Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ARR11(3)                     <---------ARR11(1)                     --------->ARR14(2)                    <---------CCA1(2)                    ------>MYB46(1)                    <---------ARR14(1)            --------->ZAT6      <-------TEIL  ------>MYB83   --------->HSFB2a(1)   <---------At4g35610   --------->At4g35610   --------->HSFC1(2)<---------ARR11(3) <-------MYC2                  <---------ANAC55(2)     -------   <---------ZAT2 <---------MYB111(1)   ------->MYC2             --------->YAB1             <--------   <---------HSFC1(2)<---------ARR14(2) <-------MYC3            <-------TEIL            --------->YAB1   <---------HSFB2a(1)                  ------->MYC3          <---------GLK1(2)    --------->MYB46(3)   --------->ZAT2 <---------MYB59     ---------->TaMYB80 <-----------GT1      --------->TOE2(3)   aagggagcttcgtttcactaccaaatcttcaagacttgggcatatgcttagaagcgttttcacagattcatcacttgaaaacttaaccaatattaagtgg  18927200                             --------->ALFIN1                            <-------MYC2                            ------->MYC3                            <-------PIF5                            ------->MYC2                            ------->PIF5                            <-------MYC3                           <---------ANAC55(2)                           <---------ANAC46                           <---------bZIP60(2)                           <---------O2                           --------->O2                           =========================================bZIP_DOF                           <---------TGA1a                           --------->TGA1a   --------->TOE2(3)                     ------->TEIL      ------>ZmHOX2a(1)                  <---------MYB52(2)  --------->TOE2(3)         --------->ZAT6             =================================HOX2a_HOX2a     <-----------GT1 -->ALFIN1   <------ZmHOX2a(2)    --------->HSFB2a(1)         --------->MYB52(1)         ---------->DOF2 -ANAC46   --------->At4g35610    <---------HSFB2a(1)    ---------->DOF2   ----------->GT1        ---   agacgtttgagacagatcaaacgaacatcacgtggaacatccttcaaacttagtttctctaaagtaacagtatcaagttgtgaaaacatgtaaaagctat  18927300                                                    --------->ANAC58                                                    --------->ANAC58                                                --------->ARR11(3)                                                <---------ARR11(3)                                            ---------->DOF2    ----------->GT1                   <-----------GT1  --------->At4g35610   ------->GAMYB  <---------TOE2(3)         <---------TOE1(2)          <---------At4g35610 --------->At4g35610 ------>MYB59  --------->AHL20(2) <-----------GT1<------ZmHOX2a(2) --------->WOX13(1)   taggcaaatcgaaggaattaaaaaccatctcgatttttagctctctcaaagatcgagcaactgcgatgttaatcaaaggtttgatgtctctacttggaca  18927400                  <---------AtLEC2              --------->AHL20(1)                 <-------TEIL                   <---------AHL20(1)              <---------At4g35610               --------->AHL20(2)                               ----              <---------ZAT2                    <---------AHL20(2)                               ----              --------->ZAT2          <----------DOF2        <----------DOF2                ---------              --------->At4g35610 <------MYB83 --------->AHL20(2)                     <-----------GT1  <------ZmHOX2a(1)               <------MYB46(1)    --------->ZAT18               --------->ARR14(2)   aggaggagtcatcttgagctgcatggtctcaacgcttggtcttttgctaataaattgcacaaactttcagtaagttctacctatggattcaccatcatac  18927500                                                                      --------------->AGL15                                                                     <---------ANAC58                              --------->DEAR3(1)                     <---------ANAC46               ==================HOX2a_HOX2a                         <---------ANAC58           <---------ALFIN1------>ZmHOX2a(2)                     <----------DOF2 <---------TOE2(3) ---------->DOF2         --------->ANAC58     <---------ICU4 ----->TOE2(3) ===================HOX2a_HOX2a                   <-----------------AGL3 ----->TOE1(3) ------>ZmHOX2a(1)           --------->ANAC46   <---------ARR11(3)                ----- >YAB1 <-----------GT1    <------ZmHOX2a(2)--------->ANAC58<---------ALFIN1         ----------->GT1   cttaatgttttcccctccttccaaagagatcgccatcgttttgacaagacacttgtgactaccacatctttacttggaagggaagaaagtatattcaata  18927600                                  *TSS                                  <-----------GT1                               <---------ICU4                               <--------HAHB4                     --------->DAG2                               --------->ATHB51               --------->ANAC58                     <---------WOX13(1)               ---------->DOF2                   --------->ATHB12       ----------->GT1  --------->ZAT18                        <--     --------->At4g35610       --------->YAB1    ----------->GT1 ---------->DOF2  <---------AHL20(2)     <---------At4g35610      --------->ICU4    --------->DAG2--------->ANAC58    --------->AHL20(2) ---->YAB1---------->DOF2     <---------YAB1   ---------->DOF2--------->ANAC46   --------->AHL20(2)   acaattcatctgaaaagtcactgattgaagccataattacaaatcggtgaaaagtgaaaagttcacgaaaagtactcactagatttatttagaaatctat  18927700                                                                      --------->MYB46(3)                                                                    <-----------GT1                                                           --------->ATHB51                                                           <---------ICU4                                                           <--------ATHB1------>MYB46(1)                                                           -------->HAHB4------>MYB83                                                          --------->AHL20(2)                                                          <---------ATHB51 --------->YAB1          <-                                        <---------YAB1    <---------ATHB12<---------ATHB12         --      ---------->ID1      <-----------GT1                 <---------AHL20(2)           <---------YAB1 -------AHL20(2)    <----------DOF2  ------>ZmHOX2a(1)    --------->ICU4--------->WOX13(1)      -----   ttttttttgtccctaagtgtttcttttgttacaaacctccttatgagaaaattttggcaaataattgttttaaccaatcagaaaataccattatacaaaa  18927800                                                                        <---------MYB46(3)                                                                        <------MYB83                                                                        <------MYB46(1)                                  <---------GLK1(1)                 <-----------RAV1(1)                                  --------->GLK1(1)                <---------YAB1                                  --------->CCA1(2)              --------->ATHB51                      <---------AHL20(2)                         <---------ICU4                      --------->AHL20(2)    --------->DAG2       -------->ATHB1         --------->AHL20(2)      <---------ARR11(3)              --------->ATHB12      --------->WOX13(1)         <---------ARR14(2)             <---------YAB1  <-----------GT1   <----------DOF2--------->MYB52(1)           <---------AHL20(2) --------ICU4       ------>ZmHOX2a(1)      ---------->DOF2      --------->AHL20(1) ------->YAB1      --------->TOE2(3)--------->RAP2.6(3)         <---------ATHB51      --------->YAB1 ---->YAB1  --------->TOE2(3)    --------->ARR11(3)             --------->ICU4<----------DOF2--------   ataatcaccaattacattaatcctttaatttcgaagatatcggcaaaaagttggaagcgagagaaaattattgttggtttctttgcaaatataacatgca  18927900                                                        --------->MYB59                                                  <---------------AGL15                                                  --------------->AGL15                                               --------->YAB1                                              <---------ATHB12                                 ------                                             ------>MYB83<------MYB83                          ------                                             ------>MYB46(1)                                   ------                                            --------->WOX13(1)                               <-------   <---------HSFB2a(2)                     --------->AtMYB61    <---------At5g28300        <---------  <xxxxxxxxxxxxxxxxsmallRNA(i)             --------->MYB46(3)  <-----------GT1          <-----------GT1 ->AtLEC2               ----------->GT1--------->MYB46(3)<------MYB46(1)    <----------DOF2<---------DAG2   caaatcgagaaatagtccaaatgttttagtaaaaaaaaaaaaccaccaatcacaatatttggtatttaccattcaactctttttgttttgttactttacg  18928000                              --------->AHL20(1)                              <---------AHL20(1)                              <---------ARR11(3)                            <---------AHL20(1)                                 --------->ARR11(3)                            <---------ARR11(3)                                 <---------ARR11(3)                       ------>ZmHOX2a(1)                                 --------->ANAC55(2)                  --------->KAN4(2)                                      --------->ANAC46     --------->YAB1   --------->TOE2(3)   --------->YAB1        <---------MYB52(1) --->ANAC58      <---------ICU4          <---------YAB1        --------->At5g28300 --->ANAC58      <---------KAN4(1)     --------->YAB1      ------------>MYB.PH3(1)                <-- --->ANAC46      --------->KAN4(1)<---------YAB1       --------->AHL20(2)--------->ANAC58         --- ----GT1        <---------YAB1--------->ARR11(3)      --------->AHL20(2) --------->ANAC58     ------- -DOF2       <---------YAB1 --------->AHL20(1)    --------->AHL20(2)<----------DOF2       -----------   ccctcaactataaatacgattattcctcaaaatattttcatttatcatataagaaaataaaaaaccgtgactttcaagtaatatctcaaatattgttaaa  18928100  Previous    Next  AGI:  At1g51050.1    Description:  pseudogene, hypothetical protein Range:  from: 18927023    to: 18927634    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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