Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ICU4                                                              <-----------GT1             --------->YAB1                                  <-----------GT1            <---------YAB1                                  <---------AHL20(2)          ------>ZmHOX2a(1)                        ----------->RAV1(1)------>ZmHOX2a(1)         --------------->AGL15                    --------->ANAC46   <---------------AGL15         ============================================================================MADS_MADS     <-   <---------AHL20(2)                 <---------AHL20(2)    --------->AHL20(2)       <-----------HVH21  --------->AHL20(2)           ----------->GT1  --------->AtMYB61    --------------->AGL15      -----   cattttaaattcctattatagccttacaaaaatgtgttatattatttggaccacaacataatttaaacattcctcttgaagaaaattggtcacttcaaaa  19786800                                                                     <---------TOE2(3)     <---------YAB1                                          <---------ARR14(2)       ---------->DOF2      <----------DOF2                                          --------->ARR14(2)   --------->ANAC58    <---------ANAC58              --------->WRKY38(1)     <-----------------AGL1   --------->ANAC46    <---------ANAC58 ---------ID1 --------->WRKY12       <-----------GT1           --------->ANAC58<----------DOF2     <- ----->DOF2 <----------DOF2          <---------AHL20(2)        <----------ID1  <---------DAG2     ---   aagaacaaaattcactttgacctcatggtttacttatatttacatatatggcccaaaaccaaaatacgaaaaaggttttagctttacgttcttttgattc  19786900                         <---------AtLEC2                         <---------ANAC58                         <---------ANAC46                         <---------ANAC58                     <---------ANAC58                     <---------ANAC58                    --------->MYB52(2)                 <-------MYC3                 ------->MYC3                --------->O2                              --------->DAG2             --------->MYB46(3)                          ---------->DOF2           <-----------GT1--------->LBD16             --------->YAB1     <------NtERF2  <---------MYB46(3)               <---------YAB1                  ----------->GT1   <---------DEAR3(1)<---------ANAC46            <---------GLK1(2)                 --------->ZAT14 --------TOE1(2)--------->ANAC46               <---------YAB1----------->GT1       <---------ZAT14 --->ZmHOX2a(1) <---------O2  ---------->DOF2  --------->ICU4<----------ID1  <---------ALFIN1    ----   ctaggtcgtcgtttaaccacgttgcttgcgtggaaagagaagagaagtgaagattatcaaaaagcgaaaaataaaaccctcactgtgaagtaaaaatcgt  19787000                                          ------->TEIL <----------DOF2                              <                                          --------->GLK1(2)                                         -                                   <---------AHL20(2)  <---------DAG2                               -                                  <---------ICU4      <---------ANAC58                         ------                              <---------AHL20(2) --------->ATHB12                         <----------                              --------->AHL20(2) <---------ICU4                           -----------                             <---------AHL20(2) <---------YAB1                            -----------                           --------->GLK1(2) <---------YAB1                          <---------MYB46(3)                       --------->LBD16 <---------YAB1 <---------ANAC58            --------->ALFIN1  < ----->SPL7<---------GLK1(1) --------->AHL20(2) --------->ICU4                  <---------ANAC46   <-   aggcccaaaatagatttctcttagccgagaatttaatttttatgaatctgattattgcttttctacgaactcagtttttgcgatgtgtggttctcaaaaa  19787100              --------->ABI4(2)  ------>ZmHOX2a(2) ---------ARR14(2) -------->ARR14(2) -------->ARR11(3) ---->DOF2<---------DEAR3(1) -----AGL15<---------ANAC58                                    <---------DAG2 ------>AGL3  ------>NtERF2                                    <----------DOF2         <---------ZAT14 ---->AGL15<---------ANAC58                     <---------CCA1(2)   <----------DOF2    --------->ZAT14 ---------ARR11(3)                        <<<<<<<<<TBF1    ---------->ID1----------->TBP      ------- -----ZmHOX2a(1)                       <<<<<<<<<TBF1    <<<<<<<<<TBF1  --------->AHL20(2)  <---------ZAT6   aggatcgtttcttcggtgcctcttagtctctcaagtacttcttcttcttcttatcttcttcttcgcttttcttttatatatagagagagtttagtggtca  19787200                                                                      ---------->ID1                                                                    <---------AtMYB61                                                       <---------AHL20(2)                           -          *TSS                                        --------->AHL20(1)                            -       ------>ZmHOX2a(1)                              <---------AHL20(1)                            - --------->HSFC1(2)                                   --------->AHL20(2)                          <-- --------->At4g35610                                  --------->ARR11(3)                          --- <---------HSFC1(2)                                   <---------ARR11(3)                          --- --------->HSFB2a(1)    --------->ANAC55(2) <---------YAB1 <-----------GT1        ---------->DOF2 <-- <---------HSFB2a(1)<----------DOF2        --------->AHL20(2)<-----------------AGL2       <----------DOF2 -->WRKY18(1)   ---------->ID1   <---------TOE2(3)    <---------AHL20(2)       <-----------HVH21 ----   agaagcttcctcgtgtttgtctctttatgtaatcaaaggttgcatttttattcgaatatattttctggttttggtgttttctgtcaaagggtcttttaaa  19787300         <---------ANAC58         <---------ANAC58      <----------DOF2 -------->TOE2(3) -------->YAB1 -------->TOE1(3)                                                                             <------ZmHOX2a(1) ---------ARR10                 <-----------GT1                  --------->YAB1           --------->LBD16 ------>GLK1(2)            <----------DOF2                      =====================================HOX2a_HOX2a ------>ARR11(3)           <---------DAG2                       <------ZmHOX2a(2)     --------->ARR14(2) -------ARR11(3)        <-----------GT1                        --------->ARR11(3)     --------->GLK1(2) ----->RVE1(1)        <----------DOF2              <----------DOF2                    <---------ARR14(2)   aatcttaactttcgttctaaatttctttactttatttcgattctaacttagggcttttgggctgggatcatgaaatgaagtattgcagaatccagaggag  19787400             <---------ATHB12           --------->WOX13(1)              <------ZmHOX2a(1)         <---------YAB1                --------->LBD16         <---------ATHB12             <---------HSFB2a(2)    <------MYB83                      --------->HSFB2a(2)    <------MYB46(1)                   <-----------RAV1(2)                                      <-----   --------->MYB59           --------->GLK1(2)       <---------ALFIN1               --------->HSFC1(2)   --------->MYB46(2)       <---------GLK1(2)   <-----------GT1                     <---------HSFC1(2)   tttgtttggtaatcaatgaagggttcttcagaatctagttccagaggattaaacaacacctctggtgtttcagagttttgtacagatggttctaagtctt  19787500                     <---------HSFC1(2)                     --------->HSFC1(2)                            <---------YAB1                     --------->At4g35610                         <---------ICU4                  <---------At4g35610                            --------->YAB1              <-----------HVH21       ---------->DOF2           <---------YAB1                     <-        --------->YAB1    <---------ANAC58               <------ZmHOX2a(1)   <-----------HVH21    <-- -----DOF2 <---------ICU4 <---------ANAC58  --------->At4g35610 --------->ICU4       <----------DOF2   tgtctcacattgattatgtcagaagcttacttggttcacataaagaagctaacttgggaggacttgatgatgactctattgtcagagctttggaatgtga  19787600           <-----------HVH21           <-----------TGA1          <---------ANAC58                           <---------ANAC58                              --          <---------ANAC46                           <---------ANAC46                              <-          <---------ANAC58                           <---------ANAC58                            ----      <---------ANAC58                           <----------DOF2                                 <---      <---------ANAC58                   <---------MYB52(1)                                      <---     --------->At4g35610              ------>ZmHOX2a(2)                                  <---------YAB1     <---------At4g35610             <------ZmHOX2a(2)                             <---------TOE2(3) ----------ARR10 <---------MYB46(3) --------->ARR14(2)                        <---------MYB46(3) ---- ----ZmHOX2a(1)  --------->MYB55(2) <---------ARR14(2)                      <---------GLK1(2)   -----   ggatgttagcttgcgtcagtggttagacaatccagaccgatccgttgatgcctttgagtgttttcatgttttcagacagattgttgagattgttaatgca  19787700  Previous    Next  AGI:  At1g53090.1    Description:  SPA4 (SPA1-RELATED 4); signal transducer. similar to SPA3 (SPA1-RELATED 3), signal transducer [Arabidopsis thaliana] (TAIR:AT3G15354.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39286.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69753.1); similar to hypothetical protein OsI_003524 [Oryza sativa (indica cultivar-group)] (GB:EAY75677.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contain Range:  from: 19787210    to: 19790570    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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