Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ARR11(3)                       --------->ARR11(3)                      <---------CCA1(2)                ----------->GT1               --------->DAG2              --------->TOE1(3)                            <---------MYB52(1)              ---------->DOF2   <---------ANAC58                            --------->DAG2           --------->YAB1       <---------ANAC58                           ---------->DOF2         --------->MYB52(1)    <---------TOE1(2)                      --------->YAB1   <----------DOF2       <---------MYB52(2)     ------>ZmHOX2a(1)                  ------>ZmHOX2a(2)    --------->TOE2(3) -------->TOE2(3)   --------->AHL20(2)     --------->TOE2(3)    <---------------------WRI1   aatctcaaaactaacataaagtttaaatcttcctgcgtttcaaaaccctaactaatctaatccatgatcgaatcaaaaaaagttgaaacctttagtcaat  19891500                                                                                 ====================                                                                                 ------>ZmHOX2a(2)                                                                                 ====================                                                                                =====================                                                                                =====================                                                                                <------ZmHOX2a(2)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                               --------->AGP1                                       ----------->GT1                         <---------ARR14(3)                                       <----------ID1                          <-----------ARR10                                     --------->DAG2                            --------->ARR14(3)                          ------>ZmHOX2a(2)                                   --------->GLK1(1)                         <------ZmHOX2a(2)                                    <---------GLK1(1)                        <---------ARR11(3)                                 --------->LBD16        ---                        <---------ARR14(2)                                --------->ANAC46        ===                        --------->ARR14(2)                               <---------LBD16         <---                        <---------ARR14(3)                       <-------TEIL----------->ARR10-------                        --------->ARR11(3)                   <---------------AtSPL3           <------                        --------->ARR14(3)                   --------------->AtSPL3          <-------                       <------ZmHOX2a(1)<-----------HVH21    <---------------AtSPL8  <---------At5g28300                    <---------LBD16---------->DOF2    ----------->GT1 <-----------HVH21  --------->AtLEC2   actcaaaacagagcatgtagtttcaggatcttatagcaaaagggtcaaatccaaaatggagaaaacgtacagtttcacggagatcttcaccgtgcaaatc  19891600         <---------HSFB2a(2)         --------->HSFB2a(2)     --------->GLK1(1)     <---------GLK1(1)    --------->ARR11(3)    --------->ARR14(2)    <---------ARR11(3)    <---------ARR14(2)      ---------->DOF2   <------ZmHOX2a(1)     --------->ANAC58   =======================HOX2a_HOX2a ====HOX2a_HOX2a         --------->ANAC58 =========HOX2a_HOX2a<---------HSFB2a(2) ====HOX2a_HOX2a     --------->HSFB2a(2) =========HOX2a_HOX2a<---------HSFC1(1)                                           ----------->HVH21 --->ZmHOX2a(1)    <------ZmHOX2a(2)            <---------ANAC58                --------->At4g35610 =========================HOX2a_HOX2a           <---------ANAC58           <---------ARR14(2) ------LBD16      --------->AGP1       --------->ANAC58                    --------->ARR14(2) -->ARR14(2)      --------->ARR14(2)   --------->ANAC46                <---------LBD16          ----- ---ARR14(2)      <---------ARR14(2)   --------->ANAC58   <---------ZAT14 <------ZmHOX2a(1)   ------- --GLK1(1)   <---------ARR14(2)    --------->YAB1   ---------->ID1<----------DOF2 --------->WRKY12 --   ctggaggatatcgagaaaccgatctagaagcaaagcatcatactcaacaagcttgtcgtcttcactaactttgccaggaaccagttgacgaagatgaaca  19891700                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                                                             <---------YAB1                                                                           <---------ICU4                                                                          <---------ATHB51          <                                                                          --------->AHL20(2)        -                                                                          <---------AHL20(2)        -                                          ----------->RAV1(2)             --------->ICU4            <                                          <---------At4g35610            --------->AHL20(2)     -----                             --------->ANAC58                        --------->YAB1    ------>ZmHOX2a(2)                             --------->ANAC58                      ------>MYB83---------->DOF2 <----- <---------ATHB12         --------->ARR14(2)                       ------>MYB46(1)    <------ZmHOX2a(2) ---->TOE2(3)  --------->HSFB2a(2)      <-----------GT1          <---------MYB59     <---------ARR14(2) >TEIL------>NtERF2       <---------GLK1(2)                      --------->AtMYB61   --------->ARR14(2) ------->WOX13(1)         <---------ARR14(2)           --------->ZAT14   <---------AHL20(1)    ------   tcaatcgatgccatcttctctaacttccgattcgccattttttcacctgcttcgctctgaagtaagaccaaacaaaataattaaagggatccaaaaatta  19891800    ---------->DOF2  ------>ZmHOX2a(2) <------ZmHOX2a(2) --------->CCA1(2)                                                                    --------->MYB52(1) ---------ARR11(3)                                                             ------->GAMYB -------->ARR11(3)                                                           --------->At4g35610    - -------->AGP1                                                              ========================= ---------AGP1                <---------DEAR3(1)                            ----------->RAV1(1) <---- ----->DOF2                  <---------------------WRI1                    <---------WRKY12     ----- ----AHL20(2)           <---------GLK1(1)               ---------->DOF2    <---------WRKY38(1)<------ --->AHL20(2)          --------->ARR11(3)     ----------->GT1       <----------DOF2 <---------MYB52(2)   aagatctaaagacaaaattgactgagatttcggcgatgaaatcggagacagaaaataagaaagtcggaaactttgagtcaacagaaacaaacagacccag  19891900                     --------->LBD16                                 <---------------AGL15            <---------YAB1                                           --------------->AGL15          --------->At4g35610                                       <-----------------AGL2      --------->ARR11(3)                                            ----------------->AGL2      <---------ARR11(3)                                            ----------------->AGL3      <---------ARR14(2)    --------->DAG2                          =================================      --------->ARR14(2)   ---------->DOF2                         -------->P      --------->GLK1(2)  <------ZmHOX2a(1)              --------->ALFIN1   <---------HSFB2a(2) ---------->GT1    --------->ZAT18            --------->ALFIN1  <---------MYB52(2) =====RAV <---------At4g35610----------->GT1  <---------ANAC58 --------->At4g35610 -----At4g35610    <---------ZAT14            <---------ANAC58--------->GLK1(2)                <----- ---->At4g35610    --------->ZAT14          *TSS      --------->ALFIN1     --------->HSFB2a(2) ------ -----RAV1(2)      <---------LBD16          --------->ALFIN1  <-----------ARR10    ---------->DOF2   atgagaaaaatctgctgatagtgcggaggaaaagtaaatctaacaagtgtgtgtgtgtgtggagaagctaaccagttatagaagtaaaagctgtgtcctt  19892000                                                          <---------------AGL15                                                          --------------->AGL15                                                         <-----------------AGL3   <---------WOX13(1)                 --------->GLK1(1)                       ----------------->AGL3 --------->ATHB12                 <---------GLK1(1)                  <---------ANAC58           <---------YAB1          <---------GLK1(2)                 --------->ARR11(3)                 --------->ICU4          --------->ARR14(2)          --------->YAB1<---------ANAC58         --------->YAB1         --------->At4g35610<---------ANAC55(2)<---------ANAC58             <------ZmHOX2a(2)    --------->WOX13(1)     <-------TEIL   ----------->ARR10                 =====================HOX2a_HOX2a =========================================================================MADS_MADS       ------>ZmHOX2a(1) -----DOF2<---------ARR14(2)--------->ANAC55(2)<---------ANAC58            --------->ARR11(3) >ZmHOX2a(1)<-------TEIL  --------->CCA1(2) <---------ARR11(3)             <---------ARR11(3)   tgaagtcagtcagattcagatttcagagatacataaccaaaaataagatacttggcttacctatatatagagagtgagatcatgatggattcctatacat  