFB2a(2)<---------AHL20(2)              <---------TOE2(3)
------DEAR3(1)                     --------->HSFC1(1) --------->AHL20(1)             <---------DOF5.7(2)
--ATHB12    <---------ZAT18        --------->HSFB2a(2)--------->AHL20(2)            <---------WRKY12
>CBF  --------->ANAC58          <---------ARR14(2)   --------->AHL20(2)    ---------->DOF2    <-----
 
cggagttgcaaacaatgcacaaattgcacatcgtcgatctagaaaattttcaaaaaaaaaattagaccaattatcgagtaaagggtgtcaacgttgcaca  19960500
                                                                                                  --
                                                                                                  --
                                                                      <---------AHL20(2)         <--
                                                                  <---------ICU4                 ---
        ----------->ARR10                                         --------->ATHB12               <--
   <---------YAB1                                                <---------YAB1                 <---
   --------->AtLEC2           --------->TOE2(3)                  <---------ATHB12              -----
--------->WRKY18(1)           <----------DOF2                    --------->ICU4           ------>MYB46(1)
-----------HVH21     <---------ANAC58                           <---------TOE2(3)         ------>MYB83
------RAV1(2)        <---------ANAC58    ----------->HVH21     --------->YAB1          --------->DEAR3(2)
 
ggggtcatgctaatattctctgtatcgttccaactttagtgaaggtgacagtctcatcttcgactctaatgatttttttttttttgtcaaaccgactcta  19960600
       <-----------GT1
   <---------TOE2(3)
<---------YAB1
------->YAB1
------>HAHB4
-------YAB1
------>ICU4                                   <---------YAB1                        --------->At4g35610
-------ATHB12                             <----------DOF2                    <---------AHL20(2)
------TOE2(3)                     --------->CCA1(2)                          --------->AHL20(2)
---->YAB1   <----------DOF2--------->CCA1(2)  <---------TOE2(3)             --------->YAB1
 
atgataaatgttactcttttcacttgtaagataagcgatatgggactttaagatagaacaagagttgaatattgggctattttaatgaactgaatgagcc  19960700
                          --------->CCA1(2)
                         <---------ARR14(2)                                                    -----
                         --------->ARR11(1)            --------->CCA1(2)                       <----
                         --------->ARR11(3)           --------->AHL20(1)                      <-----
                       ----------->ARR10              <---------ARR11(3)                      <-----
                    <---------MYB52(1)                --------->ARR11(3)                      ------
             --------->MYB59                          <---------AHL20(1)                      <-----
 <---------TOE2(3) <-------GAMYB                <---------REM1(1)      --------->YAB1         ------
 
caataagataactagttaggcccgttgagatatggaaagtttttttttctggtgtaagatattggattagtcatttataaaaaaaaacttacaatctccc  19960800
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AGI:  At1g53460.1   
Description:  structural molecule. similar to unnamed protein product [Vitis vinifera] (GB:CAO39428.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60929.1); contains InterPro domain Vinculin/alpha-catenin; (InterPro:IPR006077)
Range:  from: 19958158    to: 19960300    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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