Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <------MYB83                                                                           <------MYB46(1)                                                                          --------->MYB55(2)                                                                         <---------ANAC46                                                                       <---------ANAC46                                                                       <---------MYB46(3)                                                                      --------->ALFIN1                           ----------->GT1                            <---------AtMYB61                           <---------YAB1     <---------At5g28300    <---------ZAT14                   ------>NtERF2              --------->RAP2.6(3)   --------->ALFIN1                  --------->ALFIN1           --------->MYB52(1) ---------->DOF2         <---------YAB1                  <---------DEAR3(1)        <---------SPL7   --------->At5g28300      --------->YAB1             --------->MYB52(1)         --------->LBD16  <---------ALFIN1<---------MYB55(1)  <---------AHL20(2)     --------->YAB1 <------NtERF2    --------->AtMYB61--------->MYB111(2)  <---------AHL20(1)    --------->ICU4 --------->RAP2.6(2)   --------->LBD16  ----------->GT1  --------->AHL20(2) <---------ANAC46 <---------LBD16   <---------MYB55(2)--------->MYB111(1)  --------->AHL20(1)<------NtERF2---------->DOF2        --------->MYB46(3)<---------MYB46(3)---------   ctaataaaataagaaaaacggtggcgatgatgaaaaaaaggccggacttacggctactaccaccgtgaaagtgtggtgggtagtagaatgatgctaaagt  17914600                                                                                                   <-                        <----------DOF2                         <---------AHL20(2)               <---                      ------>ZmHOX2a(1)               ------>ZmHOX2a(2)                          ----           <---------At4g35610                       <------ZmHOX2a(2)                           <---           <---------ZAT2   --------->HSFB2a(2)     --------->ARR14(2)                    ---------->DOF2           --------->ZAT2   <---------HSFB2a(2)     <---------ARR11(3)                   --------->YAB1           ----------->RAV1(2)                      <---------ARR14(2)                --------->WOX13(1)    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->ARR11(3) --------->TOE2(3)<---------ATHB12 ->DOF2    --------->At4g35610--------->REM1(1)<-----------GT1<---------YAB1    <----------DOF2 -----   atccaaaggttacagctgagcctcctctttctacaacttcacccatttttatccgatcttcactattattttgcctcaacttctttctcaatcaaagttc  17914700                                                                                                    <                                                                                                    <                                                                                                 <---                      <---------MYB52(1)                                                         ----                    <------MYB46(1)                                                           -------                   --------->MYB59                                                            <------   <---------TOE2(3)----------->GT1                                                         <------MYB83   <---------TOE1(3)<------MYB83                                                            <------MYB46(1)  <-----------GT1<---------MYB52(1)                                <---------At4g35610      <--------  <---------DOF5.7(2)<-------GAMYB                           --------->DAG2                --------->MYB59 ---------DOF2 <------MYB46(1)                      --------->AHL20(2)                    <-------TEIL ---MYB83      <---------DEAR3(2)                   --------->AHL20(1)                 <------MYB46(1) ------->GT1   <------MYB83                         <---------AHL20(2)                 <------MYB83<- ---MYB46(1)  --------->MYB59                   <---------AHL20(2) --------->At4g35610--------->MYB59 ---->MYB59 <---------MYB52(1)       <---------MYB52(1)     ---------->DOF2   ------>ZmHOX2a(2) <----   ggtttaacgtttcggttcggttcggttatatcggttttcgttttttttgttaaattttttggaaaagtatgctgaattgatccgatattaggttcggttc  17914800         <----------DOF2       <------MYB83       <------MYB46(1)      --------->MYB59     <-------TEIL  <---------DEAR3(2)  <------MYB46(1)  <---------HSFB2a(1)  --------->HSFB2a(1)  <------MYB83  <---------HSFC1(2)  --------->HSFC1(2) <---------AtMYB61 --------->MYB46(2) --------->MYB111(1) ----------->ARR10 --------->MYB59 --------P                                                      ------>MYB83 ---------MYB55(1)                                              ------>MYB46(1) ------HSFB2a(2)                                                --------->MYB52(1)           <------- ----->HSFB2a(2)                                              ------->GAMYB            --------->AHL20(1) -->ARR14(2)    <---------MYB52(1)                            <---------MYB59          --------->AHL20(2) ---ARR14(2) <---------LBD16                               --------->MYB52(1)          <---------AHL20(2) -DEAR3(2)   <---------ANAC46                              <-----------GT1    <---------ANAC55(2) --------MYB52(1)                                    ----------->GT1         <-------TEIL    <------- -----ANAC46<---------LBD16   <-----------GT1     --------->MYB52(1)   ----------->GT1--------->AHL20(2)   gggtaggttcggttttcgggtaattcggtttttaactgggtatgtgcaaaaaaaaccgaaataaccgaacagaaggaaatacataaaaaaaaattgggtt  17914900                                                                                   <------ZmHOX2a(1)                                                                             --------->YAB1                          --------->ANAC58                                --------->WOX13(1)      <--                          --------->ANAC58        ----------->GT1       ------------>CBF  <---------AHL20(2)                 <---------At4g35610    ---------->DOF2            --------->AHL20(2)     --------->AHL20(2) --ANAC58        ----------->RAV1(2)<---------ANAC55(2)   --------->TOE2(3) <---------ATHB12     <--- --ANAC58--------->AHL20(2)        <-------TEIL <------------CBF   <---------AHL20(2) ----------->GT1   tgtgcaaaaaaaaaaattcaactgggccaagctaaaatacataaaaggcccattgtaaaaccatagaaaataaatgcaatcagaaggacagtttaatttt  17915000                                               --------->HSFB2a(1)                                         ---------->DOF2                                   <-----------HVH21                              --------->AHL20(1)             ---------->DOF2   <---------AHL20(2)        ---------->DOF2       --------->AHL20(2)       --------->HSFB2a(2)    --------->AHL20(2)    - ---------GT1                 <---------AHL20(2)    <----------DOF2   <---------ZAT14    ----------->RAV1(2) --------GT1  *TSS       --------->AHL20(2)    <---------HSFB2a(1)    --------->ZAT14---------->DOF2<   taacccatttcaaagaaaacaattccaaaaaataaaatgtcagaaaagaattttcttttagaataaagacagtgaagagatttatttcaaagcctgggtt  17915100                                                                                               ------   --------->At4g35610      <---------------AGL15                                             -------   <---------At4g35610     <-----------------AGL1    <---------ANAC58                         <------   --------->ZAT2          <-----------------AGL3    <---------ANAC58                      <---------ALFIN1   <---------ZAT2          >>>>>>>>>MYB98   --------->ANAC58                           --------->At4g35610 -------->At4g35610    --------->TOE1(3)    --------->ANAC58                       <-----------GT1 ---------At4g35610    --------->TOE2(3)  ---------->DOF2           ------>ZmHOX2a(1)  <---------At4g35610   taagctgctgagagaacacaaaaaaccctaacaaaaatggaatcgaaagcaatttgcttagggtttcttcctccaagacttcgattttcatctccacgtt  17915200                                                                                <---------DAG2                                                                                --------->TOE1(3)                                                                     --------->HSFC1(2)------>ZmHOX2a(1)                                                                     --------->HSFB2a(1)                      ------>ZmHOX2a(1)   --------->YAB1           <---------GLK1(2)  --------->TOE2(3) --->DOF5.7(2)     ------>ZmHOX2a(1)   ------->GAMYB      <-----------GT1       --------->TOE2(3) >MYC3       ------>ZmHOX2a(1)        --------->MYB46(3) <-----------GT1  <---------HSFB2a(2) -MYC3    ------>ZmHOX2a(1)         <-----------GT1   <---------AHL20(2)  --------->HSFB2a(2)   tactctctcttcctccttctcctcctgtaagtgaaatttaaccatcaaaatttcatttttttccatttcgattcttccaaaaccttatcctaaaatttgt  17915300                                        <-----------TGA1                                        <-----------HVH21               <---------CCA1(2)                                       --------->ANAC58            --------->ARR11(3)                                       --------->TGA1a             <---------ARR11(3)                                       --------->O2         --------->TGA1a         <---------GLK1(2)             --------->bZIP60(2)  --------->ANAC58       <---------YAB1                  --------->ANAC46     <---------TGA1a       ------>ZmHOX2a(1)               --------->ANAC58     --------->ANAC58     ----------->RAV1(2)              ------>NtERF2         --------->ANAC55(1)        ------>ZmHOX2a(1) --------->ARR11(3)                  <---------O2           --------->ANAC46        ------>ZmHOX2a(1) <---------ARR11(3)                  --------->O2       <---------HSFB2a(2)--------->YAB1 --------->ARR14(2)               ----------->HVH21     --------->HSFB2a(2)--------->TOE2(3)       <-   caatatctcctgattctataggcttcttccacatttgcgacgcgtcacaaacttgattccagacgtaagtatctctatcttaaatcctcctacttcaccc  17915400                                                                                             <-------                                                                              <---------At4g35610                                                                      --------->LBD16        <-------                                                                     --------->ANAC46        <-------                                                                     --------->ANAC58        <-------                                                                     --------->ANAC58    --------->REM1(2)                                                                     --------->RAP2.6(2)<---------REM1(1)                     <----------DOF2   --------------->AGL15      --------->MYB52(1)  <---------ANAC58         ---------->DOF2         <---------YAB1  <-----------GT1<---------MYB52(2)    <---------ANAC58      --------->YAB1 ------>ZmHOX2a(1) <---------------AGL15    --------->MYB46(3)    <---------ANAC46 --------GLK1(2)   ------>ZmHOX2a(2)<---------YAB1       <----------DOF2      --------->At4g35610   agattgtagcataaagactgatcctttttctcattttcattcttgtttaagaaaccctcctttggaacaaaccgcaattgagccgagttcgtgtagcgtg  17915500  Previous    Next  AGI:  At1g48460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63040.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61244.1) Range:  from: 17915014    to: 17916968    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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