Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->DAG2                        --------->At4g35610  ---------->DOF2                      =======================HOX2a_HOX2a            <-------GAMYB                 --------->YAB1           --------->MYB111(2)         --------->YAB1                                        <-------           <---------MYB46(3)          <--------HAHB4                                        --------           --------->MYB46(2)         <------ZmHOX2a(2)      <---------ARR11(3)             <--------          <--------P  <------ZmHOX2a(1)<---------ICU4        --------->ARR11(3)       <-------TEIL         <---------MYB52(1)  <---------ARR11(3)   --------->RAP2.6(2)             --------->DAG2      <-----------RAV1(2) ----------->GT1<---------YAB1--------->AtLEC2          ---------->DOF2   aactctcttcaggtagttgaagaaggagcggtatctttggatcattataaagtcgcaatgcaagttcttcaagagtctttggataaagttcatagtgtag  19571900                                                       ---------->DOF2                                               ------->TEIL                              --------->At5g28300                                         <---------ARR11(3)                             ----------->GT1                                --------->HSFB2a(2)   <---------AHL20(2)  <---------AHL20(2)        < --ZAT14            --------->HSFB2a(2)  --------->ARR14(2)              <---------AHL20(2)      <--- ->ZAT14            <---------HSFB2a(2) <---------CCA1(2)   ---------->DOF2           --------->At4g35610 -ZAT6        <---------ZAT6    <---------HSFB2a(2)------->TEIL          --------->AHL20(2)     -----   aagaaaaacaagactagtgtttatagaagaatttctgaaactatatctgtatgtatataaagaaaaggagcttattttaatttttgtttgctgtaaaatt  19572000                                                                      --------->AHL20(2)                                                                      <---------AHL20(1)                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                               <------MYB83                                                               <------MYB46(1)                                                           <------NtERF2                                                           <---------At4g35610              <---------At4g35610                          --------->ZAT2            ---------->DOF2 <---------ARR11(3)   <-----------GT1                      --------->At4g35610     --------->YAB1 --------->ARR11(3)   --------->MYB52(1)            --------->ARR14(2)<---------AHL20(2) <---------ARR11(3) ---------CCA1(2)  --------->YAB1          --------->AHL20(1)  ----------->GT1  --------->WOX13(1) ------AHL20(2) ----------->GT1<---------TOE2(3)    <---------ARR14(2)--------->AHL20(1) --------->ARR11(3) ---->AHL20(2)--------->At4g35610         --------->YAB1   <---------ZAT2     <---------YAB1   ttatatcttgacatagagctgtaataacagattaatgaagccaaaaataatgcaaataggcagcttggtaaataaatttgatcattcaaaagttcttcaa  19572100                                                                                                    -                          <-----------GT1              <----------DOF2                          <----                    ----------->GT1          --------------->AGL15                  --------->YAB1  -                   --------->DAG2            ================================================MADS_MADS                  ---------->DOF2           <-----------------AGL1           --------->ZAT6     <----             <----------DOF2               <-----------GT1                   <---------------AGL15 --             ================================================MADS_MADS    ----------->HVH21  <-------             --------------->AGL15         <---------At5g28300          <---------At4g35610  <-------             <---------------AGL15        <-----------GT1          ------->TEIL  --------->MYB52(1)<-   acttaagttttttttctttaaaaagttataaccagtttcccattttacccctatgggcttttgagcatgtatgcatatgacactaatggtaatgggcttg  19572200  --------->ANAC46          -------->P -------->ANAC58           <-----------GT1 --MYB83                --------->GLK1(2) -------->ANAC58        --------->ARR11(3)                                                         <- --MYB46(1) --------->At4g35610                                                                    -- ------->ZAT18          <---------ARR11(3)                                                    <------MYB83 --ANAC58   <---------At4g35610                          *TSS        <------NtERF2            ------- --ANAC58 <---------HSFB2a(2)                ------------>CBF      <---------ANAC46           <------MYB46(1) --------ZAT18      --------->YAB1          ------>ZmHOX2a(1)     ---------->ID1             <-------   