Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------AHL20(2)                                                --------->YAB1                                                <--------ATHB1                                          <-------GAMYB                                      ------>ZmHOX2a(1)                                         ------>ZmHOX2a(2)                                   ========                                         =====================================HOX2a_HOX2a  ------>ZmHOX2a(2)                                         ----------->GT1                                  <------ZmHOX2a(2)                                       <---------ARR11(3)                                <---------ARR14(2)                                --------->AHL20(2)                                       --------->ARR14(2)                                <---------AHL20(2)<---------YAB1                         --------->ARR11(3)                            <---------AHL20(2)  <---------AHL20(1)           --------->AHL20(2)                            --------->AHL20(2)  --------->AHL20(2)           <---------AHL20(2) <----                            <---------YAB1--------->TOE2(3)                  --------->AHL20(1) <----                           --------->AHL20(1)   <---------ICU4         ==========================HOX2a_HOX2a                           <---------AHL20(1)  --------->ICU4          ===========================HOX2a_HOX2a --------DOF2              --------->AHL20(2)--------->YAB1            <------ZmHOX2a(1) <---------ARR11(3) -------DAG2        <-----------GT1    --------->ARR11(3)       <---------ANAC58        <------ZmHOX2a(1) >TEIL <---------YAB1     --------->YAB1<------ZmHOX2a(2)       <---------ANAC58        =============   cttttccttctgattttgtttttaacaaatataatttataagatcgttaataatttttgtttgatttcttgcaggaaaataaaatatgtaggatcctcct  17943400                          <---------YAB1                         --------->AHL20(2)              --------->At4g35610 ================HOX2a_HOX2a                                                       <---------ZAT6 ------DOF2   <---------At4g35610                                      <------ZmHOX2a(1) -----DAG2------>ZmHOX2a(2)                                    <---------------AGL15 ================HOX2a_HOX2a                        ---------->DOF2   ----------->GT1   ttttctatttgatctcatcttccaaatttttataaacatttgagcaattgatgtcaaagtgaatacaaaaacaggaaatatagtagtcttatataagaca  17943500                                                                 --------->YAB1                                                                --------->ICU4                                                              --------->YAB1                                                    --------->TOE1(3)                                                    --------->TOE2(3)                                               <---------AHL20(2)<---------ICU4                                        <---------LBD16       <---------ICU4              ---------->DOF2   <-----------GT1                <---------AHL20(2)<---------MYB59 --------->ZAT6   ----------->GT1   attgtttactatataacaactatatgcaaacaagaattaatctacggatttaaacctaaactaaaaatgatcactaacttgatgaacaagttaaaagccc  17943600                                                                                                -----                                                                                      ------------>CBF            <------ZmHOX2a(2)                                                     <---------ATHB12       <---------LBD16     --------->GLK1(2)                   ---------->DOF2------------>CBF  -----   ------>MYB83 ---------->DOF2   --------->YAB1    --------->CCA1(2)  --------->MYB52(1)      <-----   ------>MYB46(1)  ---------->DOF2  <---------GLK1(2)   <XXXXXXXXXXXXXXXXXXXXMIR863-5P    ----------   aaacctatctctggatcagaaagaaagagaagctaatcagagtctcagagagagatttgggcttaaaaagacataacaggcccaataactcaattaagcc  17943700                               <---------ANAC58                               ----------->GT1   <---------RAP2.3(2)                               <---------ANAC55(1)                               <---------ANAC46  <---------DEAR3(1)                               <---------ANAC58 --------->ATERF1(1)            --------->CCA1(2) ------------>AGL1<---------ZAT18             --------->ETT(2)      *TSS--------->LBD16 ------->CBF ----------->RAV1(2)--------->LBD16<---------ATERF1(1)  --------->GLK1(2)       ------>ZmHOX2a(1) ------------AG   --------->ZAT18   ---------->DOF2 <-----------ARR10 <---------LBD16   <---------ARR14(2) >DOF2    ------->GAMYB        <---------ANAC55(2)------>NtERF2    <---------GLK1(2)    --------->ARR14(2)   caattcggataacacccctgcgcacaagatgatgcgtgaaaagataagtcgacggctcttctccgataagattccggtgagaaacgagcaggtcctgtct  17943800                                                     <---------ETT(2)                                                    ---------->ARF1                                --                                         ------>ZmHOX2a(1)                                        ---            <---------ARR11(3)          --------->TOE2(3)                     <---------At4g35610 <--     ------->TEIL      <---------YAB1   --------->TOE1(3)<---------ALFIN1     --------->At4g35610 <--   tcttatgaactcaatttcttcatttctgattctataaaacatccttaaaaacatgtctaccacattgttgagaacaattcagctaaaccagttctcactt  17943900                                                     --------->HSFB2a(2)        <---------ANAC46                             <---------HSFB2a(2)        <---------ANAC58                           <---------ANAC46    ------>NtERF2        <---------ANAC58                       <---------ARR11(3)     --------->DEAR3(1)       --------->STY1(2)                       --------->ARR11(3)   ------->GAMYB       <---------STY1(2)                  <-----------HVH21      --------->MYB52(1) ------->ANAC46               <-----------GT1<---------AtMYB61--------->ANAC58 ------>HSFB2a(2)          ----------->GT1--------->LBD16--------->ANAC58 -------HSFB2a(2)         <------ZmHOX2a(1)<---------MYB52(1) --------->ANAC58  ------->TEIL      --- -------LBD16       <------ZmHOX2a(1)   <---------LBD16  --------->ANAC58     ---------->DOF2  ------   ctcggaactagcttgttaagaaggagaaggagtaacaacttctccgtgaggtcttgtggaagccaaacaacgacgacccatgaagctaaacagtcttctc  17944000                                  -------->P                                  ------>MYB83                                ------->GAMYB                               --------->MYB46(3)                               <---------MYB52(2)                               <---------MYB55(2)                              -------->P                              --------->ANAC58                              --------->ANAC58                          --------->ANAC58                       --------->At5g28300                          --------->ANAC46      <---------YAB1--------->At4g35610                          --------->ANAC58   --------->GLK1(2)--------->ZAT2      <--------P        ---------->DOF2     <---------GLK1(2) <---------At4g35610          --------->ZAT2 -------->RAV1(1)   --------->TOE2(3)     ----------->ARR10  ------->TEIL                  --------->At4g35610 --->HSFB2a(2)     <----------ID1 ------>MYB46(1)            --------->GLK1(2)             <---------At4g35610   caacaagggttgctccaaaaaaccacaaaagcaaccaacttgatgagattctgagagattacgaagctgtaattgggatagagactcatgttcagctctc  17944100                                                                                              <------                                                                                              <------                                                                                              <------                                                                                          <----------DOF2                                                                                         <---------ANAC58                                                                                  <---------AtLEC2                                                                  ------>ZmHOX2a(1)      <---------ANAC58             <----------DOF2        <---------TOE2(3)          ---------->ID1     <---------ANAC58            <---------DAG2         <---------At5g28300 --------->ANAC58           ----------->RAV1(2)       ---------->DOF2         <---------ICU4          --------->ANAC58           <---------ANAC58   tacattgacaaaagccttttgtagttgctctaacaattacggttcttatccaaacacaagtatttgtcctgtttgtatgggtttgcctggtgctttgcct  17944200                                                                                                 <---                          <---------ZAT6                                                      <------ ---ANAC46              <------MYB83               ----------->GT1                 ================== ---ANAC58              <------MYB46(1)     <----------DOF2 ---------->ID1         <------ZmHOX2a(1) ---ANAC58    <---------MYB46(3)    <---------ANAC46 <---------YAB1                ==================   gttttgaattccaaagttgttgaatttggtgttagattgggtttagctttgaattgtgatttgtctcttaagtctaaattcgataggaagcagtattttt  17944300  Previous    Next  AGI:  At1g48520.1    Description:  GATB (GLU-ADT SUBUNIT B); glutaminyl-tRNA synthase (glutamine-hydrolyzing). similar to unnamed protein product [Vitis vinifera] (GB:CAO71491.1); similar to hypothetical protein OsI_035196 [Oryza sativa (indica cultivar-group)] (GB:EAY81237.1); similar to Aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94201.1); contains InterPro domain GatB, central region; (InterPro:IPR006107); contains InterPro domain Glutamyl-tRNA(Gln) amidotransferase B subunit; (InterPro:IPR004413); contains InterPro domain GatB N-terminal region; (InterPro:IPR006075); contains InterPro domain GatB/Yq Range:  from: 17943768    to: 17946490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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