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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AtMYB61
<----------
DOF2
<-----------
GT1
<---------
DAG2
--------->
bZIP60(1)
<-----------
GT1
--------->
At4g35610
--------->
ARR11(3)
<---------
GLK1(1)
<----
----------
DOF2
<---------
At4g35610
--------->
ICU4
---------->
ID1
--------->
GLK1(1)
<-------
---
YAB1
<----------
DOF2
--------->
TOE2(3)
<---------
GLK1(2)
<---------
bZIP60(1)
<---------
MYB52(1)
ttctttacctctttctcttcatctcccttaaacaacttgtaaagattatgccttttctcgttttgctctgatatcacaacctctcccttctgttttttct
19959900
--------->
ARR14(2)
<<<<<<<<<
TBF1
<---------
ARR14(2)
<<<<<<<<<
TBF1
<---------
TOE2(2)
<<<<<<<<<
TBF1
<---------
TOE1(2)
<---------
HSFB2a(2)
<<<<<<<<<
TBF1
------
DOF2
<----------
DOF2
<----------
DOF2
<---------
ANAC58
----
GT1
--------->
GLK1(1)
<-----------
GT1
---------->
DOF2
<---------
ANAC58
<-
ttctcacaggttccgatttcttcagttctatgagtttcctttccaattccaaaagctttctcttcaactcgttgccttcttcttcttcttcttcgatttc
19960000
----
-----
<<<<<<
<-----
<---------
YAB1
--------->
HSFB2a(2)
<---------
YAB1
--------->
MYB46(3)
<---------
ANAC58
<---------
HSFB2a(2)
<-----------------
AGL2
<---------
ANAC58
<---------
LBD16
<-----------------
AGL1
------->
GAMYB
<---------
ANAC46
--------->
GLK1(2)
--------
TOE1(2)
----------->
RAV1(1)
--------->
ALFIN1
---------->
DOF2
--------
gctcgtttctgatttgggtctcaatccaacagcctcttcgaagaaaacagagagtggcttcttataagcttcttccgatgtaaagtttctggagacaatc
19960100
<----------
DOF2
--------->
ANAC58
--------->
ANAC58
<------
NtERF2
------>
NtERF2
<---------
ARR14(2)
<---------
ANAC46
--------->
ARR14(2)
<---------
ANAC58
<---------
GLK1(2)
<---------
ANAC58
--------->
At4g35610
------>
DOF2
<---------
At4g35610
--------->
ZAT2
---->
YAB1
------>
ZmHOX2a(2)
<---------
ZAT2
<<<
ARR2
<---------
At4g35610
--------->
At4g35610
----
ATHB12
<---------
TOE2(3)
--------->
At4g35610
<---------
At4g35610
->
WOX13(1)
<---------
TOE1(3)
---------->
DOF2
<---------
AGP1
---------->
DOF2
<
aaaggcgcgcattgaggtttcaagagagtcttaaacaaagtttgatttttgagaattgatctgagcagaatcgccat
ggcttcaaaggagtcagcttgcg
19960200
--------->
ANAC46
--------->
GLK1(2)
--------->
ANAC58
--------->
ARR14(2)
<---------
HSFB2a(2)
---------->
DOF2
------->
GAMYB
---------->
DOF2
--------->
YAB1
--------->
ANAC58
--------->
MYB46(3)
--------->
ANAC58
<---------
WOX13(1)
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC46
<-------
TEIL
--------->
YAB1
--------->
ANAC58
----------->
ARR10
--------->
ANAC58
--------->
GLK1(2)
--------->
MYB46(3)
-------->
P
--------->
CCA1(2)
*
TSS
---------
ATHB12
<---------
YAB1
<---------
ATHB12
--------->
MYB46(3)
----------->
ARR10
--------->
HSFB2a(2)
aaatcaatttgtgagattcagtgattaatagtaaccaataagccagccattggagcaaccgagagattctctagagaagagacgcaaagggttttagaag
19960300
--------->
AHL20(1)
<---------
AHL20(2)
------>
MYB83
--------->
AHL20(2)
--------->
AtMYB61
--------->
MYB46(3)
--------->
LBD16
------>
MYB83
--------->
AHL20(2)
------>
MYB46(1)
<---------
AHL20(1)
<-
--------->
ANAC46
--------->
AtMYB61
--------->