gtacacaaaatttcagaagaaataaaaatctaccagtttccctctccttcaatctcagagttgtttttggcgcaaaaattcagaaaatttcttagttggt  19572300       <---------GLK1(2)                                                        <---------At4g35610    ------>ZmHOX2a(1)     <----------DOF2                                       <---------ZAT2      -   --------->TOE2(3)<-----------HVH21                                           --------->ZAT2      < --------GLK1(1)--------->ARR14(2)                <---------YAB1                --------->At4g35610 - ------->GLK1(1)------->TEIL                  ------->TEIL                     ------->TEIL         < ---->GT1       <---------ARR14(2)  <---------ZAT18                          ------->GAMYB --------->TOE2(3) --MYB46(3)     --------->GLK1(2)   --------->ZAT14       <---------GLK1(2) --------->ANAC46       --   gaattcctaaattctctgaatctgtcatctttctctactgtgctcatgaattttgatatagattgtttgatttcttcaacgcagctacagtttccttcat  19572400                       <-----------HVH21                 <---------GLK1(1)                 --------->GLK1(1)             <---------MYB52(1)            --------->LBD16          <---------LBD16        --------->ARR14(2)        <---------ARR14(2)       <-----------GT1        --------->GLK1(2)   <---------GLK1(2) -------->ZAT2  <---------ARR11(3)                                                              <---- ---------At4g35610   --------->LBD16                                                           ----- -------->At4g35610 <---------LBD16                <---------MYB52(1)            --------->GLK1(2) ---------ZAT2  --------->ARR11(3)                --------->LBD16   --------->ZAT14         <-------- --------->RAV1(1)------>ZmHOX2a(2)             <---------LBD16     <---------ZAT14  <-----------GT1   ccagcagacgattccggtgatctccggtcagaatattacaaactattgattccggtgagtttatgaactgtatacttgaaacgattctaacaattcacga  19572500                 <-----------GT1              --------->ATHB51              <---------ICU4              <---------AHL20(2)                                                                    <          --------->AHL20(2)                                  --------->TOE1(3)             ------->TEIL     <---------ATHB12  --------->AHL20(2)                     --------->TOE2(3)             --------- -----GLK1(2)--------->ICU4                  <---------WOX13(1)                             <-------- ---->ARR14(2)--------->AHL20(2)           --------->ATHB12   <---------MYB59           <---------WOX13(1) ---GT1   <---------AHL20(2)              <---------YAB1   <-----------GT1            --------->ATHB12   ttctccaatcgtttaattatttcaatttcatacaatccgatgttttgattgcattcgaatttaacctaaatttgaatagtcttgtgtttgattgaatctg  19572600                               --------->GLK1(1)                             --------->LBD16                            --------->ANAC46                    <----------DOF2                    <---------DAG2                                            <-----------GT1              <---------GLK1(2)<---------GLK1(1)                             <-------TEIL ----------DOF2--------->GLK1(2)                                       ---------->DOF2 >ARR14(2)    <---------ARR14(2)                               --------->GLK1(1)  --------->YAB1 -ARR14(2)    --------->ARR14(2)--------->GLK1(2)         ----------->GT1  <---------GLK1(2)    <----   gtcttttagttttgaagaatcgctttttctccgaaatctgtgccaaaatttgagttcgtagagtgatttctactaaagattcactcatcgtcttgtttct  19572700                                <-----------------AGL2 --------->HSFB2a(2)       <---------ZAT14    <---------ARR14(2)           <---------HSFB2a(2)       --------->ZAT14    --------->ARR14(2)   ------->TEIL    ----------->GT1    <---------ANAC58   ----------->GT1                       ----------------->AGL1 ------DOF2            <---------ANAC58   <---------ANAC46                      <-----------------AG   ttgtaacagtgaaatgaagttcaaggcgtttctgactgaaaatggtgtgaatctcttagagaagaggtttcttccagcgtttgacaaaatggggaagaat  19572800  Previous    Next  AGI:  At1g52520.1    Description:  FRS6 (FAR1-related sequence 6); zinc ion binding. similar to FRS8 (FAR1-related sequence 8), zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G80010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62693.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62694.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75288.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1 (InterPro:IPR004330) Range:  from: 19569438    to: 19572053    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g52530.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN81953.1); contains InterPro domain Hus1-like protein (InterPro:IPR007150) Range:  from: 19572257    to: 19573727    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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