Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->ALFIN1                                                   ------->MYC2                                                   ------->MYC3                                                   <-------MYC3                       --------->TOE2(3)           <-------MYC2                       --------->TOE1(3)          --------->ALFIN1                     <---------TOE2(3)         <------NtERF2                    --------->YAB1            ------>NtERF2                    --------->MYB52(1)        --------->LBD16              --------->ANAC58               <---------LBD16                 <---------ZAT2              --------->ANAC58               --------->LBD16                 <---------At4g35610         ---------->DOF2                     --------->ANAC46      --------->ANAC55(2)       <------ZmHOX2a(2)                    <---------LBD16        <---------ANAC55(2)             <-     ------->GAMYB --------->ICU4        <---------ARR14(2)       <-------TEIL            <---------YAB1    --------->MYB46(3)<----------ID1     --------->ARR14(2)--------->TOE1(2) --------->At4g35610  <--   ggaacaacgatcaaagaagcaataacgataaacaagtgcttcgaatcccggcatgtgggaacatgtgatacatattgtcagcttctaatatcaagattgc  18279700                                                   <----------DOF2                                                ------>MYB46(1)                                                ------>MYB83                                              --------->DEAR3(1)                                             --------->DEAR3(2)                     --------->At5g28300   ----------->RAV1(1)                       --------->MYB46(3)                <------ZmHOX2a(2)  <---------ETT(1)                         --------->MYB52(1)          --------->ZAT18  <----------ID1                           <-----------GT1             <---------ZAT18  --------->TOE1(2) --------MYB52(1)              ---------->DOF2------->GAMYB       <----------DOF2  ----------->GT1 -----GAMYB            ------->TEIL     --------->YAB1    --------->HSFB2a(2) <---------AGP1  -------   cgttgcgacaaaatacaactcgatgtatatgaagaaagagactaataaccgacctttcttcccaaacgctttgttcgctagatcagggtaactacgaacc  18279800                                                                                                 ----                                      <---------SPL7            ----------->GT1                 <----                                      --------->ZAT14      --------->YAB1                     <------                                     --------->ALFIN1   --------->WOX13(1)              <------------                                --------->MYB52(1)   --------------->AGL15              -------------                           --------->ANAC58          ================================================                           --------->ANAC58          <---------------AGL15              <---------ALFIN1                       <---------HSFB2a(2)     ----------->GT1---------->DOF2          <------------- >TEIL      <---------TOE2(3)  --------->MYB52(1)   --------->REM1(1)                  <-------------   atagggtcgagtttgaggcaacgttggagaagcaaaccggtgtaccaagttgttacaccaattagaaagaaaaacagaatgctaatccatccacttgagg  18279900                                --------->MYB52(1)                                ------>MYB83                                ------>MYB46(1)                               --------->MYB55(1)                               ----------->HVH21                              <---------MYB111(2)                              <---------MYB46(2)       --------->ANAC58       <---------MYB111(1)  --------->ZAT18             <---------MYB59  <-------TEIL                <---------MYB52(2) ------>DOF2                 <---------ANAC55(2) --ZmHOX2a(1)                --------->ANAC46 ---TOE2(3)                  --------->ANAC58 ---AGL15                    --------->ANAC55(2) -->AGL15                    --------->ANAC58 ===MADS_MADS      <---------KAN4(1)      <-----------GT1 ----AG--------->ANAC58      --------->ANAC55(1)         --------->WOX13(1)             --------->ZAT6 ----AGL1<------ZmHOX2a(1) <---------ALFIN1     --------->YAB1               <-----------GT1 <-------   aaagtgcataaggaatagccaatattccaacacctaacacatatataccatcaaaatagcaatctattagtttttcttataacaaaactaatactaaggc  18280000          <---------YAB1        --------->YAB1       <---------ZAT6   <---------ANAC58                                                                          --------   <---------YAB1                                              <<<<<<<GRF7                   <-------   <---------ANAC58  ----------->GT1                ----------->GT1                       <---------ANAC46   <---------ANAC55(1)                     ------->TEIL  <-----------GT1                  <---------ANAC58 <-----------GT1   <---------ZAT14        <---------CCA1(2)  ----------->HVH21--------->ALFIN1 --TOE2(3)--------->ICU4         ------->TEIL     ---------->DOF2---------->DOF2          <---------ANAC58   taattacgagtgataatcgactatagttatatatgaaactatatgtatcttagaaagttatacctgacaaagaattcaatgtgttgaaacaagcgtgaac  18280100                                  --------->HSFB2a(1)                                  <---------HSFB2a(1)                                  <---------HSFC1(2)                               <------NtERF2                              --------->LBD16                             --------->LBD16                             --------->RAP2.6(2)                             --------->RAP2.3(2)                            <------NtERF2                            <---------LBD16                            --------->ATERF1(1)                            --------->RAP2.3(1)                           ------>NtERF2                           <---------ATERF1(1)                          <---------ATERF1(2)                          --------->DEAR3(1)                          --------->ATERF1(2)                         <---------RAP2.6(2)   --------->GLK1(1)     --------->RAP2.3(1)   <---------GLK1(1)    <---------ATERF1(1)  --------->ARR14(2) <-------GAMYB--------->HSFC1(2)  <---------ARR14(2)<---------MYB46(3)                                 ---------->DOF2 <------ZmHOX2a(1)<-----------HVH21                               --------->AHL20(2) ->REM1(2)       --------->DEAR3(1)                              --------->AHL20(2)       <------ZmHOX2a(1) --ZAT14   --------->YAB1--------->ATERF1(1) *TSS         ----------->GT1               <---------TOE2(3)   agaggaaatgctaacatcaccgtcgttgccgccggaaaattccatcttaaatgttttgttttgttaaataaaaaaaagactagagtttttgaggaactta  18280200                   <------MYB83                  <---------AtMYB61               <-----------RAV1(1)           <---------ANAC58           <---------ANAC46                   <---------ARR14(2)                           --------->AHL20(2)           <---------ANAC58                  <-----------TBP        --------->LBD16        <---------AHL20(2)      <---------ICU4  <-----------HVH21     ------->TEIL          <---------LBD16      ----------->GT1   --------->ANAC46<------MYB46(1)      ------->TEIL       ----------->GT1         <-----------GT1   cttacacatcatgacttgtgttggtgtcagtgagagtgagtgtatgtatatatggaccaagtagataaaccggaaattggtttttgaaccggtttaaatg  18280300                                                                             ---------->DOF2                                                                            --------->AtMYB61                                                                           *TSS                                                                          ------>NtERF2             -                                                                    <------------CBF              <--                                                                   <---------GLK1(2)            -----                       ---------->ID1     <<<<<<<<<TBF1       --------->MYB52(1)                <----      <---------MYB52(1)     <-----------GT1                <---------ARR11(3)             <---------   tgaaacccgtttggatttttgttttgtttttttatctcatcttcttcttcagaaaaacacaagataacagaattgccaccaaagctccatttttatcccc  18280400         <---------ANAC58                                    >>>>>>>>>ARR2           <-----------GT1         <---------ANAC58                               <---------ARR14(2)         --------->GLK1(2)        --------->HSFC1(2)                              --------->ARR14(2)        <---------GLK1(2) -------->ANAC46                                <---------GLK1(2)     --------->ANAC46 -------ALFIN1                                --------->LBD16>>>>>>>>>ARR1        <---------ARR14(2) ------>RAV1(1)                              --------->LBD16--------->ATHB12      --------->ARR11(3) -----ALFIN1       --------->YAB1            --------->HSFB2a(2)    --------->ZAT6--------->ARR14(2) --GT1  <---------HSFC1(2)--------->CCA1(2) <---------LBD16<---------YAB1       ----------->ARR10   acacagaagaagcttggggaatgagaagataagagctctcaaaattccccgaatttcgaatatgattgtaacactaaaccctaagattctccatttctcc  18280500                            <---------ARR14(2)                            --------->ARR14(2)                            ------->TEIL                            <---------ARR11(1)                   --------------------->WRI1              --------->HSFB2a(2)                                            --------->At4g35610              <---------HSFB2a(2)                                            <---------At4g35610        <----------DOF2    <---------ARR14(1)                         --------->ANAC58          -----        ------>ZmHOX2a(1)  <---------CCA1(2)            --------->YAB1--------->ANAC58    -----------   aaaatccatcctttttctcgaccttcttcgtatctctgtagaactcgaaatgtgtctctgataaccaattgcaagcttcagaagcctcaagatggtaatc  18280600  Previous    Next  AGI:  At1g49370.1    Description:  pseudogene, similar to OSJNBa0072F16.8, blastp match of 42% identity and 6.6e-73 P-value to GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza sativa (japonica cultivar-group)} Range:  from: 18278718    to: 18280145    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g49380.1    Description:  cytochrome c biogenesis protein family. similar to hypothetical protein OsJ_012198 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28715.1); similar to hypothetical protein OsI_013219 [Oryza sativa (indica cultivar-group)] (GB:EAY91986.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47670.1); contains InterPro domain ResB-like (InterPro:IPR007816) Range:  from: 18280375    to: 18283196    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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