Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                   <---------AHL20(1)                                                                              <---------ATHB12 ----->YAB1                                                                <---------AHL20(2) ----->TOE2(3)         <-----------GT1  ------->TEIL                      <---------AHL20(2) ---CCA1(2)          <-----------GT1 <---------YAB1                       --------->AHL20(2) --GT1  --------->AHL20(2)    <---------TOE1(2)              <---------ICU4--------->AHL20(2)   cttatttcgataaattttggatttttcactcttgggtttatgaaacttcttctcaaattccaaatattactcaaaatttaatcaattttttttgcagaat  19421600                      --------->YAB1                      <---------ICU4<---------GLK1(2)---------->ID1                 ------------>CBF        <----------DOF2 <---------YAB1         --------->ATHB12             <------ZmHOX2a(1) <---------ANAC58    <---------ATHB12--------->GLK1(2)                    <---------TOE1(3) <---------ANAC58    --------->ICU4 <---------ARR14(2)   <----------DOF2  <---------TOE2(3)   ggtacttgggatttattgttttaatcatgaattcagacgattctgtttttgatttgtctcttttatgtttttcattaaggaagaaacacaatttgatttt  19421700                                                                                           <---------                                                                                           ----------                                                                                          <----------                                                                                          -----------                                                                                          -----------                                                                                          <----------                                                                                          <----------                                                                                          -----------                                                                                          <----------                                                                           --------->ZAT2 -----------                                                                           --------->At4g35610                                                                        ---------->DOF2   ===========                                                            --------->WOX13(1)            ===========                                 ------------>CBF           --------->YAB1 <---------At4g35610      <                                <<<<<<<<<<<<<<<<<LFY       --------->AHL20(2)       <---------ARR11(3)                  --------->At4g35610          <---------ANAC58 ---------->DOF2 --------->ZAT6<------  <---------ANAC46<---------At4g35610          <---------ANAC58--------->YAB1<---------ZAT18------>ZmHOX2a(1)   ggttctgtgtttttgtttagagcagacaaatagtttacaatggactcttgcttcagttccattaatcaaagccttacagctcacactatctttcctcttt  19421800       ------>ZmHOX2a(1) ------AGL15 ----->AGL15 -------AG ------>AGL3 ------>AGL1                                    <------------CBF -------AGL2                     <---------TOE2(3) -------AGL3                <---------------AGL15 ------>AGL2                --------------->AGL15         --------->ATHB51 -------AGL1               ----------------->AGL3         <---------AHL20(2)           <------ZmHOX2a(2) ------>AG          <------------CBF           --------->ICU4            <----------DOF2------>ZmHOX2a(2) ============================================MADS_MADS    <---------ICU4--------->TOE2(3)    <------- ===========================================MADS_MADS     --------->AHL20(2)          --------->ARR11(3) --------P        --------->ARR11(3) <-----------GT1     <---------AHL20(2)       ---------->DOF2 ----DOF2<----------DOF2   ----------------->AGL1        --------->ICU4 <---------DAG2<---------ARR11(3)   tggtaagtcctctttgtgaagttattgtttccattaatgttaccttgtcatattgagaaattatttctcagtaacctttttatcgaaagatcgttttcga  19421900                                 --------->ANAC58                                 --------->ANAC58                                         -----------                               <---------ANAC46                                      --------->ARR14(2)                          <------MYB46(1)                                         <---------ANAC46                          <------MYB83 --------->YAB1                           <---------ANAC46                         --------->MYB111(1)                                   <---------AtMYB61                    <---------MYB52(1)<-------TEIL--------->AtMYB61         <----------DOF2  <------- --HSFB2a(2)<---------WOX13(1)<------NtERF2    <-----------GT1         ------->TEIL  <---------ARR14(2)   agtctctatagttgattaatctgttatttggtggcaggcattcatgttttcaccatcacatttgctctctatggatgtcttttggtgtatatgtgactgg  19422000                                                                                      --------->TOE1(2)                                                                                    ------->TEIL                                                                                   ------>MYB46(1)                                                                                   --------->MYB52(1)                                                                                   ------>MYB83                                                 <---------MYB46(3)              <---------MYB59                                                <---------MYB52(1)              -------->ZAP1                           <----------DOF2     --------->At5g28300            <---------WRKY18(1)                 --------->ATHB12         ----------->HVH21                  --------->WRKY45                <-------TEIL          <---------CCA1(2)                      --------->WRKY12 >HVH21      <---------At4g35610  --------->ANAC55(2)                        ----------->HVH21   ---- --ANAC46    --------->At4g35610<-----------GT1<-------GAMYB                 --------->WRKY38(1) <---   tgttctgtttcagacagcttcatttgtgtcttttttacttatctctcacggttattgcatcacttgtgaacggctctcgttgaccgaacgtagaactaca  19422100                                                                                        -------------                                                                                      ------>MYB46(1)                                                                                      ------>MYB83                                                                                    <---------MYB111(1)               <----------DOF2                                                      <---------MYB46(2)           <---------ANAC46                         =================================================       <---------ANAC58                     --------->GLK1(2)                    <-----------GT1       <-------GAMYB                 <-------TEIL   --------->TOE2(3)       <----------DOF2         -       <---------ANAC58             --------->CCA1(2)                       <---------DAG2   -------- ----->At4g35610             <-----------RAV1(1)    --------------->AGL15  <---------DAG2<---------ICU4 ------At4g35610 <---------AHL20(2)<---------ARR14(2)------>ZmHOX2a(1)  <-----------GT1 <------------   gcttcacttggttgtgtcttttatttgactcttgttggatacagagcttctgttccttattttgcagtgagtttttacctttttcacctactcattaaag  19422200                                                              <---------YAB1                                                          <---------ANAC58                                                          <---------ANAC58                                                         <-------TEIL                                                       <-------PIF5   <----------DOF2                  <---------ATHB12   ------->PIF5--------->ANAC55(2) -->AGL15                          ------>MYB46(1)    <---------ZAT2<---------MYB59 ===MADS_MADS                      ------>MYB83     <-----------RAV1(2)          ------>ZmHOX2a(2) -------->GLK1(2)               --------->MYB46(3)------>ZmHOX2a(1)<---------ANAC55(2) -->DOF2                       ------->TEIL <-----------GT1 <---------At4g35610<---------ARR11(3) ---AGL15               <---------YAB1<----------DOF2 <---------At4g35610      --------->ARR11(3)   ctaatcttttacttacttacaagatgatgaatgaaccaatctttttttgctcctccaggtgcttctgatacttaactacatgatctcattctatgttata  19422300                                      ----------->RAV1(2)                               --------->HSFB2a(2)                               <---------HSFB2a(2)                    --------->MYB52(1)<---------ZAT2                       <---------AtLEC2                <---------ARR11(3)    --------->ZAT2                   --------->CCA1(2)                --------->ARR11(3)    <---------At4g35610           --------->ANAC46             <---                --------->GLK1(2)     --------->At4g35610           --------->ANAC58      -----------          ----------->GT1     <---------ANAC46                      --------->ANAC58  <---------ARR14(2)     --------->ANAC55(2)      <---------ANAC55(2)             --------->KAN4(1)       --------->ARR14(2)     <---------ANAC55(2) --------->ALFIN1                    <---------KAN4(2)     <---------ANAC46   ttccatcacatatcgcaaaatctagcggtgttacgagaacagctgagttttatcgaagatgagaatgttcaagctatgcatgatgctgtatatgctaaat  19422400                                                                                                <----                                                                                                -----                                          <---------MYB46(3)                               <---------HSFB2a(2)                                         <--------P                                  <---------TOE1(3)                  <-----------GT1       <-------GAMYB                          <---------YAB1   -----        <---------------AtSPL8         <---------MYB46(3)                <---------AHL20(2)--------->HSFB2a(2) ----TEIL   <-------TEIL     <-----------RAV1(2)             --------->At4g35610     <---------TOE2(3) >GT1   <---------------AtSPL3        <---------YAB1     --------->GLK1(2)    <---------TOE2(3) <----   acatcatgttcaagtacgtttttcattaccctcaggtttgatggttgatggaagtagataatctgctaagagtttttatttatgtttatggtttcagaaa  19422500  Previous    Next  AGI:  At1g52155.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO45853.1) Range:  from: 19421975    to: 19423522    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version