AHL20(2)
<---------
TOE2(3)
<---------
GLK1(2)
<---------
MYB59
<---------
AHL20(2)
--------->
MYB59
<-
-------->
HAHB4
<---------
AHL20(2)
----------->
GT1
<---------
HSFB2a(2)
<---
--------->
ICU4
--------->
YAB1
--------->
YAB1
------>
MYB46(1)
--------->
HSFB2a(2)
<-------
<---------
ATHB12
--------->
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<---------
TOE1(3)
<---------
YAB1
--------->
YAB1
--------->
AHL20(2)
--------->
LBD16
<---------
LBD16
------------
agaagaaatgattctccaaaccagaataatatagaacatataataaaccaaaccatccggtttaattaaatttgtaccggaaatttaggtttccaatcgt
19960400
--------->
ANAC58
--------->
YAB1
--------->
GLK1(1)
--------->
ATHB51
-----
NtERF2
----------->
GT1
<---------
ATHB12
<
--------------------
WRI1
<---------
HSFB2a(2)
<---------
AHL20(2)
<---------
TOE2(3)
------
DEAR3(1)
--------->
HSFC1(1)
--------->
AHL20(1)
<---------
DOF5.7(2)
--
ATHB12
<---------
ZAT18
--------->
HSFB2a(2)
--------->
AHL20(2)
<---------
WRKY12
>
CBF
--------->
ANAC58
<---------
ARR14(2)
--------->
AHL20(2)
---------->
DOF2
<-----
cggagttgcaaacaatgcacaaattgcacatcgtcgatctagaaaattttcaaaaaaaaaattagaccaattatcgagtaaagggtgtcaacgttgcaca
19960500
--
--
<---------
AHL20(2)
<--
<---------
ICU4
---
----------->
ARR10
--------->
ATHB12
<--
<---------
YAB1
<---------
YAB1
<---
--------->
AtLEC2
--------->
TOE2(3)
<---------
ATHB12
-----
--------->
WRKY18(1)
<----------
DOF2
--------->
ICU4
------>
MYB46(1)
-----------
HVH21
<---------
ANAC58
<---------
TOE2(3)
------>
MYB83
------
RAV1(2)
<---------
ANAC58
----------->
HVH21
--------->
YAB1
--------->
DEAR3(2)
ggggtcatgctaatattctctgtatcgttccaactttagtgaaggtgacagtctcatcttcgactctaatgatttttttttttttgtcaaaccgactcta
19960600
<-----------
GT1
<---------
TOE2(3)
<---------
YAB1
------->
YAB1
------>
HAHB4
-------
YAB1
------>
ICU4
<---------
YAB1
--------->
At4g35610
-------
ATHB12
<----------
DOF2
<---------
AHL20(2)
------
TOE2(3)
--------->
CCA1(2)
--------->
AHL20(2)
---->
YAB1
<----------
DOF2
--------->
CCA1(2)
<---------
TOE2(3)
--------->
YAB1
atgataaatgttactcttttcacttgtaagataagcgatatgggactttaagatagaacaagagttgaatattgggctattttaatgaactgaatgagcc
19960700
--------->
CCA1(2)
<---------
ARR14(2)
-----
--------->
ARR11(1)
--------->
CCA1(2)
<----
--------->
ARR11(3)
--------->
AHL20(1)
<-----
----------->
ARR10
<---------
ARR11(3)
<-----
<---------
MYB52(1)
--------->
ARR11(3)
------
--------->
MYB59
<---------
AHL20(1)
<-----
<---------
TOE2(3)
<-------
GAMYB
<---------
REM1(1)
--------->
YAB1
------
caataagataactagttaggcccgttgagatatggaaagtttttttttctggtgtaagatattggattagtcatttataaaaaaaaacttacaatctccc
19960800
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AGI:
At1g53460.1
Description:
structural molecule. similar to unnamed protein product [Vitis vinifera] (GB:CAO39428.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60929.1); contains InterPro domain Vinculin/alpha-catenin; (InterPro:IPR006077)
Range:
from: 19958158
to: 19960300
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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