Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <----------DOF2   --------->TOE1(3)                                                      --------->TOE2(3)            --------->YAB1              <---------AHL20(2)                    <---------TOE2(3) <----------DOF2 ------->ANAC46                                     <---------YAB1    <---------DAG2 ------->ANAC58             <---------ICU4         <-----------GT1 <-----------GT1 --------->TOE2(3) ------->ANAC58    <-----------GT1       <----------ID1   <---------TOE2(3) ---------->ID1     <-----   caagaaaccacatgatataattttcgctactaatgtctaaattaagacaaaattaacattaagaaaactttactttttgtcttaatcttaaacaaattca  18941400                              --------->ARR11(3)                              <-----------ARR10                             <---------CCA1(2)                     <-----------RAV1(1)                      --------->TOE1(2)                         --------->GLK1(2)                      --------->ARR14(2)                  --------->MYB52(1) <---------ICU4                      <---------ARR14(2)                 ----------->HVH21   --------->YAB1                   --------->AHL20(2)                 --------------->AGL15 --------->ICU4<----------               ---------->DOF2<---------ARR11(3)    -------->P <---------GLK1(2)<-----------GT1            --------->HSFB2a(2)          ---------->DOF2<---------MYB52(2)  --------->AHL20(2) ------GT1  <---------HSFB2a(2)     <---------MYB52(2)--------->ZAT6    <------NtERF2----------->GT1   ctgaatatttctttctacaaagaaaatacgaatatctcactaacaaaggaaacttaccactaacagcttctggtggcattaattactctgtaaattgcca  18941500                                                                                         --------->YAB1                                                                                  ------->GAMYB                                                                                ------>MYB83                                                                <------------CBF------>MYB46(1)                                                               --------->ATHB12--------->MYB52(1)                                                        ---------->DOF2        ----------->RAV1(1)    <---------At5g28300                               <---------HSFB2a(2)     --------->AtMYB61 --CBF            ----------->GT1           ----------->GT1   <-------TEIL   --------->MYB46(3)    <-   ttttttcaccgagagaaaactagaaaaacaaaacaaaacatggaaactgtaacattctaaaagattcattgttaacaaaaccaacagagaaacataatac  18941600            <-----------GT1         <---------ARR14(2)         --------->ARR14(2)                                                 <---------ANAC58        <------ZmHOX2a(1)                                                   <---------ANAC58      --------->LBD16               --------->ARR14(2)               <---------ANAC58     <---------HSFB2a(2)            <---------ARR14(2)               <---------ANAC58     <---------LBD16   <-----------ARR10                             <---------ANAC46<---------ARR11(3)     --------->HSFB2a(2)       ------>ZmHOX2a(1)         <------------------------ANAC81            - --------GLK1(2)      <---------CCA1(2)       ------>ZmHOX2a(1)    <---------YAB1    --------->ARR11(3)   tgattttccaggatttactccctcaaatctctccttcaaatactcttcctaatctcttctgttttcattttgcttgttccctgcgaacatctctctctct  18941700                      <----------DOF2                      ------>ZmHOX2a(1)               --------->CCA1(2)                ----------->RAV1(1)               <------------------------ANAC81       --------->ARR14(2)                ------->GAMYB       <---------ANAC58                              <---------ARR14(2)             --------->MYB52(1)       <---------ANAC58   <---------ANAC58        <---------TOE1(3)             --------->ANAC58       <---------ANAC46   <---------ANAC58        <---------TOE2(3)             --------->ANAC58 ----->ZmHOX2a(1)  ---------->ID1        <---------AHL20(2)<---------------------WRI1 --------->MYB46(3)   tcctctgtttcttgtttttttgtccttttcttgatttttgtatttttttgttatggatatggacgagatgagcaatgtagccaagacaacgacagagact  18941800                                                                          <---------ANAC58                                                                --------->ANAC46                                     --------->ANAC58         ----------->RAV1(1)                                     --------->ANAC58         --------->AtMYB61                            --------->ANAC58               --------->AtMYB61                            --------->ANAC58 ------>MYB83 --------->MYB46(3)                 <---------ANAC58--------->ANAC58   <---------ARR14(2)    <---------ANAC58                 <---------ANAC58--------->ANAC58   --------->ARR14(2)  ------>MYB46(1)         -----        ------->GAMYB       --------->ANAC55(2)  <---------TOE2(3)      ------>MYB83 --------->ANAC46     --------->MYB52(1)     --------->ANAC46 ------>MYB46(1)----------->RAV1(1)  ----------->RAV1(1)   tcaggcttaactgactctgtcttgagcctcacgaaacgcatgaaacctactgaggttacgaccaccacaaaacctgccttgtccaacacgacgaaattca  18941900                                --------->ZAT18                                <---------ZAT14                                <---------At4g35610                                --------->At4g35610                                               ---                       --------->ATHB12                          <---------ANAC58                 <--                     <-----------HVH21 --------->CCA1(2)         <---------ANAC58              ------                 --------->MYB52(1)   --------->ARR14(2)   <---------ARR14(2)                  <-----               ------->GAMYB <---------ANAC46             <------ZmHOX2a(1)        --------->At4g35610          --------->At4g35610<---------ANAC58           <---------TOE2(2)      --------->ARR14(2) <--          <---------At4g35610<---------ANAC58 --------->DEAR3(1) <---------ANAC46  <---------At4g35610    <---------MYB46(3) <---------MYB46(3)  --------->ANAC46--------->ARR14(2)  <---------ARR14(2) --- ----->DOF2 ----------->RAV1(1)--------->ALFIN1         <---------TOE1(2)<----------DOF2 ---------->DOF2   aaggagttgttcagcaacagaacggtcattggggtgctcagatttacgcagaccatcgaaggatttggcttggaactttcaaatccgctcatgaagccgc  18942000                                                         <---------HSFB2a(1)                                                         --------->HSFB2a(1)                                                        <---------HSFB2a(1)                                                        --------->HSFB2a(1)                                                        <---------HSFC1(2)                                                        --------->HSFC1(2)      <---------YAB1                                   --------->ARR14(2)  <---------ANAC58                                     <-----------ARR10  <---------ANAC58                                     <---------ARR14(2) --------->At4g35610                                 --------->LBD16 <---------At4g35610                           --------->ANAC58 ------>ZAT2                                   --------->ANAC58 -------ZAT2                                >>>>>>>>>AtCCA1                                   <------ --->At4g35610                              >>>>>>>>>AtLHY     <---------MYB52(1)      ------->TEIL ----At4g35610                    <----------DOF2<---------ALFIN1              --------->ANAC46 -------At4g35610               --------->HSFC1(2) <---------LBD16          <---------At5g28300 ------>At4g35610               <---------HSFC1(2)--------->MYB52(1)       <-----------GT1--------->LBD16   tgctgcttacgatagcgcatcgattaagcttcgaagctttgatgctaactcgcaccggaacttcccttggtctgattttaccctccatgaaccggacttt  18942100                      --------->ALFIN1                  --------->At4g35610                                         --------->ARR14(2)                  --------->ZAT2                                              --------->GLK1(2)                 --------->GLK1(2)                                            <---------ARR14(2)           ----------->RAV1(1)                                               <---------GLK1(2)   <---          --------->ANAC58                                         --------->ARR11(3)            <---          --------->ANAC46                                         <---------ARR11(3)            <---        --------->REM1(1)                 --------->HSFC1(2)       <---------GLK1(2)        <-------- ----DOF2 --------->ANAC58                <---------HSFC1(2)      <---------RVE1(1)       <---------GLK1(2)   caagagtgctacacgacagaagctgtgttgaacatgatcagagacggttcttatcaacacaagttcagagattttctcagaatccggtctcagattgttg  18942200                                                                                    <---------DAG2                                                                                    <----------DOF2                                                                                  <---------ZAT2                                                                                  <---------At4g35610                                                 --------->WRKY18(1)             ------->TEIL                                               <---------MYB46(3)             --------->ANAC46                                              --------->ALFIN1                --------->ANAC58                                           --------->DAG2                     --------->ANAC58                 =======================HOX2a_HOX2a                        --------->ZAT18                 <------ZmHOX2a(2)     <------ZmHOX2a(1)                   <---------ZAT18 ------ANAC58    =============================HOX2a_HOX2a                  --------->ZAT14 ------ANAC46    ==========================HOX2a_HOX2a                  <---------ANAC46 ------ANAC58<---------TOE1(2)      <------ZmHOX2a(1)                   <---------ANAC58           -- -MYB46(3) --------->TOE1(2)     <------ZmHOX2a(1)     --------->GLK1(2)<---------ANAC58    ---------   cgaatatcaacatcgtgggatcaaaacaagtcttaggaggaggagaaggtggtcaagaatcgaacaagtgtttctcgtgcacgcagctttttcagaaaga  18942300  Previous    Next  AGI:  At1g51110.1    Description:  plastid-lipid associated protein PAP / fibrillin family protein. Identical to Probable plastid-lipid-associated protein 12, chloroplast precursor (PAP12) [Arabidopsis Thaliana] (GB:Q8LAP6;GB:Q9C686;GB:Q9C687); similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22009.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 18938997    to: 18941333    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g51120.1    Description:  AP2 domain-containing transcription factor, putative. Identical to RAV1-like ethylene-responsive transcription factor At1g51120 [Arabidopsis Thaliana] (GB:Q9C688); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G50680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66691.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 18941759    to: 18942817    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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