Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                              <------                                                                                          <-------TEIL                                                       <---------ARR11(3)              ----------->GT1          <---------YAB1                               --------->ARR11(3)             <--------------         <---------AHL20(2)                            --------->ARR14(2)             ---------------         --------->AHL20(2)                            <---------ARR14(2)             <-------------- --------HVH21             >>>>>>>>>MYB98             <------ZmHOX2a(1)               --------------- ---->TOE1(3)          ----------->GT1        <---------YAB1                     ------->TEIL ------- ---->TOE2(3)<---------------AtSPL8  ------->TEIL  <------ZmHOX2a(1)        --------->At4g35610 -----   ttcacatgtattaatatagtacatttagtaacatagttgaatctacttatgaaggaggatttttcatatggcagaattagatgaatatgtggtacatata  17440400    <-------TEIL    ------->TEIL -------------->AtSPL3 -------->SPL7                                 ------>ZmHOX2a(2) ------>TEIL                                  --------->CCA1(2) -------TEIL                                  --------->ARR14(1) ---------TOE1(2)                             <------ZmHOX2a(2) ------>TOE2(2)                              <---------AGP1 ------>TOE1(2)                              --------->AGP1 ----->ANAC55(2)                             --------->ARR14(2) ----->ANAC46                                --------->ARR14(3) ---------->AtSPL3                           --------->ARR11(3) ---TEIL                                     <---------ARR11(3) -----------AtSPL3                           <---------ARR14(2) -----------AtSPL8                           <---------ARR14(3) ---ARR14(2)                             ---------->DOF2<---------HSFB2a(2) -AtSPL8                          <---------ANAC55(2)   --------->HSFB2a(2) >AtSPL3                          --------->ANAC55(2)   <---------HSFC1(1) -AtSPL3                         <---------LBD16        --------->HSFC1(1)                 --------->AHL20(2) >AtSPL8       --------->YAB1   --------->CCA1(2)  <----------DOF2             --------->ZAT2  <----- -->ARR14(2)  <---------ATHB12 --------->ARR11(1)  <---------DAG2              --------->At4g35610 ---------->AtSPL8           <---------YAB1----------->ARR10         <---------At4g35610   <---------AHL20(2)   cgtacgtacatttccattcatgttccatgtgatgatacggatgcaaagatctgcttttctagaaaaactgcaactgttaacagcttcgattgttttaata  17440500        --------->ICU4      --------->At4g35610      <---------At4g35610          ------>ZmHOX2a(2)                            ----------->RAV1(1) --------->O2                     <------ZmHOX2a(2)                   --------->CCA1(2) <---------O2                    <---------ARR14(2)                <---------YAB1 <---------ANAC46                --------->MYB52(1)               <---------TOE2(3) <---------TGA1a                 --------->ARR14(2)              --------->YAB1--------->MYB46(3)   < --------->TGA1a              --------->DEAR3(2)         --------->GLK1(1)--------->ANAC46      <---- ------GT1                   ------->TEIL <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC46    -----   ccgtcgtgagatgatgagtttttcgcaaatgaaccgatcggagacttcttgtagttcggaaacctattgatgatatacacaacaacacatataagttata  17440600                                                                                          <----------DOF2                                                                                         <---------DAG2                                                                                      <-----------GT1                                                               --------->ARR11(1)  <---------ICU4                                                               <---------ARR14(2)  --------->YAB1                                                               --------->ARR14(2) --------->ICU4                                                               <---------GLK1(2)<---------ICU4                                                         --------->ANAC46       --------->ATHB51                                                         --------->ANAC58       -------->ATHB1                                                         --------->ANAC58       --------->YAB1                                                 ------>MYB83----------->ARR10  <--------HAHB4                                                 ------>MYB46(1)               <---------ATHB51                                                --------->MYB52(1)             <---------ATHB12    -- -------TEIL                                   --------->TOE2(2)               --------->ICU4 <------ -----AHL20(1)                                --------->MYB46(3) <-------TEIL--------->WOX13(1)<----- ---->ARR11(3)     ----------->GT1            <---------MYB52(2)--------->ARR14(1)<---------YAB1  ---   tattcatatgtctatctacaagagttacaaatacttgtatatatagaaaccaacgtagcaagcaagattcgtttgataccaattattattacctttttaa  17440700                                                              <---------YAB1 <---------ALFIN1                    ----------->GT1       --------->GLK1(2) --------->ANAC46                    <---------ZAT6       <---------GLK1(2) --------->RAV1(1)           <------NtERF2                <---------ARR11(3) -----GT1                 --------->RAP2.6(3)      --------->DAG2                                 <-- ------GT1         >>>>>>>>>>>>>>>>>LFY <-----------GT1 ----------->ARR10                 <---------AHL20(2) ---->GAMYB  <---------YAB1--------->ETT(1)      ---------->DOF2                         --------->AHL20(2)   cccacacatcgaattcttattccccattgtcggcatgtagtgttactctgtaaaaggcaagattctaattgtttttttttagagagagaaattttatcga  17440800                                                                                           <---------WOX13(1)                                                                                          <----------                                                                                         --------->ATHB12                                                     <---------TOE2(3)                  <---------YAB1                                                     <---------TOE1(3)              --------->ARR11(3)                                             ------------>CBF                      <---------AHL20(2)                                            --------->ANAC58                     <---------AHL20(2)                                            --------->ANAC58                     <-----------TBP                                            --------->ANAC46                   --------->AHL20(2)                                       <---------MYB59                         <---------AHL20(2) <--                                       --------->TOE2(3)                       <-----------TBP  <----                                       --------->TOE1(3)                     <-----------TBP  <------                                     --------->GLK1(2)                       --------->AHL20(2)------                                    *TSS  ---------->DOF2        ------------>CBF--------->AHL20(2)                             <---------AHL20(2)     <-----------GT1     <-------TEIL<---------AHL20(1) ----ZmHOX2a(1)---------->DOF2   --------->YAB1   --------->AHL20(2)  --------->YAB1--------->AHL20(1)   ggagaagtttgcgaagttaaagagaaatgatataatgagaacctaaaagcaatttaacgatgttatcttcaatattcatatatatatatattgattgggg  17440900                              <---------ANAC46                              <---------bZIP60(2)                              <---------O2                              <---------ANAC55(1)                              <---------ANAC55(2)                              --------->ANAC55(2)                              <---------ANAC58                     ------------>CBF                    --------->ANAC58                    --------->ANAC58                    --------->ANAC46                   ------->MYC2                   <---------ANAC55(2)       --------->ALFIN1                   <-------MYC4                   <------MYB46(1)         <---------O2                   <-------PIF5                   ----------->GT1         <---------ANAC58                   <-------MYC2                   <------MYB83            --------->O2                   ------->PIF5                  --------->MYB46(2)       <---------ANAC58                   ------->MYC3                  --------->MYB59          <---------ANAC46       XXXXXXXXXXXXXXXXXXXX>MIR164C        <------ZmHOX2a(1)              <---------ANAC55(2) --CBF XXXXXXXXXXXXXXXXXXXX>MIR164A/B   <---------HSFB2a(2)               <---------ANAC55(1) ---------TBP      <-------PIF4         --------->HSFB2a(2)   --------->WRKY38(1) ---GAMYB          ------->PIF4         --------->HSFC1(1)    --------->WRKY45 ------->TEIL ---TOE2(3)        <-------MYC3         <---------HSFC1(1) <---------ANAC46<---------------AtSPL3 ----->GT1       <-------TEIL <---------ANAC58   --------->MYB111(1) ---------->DOF2   ttatataagagaaactaggcacatgcaatgttacgtggttttctaggaagttaggtaaatggtgttgactacaaagacgtgtacgtcttcgaatggacgg  17441000                                             --------->HSFB2a(2)                                       <---------GLK1(1)                               --------->ATHB12                             --------------->AGL15                            <-----------------AG               <-------TEIL                            <-----------------AGL1          ----------->GT1                  <---------ANAC58     --------->GLK1(1)   --------->DAG2                  <---------ANAC58   <------ZmHOX2a(1)     <---------------AtSPL8                ----              <----------DOF2<---------------AGL15       ---------->DOF2                        <----        --------->YAB1      <-----------------AGL3<------ZmHOX2a(1)    --------->GLK1(2)     --------        <---------ICU4    <-----------GT1    <---------HSFB2a(2)      <---------GLK1(2)      <-------   tcgaatttgataatgactttgctggttttttcttcattaggaaatctctagaggaaatagaaaggtacaatagaatctttgatttttgaagaaattttaa  17441100                              <---------At4g35610                              <------NtERF2                                                        <-                              <-------GAMYB                                                    <-----                            <---------ANAC58                         <---------bZIP60(1)       <-----                            <---------ANAC58             <---------ICU4                     ---------      <-----------GT1      <---------LBD16               --------->YAB1                     <-------- ----->ICU4          --------->ICU4                     <---------YAB1                   <---------ANAC58 -----TOE2(3)   ----------->GT1     ------>ZmHOX2a(2) --------->YAB1 <---------TGA2(1) <---------ANAC46 ->AHL20(2)    <---------ICU4<---------MYB46(3)    --------->ANAC46  --------->bZIP60(1) <---------ANAC46 --AHL20(2)   --------->ICU4<---------ANAC46       --------->bZIP60(2)    ----------->GT1<---------ANAC58   tgtttatattacagtaatcagtaaatattggcggatgatcgatacacttatccacatcatcatcacatgtgatgtaatgtaaaacaattttgtgtgtgct  17441200                                                                        <---------AHL20(2)                                                                  <-----------GT1                                                              <---------ARR14(2) --------YAB1                                                 <---------GLK1(2) ----ANAC58               <-----------GT1         --------->CCA1(2)    --------->AHL20(2)       <---- ----ANAC58          --------->AHL20(2) --------->YAB1        --------->ARR14(2)                ----- >ZAT18     --------->AHL20(2)         <---------YAB1     <---------LBD16                       <---- -ZAT18     <---------AHL20(2)       --------->YAB1    --------->At4g35610                    -------   tatgctaaactaatttaaacaaaaaaaatcacttctctactataatactgagaaatgagcttcggatttttcattttataaaaaaaaaaaactgaataga  17441300  Previous    Next  AGI:  At1g47510.1    Description:  endonuclease/exonuclease/phosphatase family protein. Identical to Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis Thaliana] (GB:Q5EAF2;GB:Q9SX81); similar to FRA3 (FRAGILE FIBER3), inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT1G65580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61232.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 17438041    to: 17440836    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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