Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------AHL20(2)                      ----------->GT1                               --------->AHL20(2)                  <-----------GT1                             <-----------GT1           <---------MYB52(1)             --------->ATHB12                             --------->ARR11(3)      --------->RVE1(1)      --------->ARR11(3)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->MYB52(1) -YAB1<---------ARR11(3)               <---------ANAC46   <---------ARR11(3)   xxxxxxxxxxxxxxxxxxxxxx --AtSPL8   <---------YAB1            <---------AtMYB61 <---------TOE2(3)  ----------->GT1 --AtSPL3<---------AHL20(2)     <---------TOE2(3)--------->YAB1 <---------YAB1<xxxxxxxxxxxxxxxxxxxxxx   agagtttagattttatgattaaacgagttaaatataggtttaggtgtataaacatatttagattttacaattaaacgaggttaaatatcggtttgggttt  19334200                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                 <---------MYB46(3)                                                <---------DEAR3(1)                                                <---------ANAC46           <---------TOE2(3)                  ------------>AtMYB77                    ----------->GT1           <---------TOE1(3)    <---------AHL20(2)<-------GAMYB                   <---------GLK1(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------RAP2.6(2)               --------->ARR11(3)     <---------YAB1            --------->AHL20(2)<---------DEAR3(2)       <---------TOE2(3) --------- >smallRNA(se3)            <---------YAB1<---------AHL20(2)               <---------TOE1(3) <-------- xsmallRNA(se3)          <-----------GT1 --------->AHL20(2)    ---------->DOF2  ----------->ARR10   aaaaaatacgattagggtttagtttttttacgattaaatgagtttaaatggcggtttgagtttacaaaagagaattagggtttagattttgtaattaaac  19334300                                --------->AHL20(2)                                <---------AHL20(2)                               --------->YAB1                           <---------YAB1                          --------->AHL20(1)                          <---------AHL20(1)                          --------->AHL20(2)                          <---------AHL20(2)                         <---------ICU4                         --------->YAB1           --------->AHL20(2)                        --------->ICU4            <---------AHL20(2)                        <---------YAB1       <---------AHL20(2)                      --------->YAB1 <---------AHL20(2)                           xxxxxxxxxxxxxxxxxxx                      <---------ICU4 <---------AHL20(1)                          <---------MYB46(3)                     --------->ICU4  --------->AHL20(1)                       <------------CBF                     <---------YAB1  --------->AHL20(2)   <---------ARR14(2) --------->ATHB12                    <---------AHL20(2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)----------->GT1                    <---------AHL20(1)     ----------->GT1--------->ARR14(2)<---------AHL20(2)  --------->AHL20(2)--------->AHL20(1)     --------->ANAC55(2)              <---------YAB1 >AHL20(2)          --------->AHL20(2)     <---------ANAC55(2)    ----------->HVH21 >>>>>>>>>GT-1---- -AHL20(2)         --------->YAB1<---------AHL20(2)      <------ZmHOX2a(1) <-----------TBP ----------   gagattatatatcagtttgaattataattataattttaatttattatgtaatttaaataggatttgatatgacatgtttttattggttaatacaaaagaa  19334400                                                                   <---------REM1(1)                                                                 <------MYB83                                                                 <------MYB46(1)                    <                                                                <---------AtMYB61                  --                                                         --------->ALFIN1                          --                                                  --------->CCA1(2)<---------ANAC46               <--    <---------AHL20(2)                       ---------->DOF2    <---------MYB46(3)                ---    --------->AHL20(2)      ------->TEIL   <---------HSFB2a(2) <--------P                       ----- xxxx>smallRNA(s2) --------->HSFB2a(2)     --------->HSFB2a(2)<-------GAMYB  --------->YAB1     <---- ------->GT1       <---------HSFB2a(2)<---------ANAC58 <---------bZIP60(2) <-----------TBP      <---- >DOF2          <---------------AGL15 <---------ANAC58 <---------ANAC46   <----------DOF2       -----   ggtgaataaaatggtttacccctagaagtgaatctaaatttcgttctaaaagaaatgaggtgggagttggtgtagacttttataaacatctaataccctg  19334500    <---------MYB52(1)   <-------GAMYB  <---------MYB46(3) ------NtERF2 ---->NtERF2 --------->DEAR3(1)   --------->ANAC46 ---------->AtMYB77            --------->ZAT14                                 ------------>CBF -------ATERF1(2)              <---------ZAT18                         <---------ALFIN1 ------>ATERF1(2)              --------->ZAT18                    --------->ZAT6 --------->WOX13(1) ---->At4g35610          <-------GAMYB            <---------AHL20(2)--------->ANAC46 -----At4g35610         <---------MYB46(3) <---------ICU4         <---------ALFIN1 <---------ATHB12 -----ZAT2--------->ANAC58     <---------ZAT14  --------->ANAC55(2) --------->ANAC58             ---- ---->ZAT2--------->ANAC58<---------MYB52(1)    <---------ANAC55(2) --------->ANAC58--------->YAB1   ctggcagttagtaagccccccataggctgttagtacacttcaaaaacattacttaatttcattttccaacactccacattttgcaatcacattattcaac  19334600                                         <------ZmHOX2a(2)  ----------->GT1                                        --------->ARR11(3)--------->CCA1(2)                                        ------------------------>ANAC81               <---------YAB1          <------ZmHOX2a(1) --------->ARR14(2)           <---------ANAC55(2)    <---------HSFB2a(2)    <---------ARR11(3)         <------NtERF2      --------->YAB1              --------->HSFB2a(2)    --------->ARR11(3)         ------>NtERF2   -      ----------->GT1             <---------ANAC46       --------->ARR11(1)        --------->ZAT18 <-      <---------ICU4             <---------LBD16         <---------ARR14(2)       <---------ANAC58 <- ------------>CBF <---------GLK1(1)--------->LBD16     ----------->ARR10--------->AtLEC2        ----- --->GAMYB<-------TEIL          --------->MYB52(1) >>>>>>>>>TBF1   <-----------GT1<---------ANAC58---   cgaaacaatagttacatatgatttctctacaaacttccggaggatcaagcgaagaagaagatatgttattagccatacaactaggcgggctaaactttgt  19334700      ----------->GT1  <-------TEIL                                                                        --------->ARR14(2)  --------->SPL7                                                                      <---------ARR14(2) -------->LBD16                                                       ------>ZmHOX2a(1) --------ANAC55(2)                       --------->ICU4               <---------CCA1(2)     <-------- --------ANAC46                          --------->GLK1(2)  <----------DOF2       <---------MYB52(1) ----->ID1                           --------->HSFB2a(2) <---------ARR11(3) ----------->HVH21   <---- ------------>AtSPL3         <---------GLK1(2)          <---------ALFIN1<---------CCA1(2)   <--------   cccgtacattgtaaaaactgctagagaactagatttgttcgagattatggctaaggccagacctttagggtcctatctctcaccggtggatttggcttcc  19334800                                                                             ------->PIF5                                                                             <-------PIF5                                                                             <-------MYC4       --------->DEAR3(1)                                                    ------->MYC4       --------->RAP2.3(3)                                                   <-------PIF4       ----------->GT1                                                       ------->PIF4      --------->RAP2.3(1)                                                    ------->MYC2      <------NtERF2                                                          <-------MYC3     ------>NtERF2                                                           ------->MYC3    <---------DEAR3(1)                                                     ------->TEIL   <------NtERF2                                                           ------------>OsbHLH66   --------->ATERF1(1)                                                   <---------ZAT14   <---------ABI4(2)                                                <---------ANAC58  <---------RAP2.3(1)           --------->ATHB12                    <---------ANAC58  <---------ATERF1(1)          <---------YAB1                       <---------ANAC46  <---------RRTF1(1)           --------->ICU4                   --------->ARR14(2)  <---------ERF1             --------->YAB1                     --------->KAN4(2) <---------RRTF1(3)          <---------ICU4                     <---------ARR14(2) <---------DEAR3(1)         <---------ATHB12                   --------->KAN4(1) <---------RAP2.3(3)        --------->ICU4                     <----------TaMYB80     <------MYB46(1) <---------RAP2.3(2)--------->ANAC58                  <---------ANAC58   --------->ZAT18 -ANAC58            --------->ANAC58      <---------WOX13(1)  ---------->TaMYB80      <------MYB83 -----AtLEC2        --------->ANAC46  <---------WOX13(1)     <---------ANAC46<-------MYC2 -ANAC58          <---------ALFIN1<---------WOX13(1)  <---------ANAC58   <---------ZAT18  ---------->DOF2   atggctgcgccgaaaaatccacacgctccaatgatgattgatagattgctacgtttccttgtggcatattcggtgtgcacgtgtaagttggtgaaagatg  19334900                                                                                            <--------                                                                               ------>NtERF2---------                                                                               --------->ZAT18                                                                               <---------ZAT18                                ---------->DOF2                     --------->GLK1(1)       ---------                              <------ZmHOX2a(1)                    <---------ARR14(2)       ---------                      --------->ANAC55(2)                          --------->ARR14(2)       <--------                     <-----------------AG                          <---------GLK1(2)        <--------          --------->GLK1(2) --------->MYB59           <---------TOE2(3)       <---------ANAC58   <------ZmHOX2a(1)--------->MYB52(1)  ---------->DOF2 <------ZmHOX2a(1)     <---------RAP2.6(2)  <----------ID1   <---------SPL7--------->DAG2       <---------TOE1(3)       <---------ANAC58   aagaaggacgagagtctagagcatacggattaggaaaagttggaaagaagttgattaaggatgaagacggattttcaattgcgccctatgtgctagctgg  19335000                  --------->ALFIN1                <------MYB83                <------MYB46(1)    ---------->DOF2 -STY1(2)       <---------ANAC46                                                              ------- >ZAT2--------->ANAC58                                                                    --------->AHL20(2) >STY1(2) --------->MYB52(1) <---------------AtSPL8                     --------->ANAC55(2)   <------ >At4g35610    <---------DEAR3(1)                                       <---------ANAC55(2)<---------AHL20(2) -At4g35610    <---------AtMYB61                                        ----------->GT1   <---------AHL20(2) -ZAT2--------->ANAC58 ----------->GT1                     <----------DOF2    --------->TOE2(3)   ctgtacaaaagccaagggaggtgtatggtataatgtacaacatgttccaaataggtgttctcttttgttttggtatgtaacataaatgtttattaatttg  19335100  Previous    Next  AGI:  At1g51990.1    Description:  O-methyltransferase family 2 protein. similar to ATOMT1 (O-METHYLTRANSFERASE 1) [Arabidopsis thaliana] (TAIR:AT5G54160.1); similar to Caffeic acid 3-O-methyltransferase 1 (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-1) (CAOMT-1) (GB:Q9XGW0); contains InterPro domain O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); contains InterPro domain Plant methyltransferase dimerisation; (InterPro:IPR012967); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain O-methyltransferase, family 2; (InterPro:IPR001077) Range:  from: 19334618    to: 19336336    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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