Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ======================                                                                               ----------------->AGL3                                                                               <-----------------AGL2                                                                               <-----------------AGL3                                                  --------->ARR11(3)   <---------AHL20(2)                                                <---------YAB1<---------ARR11(3)                                                <---------TOE2(3)<---------AHL20(2)          <-------                                           <---------AHL20(2) <---------AHL20(1)            ---------                <-----------GT1            --------->AHL20(2) --------->ARR11(3)<---------------AGL15          <---------GLK1(2)               --------->AHL20(2)  --------->AHL20(1)--------------->AGL15   agtagatttatagaattttttcttctcaatataagatgatgcaaattaataagattatgtcaaatattttttttatattgttctatttttggctaatcta  17715900                                 ---------->DOF2      <---------AHL20(2)        <---------AHL20(2)                                          <------MYB46(1)   ----------->GT1      --------->ARR11(3)        <---------YAB1                            <------MYB83   <---------MYB46(3)   <---------ARR11(3)       <---------AHL20(2)                         <--------  <--------P         <---------TOE2(3)           --------->AHL20(2)                     <-----------RAV1(1) ========MADS_MADS  ---------->DOF2            <---------AHL20(2)                   --------->ICU4 --------AGL15     <---------AHL20(2)        <---------AHL20(2)         ---------->DOF2<---------YAB1 >GLK1(2)          --------->AHL20(2)      <---------CCA1(2)  ----------->GT1       <---------YAB1   tatggtagttaattttaaaaattaaagatgtcatttaaagtctgcatatatttttataaaaaataagttatatgcaaagtaatgggattattgttggttt  17716000              <----------DOF2       --------->AHL20(2)          <---------At4g35610  <---------DAG2        <---------ZAT18     <---------ALFIN1                     ---------->DOF2  <----------DOF2      <---------ICU4                   ----------->GT1 <----------DOF2       --------->YAB1                  <---------------AtSPL8 <---------DAG2    <---------AHL20(2)<---------AHL20(2)--------------->AtSPL8--------->YAB1         - -MYB46(3)--------->At4g35610  --------->TOE2(3)      ---------->DOF2 <----------DOF2        <-------   gggccttttgtgagctcttttttaatcttcacaccttataaaattgggcattcttggaaagtacaaataaagcttttactcatactttggactcaatctt  17716100                                         --------->LBD16                                        <---------HSFB2a(2)                                        <---------ANAC46                                        --------->HSFB2a(2)                                       <---------LBD16                         <---------------AGL15                         --------------->AGL15                                                      <                        <-----------------AGL1 <----------ID1                                       -                    <----------DOF2    ----------------->AGL1                                      --                <---------ANAC58     <---------ARR14(2)                 <----------DOF2            <-            <----------DOF2          --------->ARR14(2)                <---------ANAC58          ----           <---------ANAC58         <---------GLK1(1)           <-----------GT1    --------->At4g35610 --------->DOF2 <---------ANAC58    --------->GLK1(1)          <-----------GT1     <---------At4g35610 --ATHB12  <---------ANAC58        <----------DOF2    <---------ATHB12 <---------ANAC58          <---   tgaaaagagtatttctttccgtctttacaaaatttggcatttccggagagggacaaatgatgtttttacccttgctttcccttactgctgaaaactccat  17716200     ---------->ID1 ---------ICU4                         <---------DAG2 -------->ATHB12                 --------->ZAT2 ------->ICU4                    <---------ZAT2 --------YAB1                 <---------ANAC58 ----->YAB1             --------->ZAT6 <----------DOF2 ------ICU4  <---------YAB1   <---------ANAC58    <---------ALFIN1         <-----------HVH21      <--   catcattgtcgtcttatgctcgcttctcactaccgtgctcgcttttttagcaccatctccatcaattctatcaacgctgtcattttcaattctatcaata  17716300                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                 --------------->AGL15     --------->AHL20(2)                                                                ----------------->AGL3     --------->YAB1                                       --------->ARR11(3)       ------------>CBF      ------------>CBF                                       <---------ARR11(3)       ----------------->AGL2<---------ATHB12                                --------->AtMYB61  --------->ZAT18          <------------CBF      <--                               --------->MYB46(3)  <---------ZAT18        --------->ARR11(3)      ---    <----------DOF2     <---------ARR11(3)         --------->ZAT14        <---------ARR11(3)   ------ -------ALFIN1          --------->ARR11(3)         <---------ZAT14       <<<<<<<<<RAP2.2--------->WOX13(1)   ccacctctttcgccttcaattccaaacatctctaccaccaagataatgtatagtgaacttaatgactccaattttagatattgatcaaatcaattaaaaa  17716400    <---------AHL20(2)   <---------AHL20(1)                                                               <-----------GT1   <---------AHL20(2)                                                           <---------AHL20(2)   --------->AHL20(2)                                                           --------->AHL20(2) --------YAB1                                                                  <---------AHL20(1) --- --------AHL20(2)                                        --------->ANAC58      --------->AHL20(1) --- ------->AHL20(2)                                        --------->ANAC58      <---------AHL20(2) <-- ------>AHL20(1)                                       ---------->DOF2         --------->AHL20(2) <-- -------AHL20(1)                                 <---------ZAT6     <---------ARR11(3)           <--- ------>AHL20(2)                               <---------At5g28300  <---------AHL20(1)           ---- --->AHL20(2) ---------->DOF2                 <-----------GT1       --------->AHL20(1)         ------   tataattttttttctcaaaagacataacccaaactaaaattttagatgttactgttacaaagcaaaacaaaatatttcgaatttattttcaaatctaaaa  17716500                                                                                               <-----                                                                                               ------                                                        <------------CBF        <xxxxxxxxxxxxxxxxxxxx                                                 <---------RVE1(1)             --------->DREB2C(2) ------>AHL20(1)              <---------GLK1(2)  <---------CCA1(1)            <------NtERF2    ------ ------>AHL20(2)              <---------ARR14(2)<---------ARR11(3)           ------>NtERF2     <----- -------AHL20(2)      <------------CBF         <<<<<<<<<RAP2.2               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------AHL20(1)     --------->ATHB12  <---------ARR11(3)           <---------ARR11(3) <---------ANAC46 ------AHL20(2)     <---------YAB1   --------->ANAC58<---------AHL20(2)   ------>NtERF2<---------ANAC55(2) ----->AHL20(2)   <---------MYB46(3) --------->ANAC58<-----------GT1--------->ARR11(3)<---------TOE2(3) --->YAB1 <-----------GT1     --------->ARR14(2)--------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   taaatttgaaatttacatgtttgttattggcaaattctcaagaaattttagatatttacattgatcaaaacatctctgccaccgatataacgtatagtga  17716600                              <---------ATHB12        ------------>CBF  <---------WRKY38(1)   --------->MYB46(3)    <<<<<<<<<<WRKY43 <-----------GT1         <<<<<<<<<<WRKY38                                                          -- --------->MYB52(1)      <<<<<<<<<<WRKY26               ---------->DOF2                            -- ----ZAT18              <-----------HVH21            ------>ZmHOX2a(1)                            <xx --->ZAT14          <------------CBF                --------->TOE2(3)                            ---- xxxsmallRNA(fl3)<<<<<<<<<<<<<<<<<LFY            <-----------GT1                           <---------ZAT6 --->ZAT18     --------->HSFB2a(2)        --------->AHL20(2)                             <---------At5g28300 ----ZAT14     <---------HSFB2a(2)        <---------AHL20(2)                            <-----------GT1   acttaacgactccaattctagacattggtcaaatcaactaaaatttatatttttcctcaaaagaaataacccaaactaaatttttagatgttactgttac  17716700                                      <---------AHL20(1)                                      <---------AHL20(2)                                      --------->AHL20(1)                                      --------->AHL20(2)                      <---------AHL20(2)                      --------->AHL20(2)                     --------->AHL20(2)                     <---------AHL20(1)                                        <---------ARR11(3)          --------->AHL20(1)         --------->AHL20(2)               --------->ARR14(2)          <---------ARR11(3)     --------->AHL20(2)                   <---------ARR14(2)          <---------AHL20(1)     <---------AHL20(2)                   <---------GLK1(2) ------->ANAC58      --------->AHL20(1)                        <---------WOX13(1)                  -- ------->ANAC58      <---------AHL20(2)                      --------->ATHB12--------->ANAC58   ----- xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------AHL20(2)     <---------YAB1   --------->ANAC58 ------- ------>DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <-----------GT1----------->GT1              <------   aaagcaaaacaaaatatttcaaatttattttcgaataaaataaatttgaaatttacatgtttgtgattggcaaattctcaagaaattcgcgactaaaatc  17716800  Previous    Next  AGI:  At1g48010.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] (TAIR:AT1G50325.1); similar to pectinmethylesterase inhibitor [Actinidia deliciosa] (GB:BAC54966.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 17715160    to: 17716329    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version