19892100                                                                                            ---------                                                                                            ---------                                                                                         <---------AHL20(2)                                                                                        --------->AHL20(1)                                             <----------DOF2                           <---------AHL20(2)                                            <---------DAG2                         <---------AHL20(2)                                            --------->TOE2(3)                ------>ZmHOX2a(1) <-----                                    --------->ICU4<-----------GT1   <----------DOF2--------->AHL20(2)                           <---------YAB1<-----------GT1--------->ATHB12    --------->TOE2(3)<-------                        <----------DOF2 <-----------GT1 <---------ICU4   <-----------GT1<---------AHL20(1)   tattctatttctatatgtgatgctcgcttatagttggaatttttaacctttttttccatgatttctatctctttttttcctcaatttatatatatttatt  19892200                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(1)                                                                             --------->ATHB12                                                                            <---------YAB1                <---------AHL20(2)       --------->ATHB12                   --------->ICU4               <---------YAB1           <---------YAB1                    --------->YAB1            <---------RVE1(1)       <---------GLK1(2)                    <---------YAB1      -------- >ICU4     <---------GLK1(2)        --------->ARR11(3)          ---------->DOF2 --------->AHL20(2) >AHL20(2) --------->ARR11(3)       <---------ARR11(3)        --------->ANAC58  <---------AHL20(2) ----YAB1----------->ARR10  ---------->DOF2    ------->TEIL   --------->ANAC58 <---------WOX13(1) --AHL20(2)<---------ARR11(3)      <---------RVE1(1) <---------ZAT6     --------->AHL20(1)  <--------   aatgcattgagaagatttttatttatgtataaaagagagattttcattgaatctagtgatagtcaagaaagaaatattatgattaattaatttttgtgga  19892300                                            <---------AHL20(2)                                    <---------YAB1                                  <---------AHL20(2)                                 <---------YAB1                                                  <---                                <---------AHL20(2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             --------->ARR11(3)                --------->YAB1                   -----                             <---------ARR11(3)            --------->AHL20(1)                  ------                             <---------AHL20(1)            --------->AHL20(2)                  <-----                             --------->AHL20(1)            <---------AHL20(2)                  <-----                           <---------AHL20(2)          --------->AHL20(2)                      <-----                           --------->AHL20(1)          <---------AHL20(2)                      <-----                           <---------AHL20(1)    ----------->GT1   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->AHL20(2)    --------->AHL20(2)  <---------AHL20(1) --------->AHL20(2)     <-------TEIL  - ->HSFB2a(2)          --------->TOE2(3)     --------->AHL20(1) <---------AHL20(2)    --------->AtLEC2 -LBD16            --------->AHL20(2)  --------->AHL20(2) --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   acaaaaaaataaccaaaacaataacataaaatatttttatttttaatatatcagtaaaaaattaattatatcacttatgtaaacaacatgcattcttccg  19892400  Previous    Next  AGI:  At1g53310.1    Description:  ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1); phosphoenolpyruvate carboxylase. Identical to Phosphoenolpyruvate carboxylase 1 (PPC1) [Arabidopsis Thaliana] (GB:Q9MAH0;GB:Q546E4); similar to ATPPC2 (PHOSPHOENOLPYRUVATE CARBOXYLASE 2), phosphoenolpyruvate carboxylase [Arabidopsis thaliana] (TAIR:AT2G42600.1); similar to ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3), phosphoenolpyruvate carboxylase [Arabidopsis thaliana] (TAIR:AT3G14940.1); similar to ATPPC2 (PHOSPHOENOLPYRUVATE CARBOXYLASE 2), phosphoenolpyruvate carboxylase [Arabidopsis thaliana] (TAIR:AT2G42600.2); similar to phosphoenolpyruvate carboxylase [Brassica juncea] (GB:CAA11415.1); simi Range:  from: 19887695    to: 19891944    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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