Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <------ZmHOX2a(1)          --------->ANAC46                --------->CCA1(2)             --------->ANAC58               <---------ARR14(2)             --------->ANAC58         <---------HSFB2a(2)     <----------DOF2                                                   --         --------->HSFB2a(2)   <---------HSFC1(2)                                            --------     --------->TOE1(3)         --------->HSFC1(2)          <---------ICU4                  <---------LBD16     --------->TOE2(3)--------->ICU4 <----------DOF2    --------->REM1(1)   --------->AtLEC2---------   gccctaaccttatagaagataggaatgactagaagctttctttcatctacgcattccttcatcttgacaatctcatccatacaaaacctcgactccgcaa  17370700               ----------->RAV1(1)           <---------WOX13(1)         --------->ATHB12     <------ZmHOX2a(1) ---------->DOF2 --------->MYB52(1)                      --------->ARR11(3) ------->TOE2(3)                         <---------ARR11(3)          --------->YAB1 ->LBD16--------->AHL20(2)        <---------YAB1       <------ZmHOX2a(1)                      ------- >ANAC46<---------AHL20(2)--------->AtLEC2    --------->YAB1         <-----------GT1    <---------YAB1   acctaaaggattaattgccacatagtccatacaaatactattagatattgatgactaggacaataagtcaataaccatttttaaaattttgtgataactc  17370800                                    ---------->DOF2                                --------->ANAC58                                --------->ANAC58                              ------->GAMYB                             --------->MYB46(3)                            -------->P                            --------->ANAC58                            <---------ANAC55(2)                        --------->ANAC58                              <---------AHL20(2)         ----                        --------->ANAC46                          <---------AHL20(2)             <---                      ---------->DOF2                             --------->AHL20(2)           <-----                    --------->TOE2(3)                             <---------YAB1               <-----      --------->STY1(2) --------->ANAC58  <-------TEIL       --------->LBD16               --------->ATHB12 -->ZAT6  <---------TOE2(3) --------->ANAC58------->TEIL   <---------LBD16               <---------WOX13(1)   taaaccctagctaatgttgaaacattaagcaaccaagaaaaagatgcatctatgaactacttccggttttaattaagtgaaggaatcagagattgatagg  17370900             --------->TOE1(2)        <---------ICU4        --------->YAB1     <--------HAHB4                                                   <-----------HVH21     <---------ICU4                                                <---------ANAC58             <----    --------->ICU4                                      ------>ZmHOX2a(1)                     -------    <---------YAB1                                     --------->TOE1(3)              <-------MYC3  --------->YAB1                                       <---------------AGL15          ------->MYC3 ------>ZmHOX2a(1)                                     --------->TOE2(3)             --------->ANAC46 ----->ARR14(2)                                       ------>ZmHOX2a(2)   --------->ANAC58<---------ANAC58 ------ARR14(2)                                 <----------DOF2    <---------ANAC58  <---------O2 -MYB83<---------YAB1   --------->At4g35610<-----------GT1 ---------->DOF2--------->ANAC58<---------ANAC58 -MYB46(1)<-----------GT1              <----------DOF2<-----------------AGL3         --------->O2   <   ttcctcataattatacctgctagagaagatgaccagggcaacttttgactctttgatccttaaaaggagacttgtcaagtcatttccacgttgctcgtct  17371000                                                <---------ANAC46                                               <------NtERF2                              ---------->DOF2  <---------At4g35610                      --------->ARR11(3)      <---------MYB46(3)                         <------ZmHOX2a(1)                      --------->ARR14(2)     --------->ALFIN1                --------->HSFB2a(2)                      <---------ARR11(1)     <---------RAP2.6(2)             ------>ZmHOX2a(1) <-----     --------->YAB1   <---------ARR14(2)   <---------O2           <-----------ARR10    <---------TOE2(3)    <---------YAB1   <---------CCA1(2)     --------->ZAT2         ------->TEIL        --------->MYB52(1) ------DOF2      ------>ZmHOX2a(2)         <---------bZIP60(2)    --------->GLK1(2) <---------MYB52(2) --->ID1  ------->TEIL<---------ARR11(3)   --------->O2     ----------->HVH21<---------LBD16   <----- <<<<<<<<GATA-1<---------ARR11(3)          <---------ZAT2   ----------->TGA1 --------->LBD16<--------   ttatctatgatgaacatgatcccatatctctctaaagcatcagcgaggtggctgataaacccatgacgaatctcttctcctcggaaactaaggaacactt  17371100                                   <-----------HVH21                         ----------->ARR10                  ------->TEIL    --------->ANAC58      <------ZmHOX2a(1) <------ZmHOX2a(1)                            <---------ZAT14 ----DAG2--------->HSFB2a(1)  --------->ANAC58               <----------DOF2     --------->ATHB12 -----DOF2      <---------ZAT14   --------->ANAC58     <------ZmHOX2a(1)    <---------YAB1 -ALFIN1 <---------HSFB2a(1)  --------->ANAC58   <------------CBF   <----------DOF2        <---------ZAT14   tagggacaggaacatttctgtaccgaggagacacgctcgtcatatataagagattgaggacgactttgtactttagtgattcttgattaagagagtagag  17371200                                             ----------->TBP                   --------->DAG2        <-----------TBP                                            -                  ---------->DOF2    <---------ANAC58                                               <            ----------->GT1          <---------ANAC46                                          <-----           <---------ANAC46          <---------ANAC58          ---------->DOF2            --------->RAP2.6(3)       <------------CBF             ---------->ID1             --------->ZAT14          ----------->HVH21     <---------AHL20(2)         <----------DOF2   ---------->DOF2     ---------->DOF2 <---------ANAC55(2)    <---------ATHB12          ------->TEIL --------->YAB1--------->GLK1(2)  <-----------HVH21  <-----   aggctaatgaattgtggataaaaagtagaacgtactttggcttatttataaaaaaagagaatcactaaagtacaaagtcgtcacaaacacatgacgactt  17371300                            ---------->DOF2                 <---------------AGL15                 --------------->AGL15  <------------CBF         <---------WRKY45 -------->AHL20(2) ----------->TBP                        <---------ZAT18             --------->YAB1 ---------AHL20(2) --------->AHL20(2)<-------TEIL         --------->ZAT18            <---------YAB1 -----DOF2  <---------AHL20(2)   <-------TEIL    <----------DOF2---------->DOF2    --------->GLK1(1) ----DAG2  --------->AHL20(2)<---------------AtSPL3  ---------->DOF2               <---------GLK1(1)   tataaattggctattaaatctataaatagtcaaagtacgttcattagagagctttgaaagtccacaaaaaacgcttcaaaaatggatatcataactcgtg  17371400                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                  <xx                                                                                                  <xx                                                                                                 <xxx                                                                                               <xxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                            xxxxxxxxx                                                                                            <xxxxxxxx                                                                                            <xxxxxxxx                                                                                         --------->At4g35610                                                                                      <------ZmHOX2a(2)                                                                                     <xxxxxxxxxxxxxxx                                                                                     <-----------HVH21                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)<-                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)<x                                                                       ----------->RAV1(1)<xxxxxxxxxx                                                                       xxxxxxxxxxxxxxxx>smallRNA(s)<x                                                                      ----------->HVH21  <xxxxxxxxxxx                                                                     <---------At4g35610xxxxxxxxxxxxx                                                                     --------->At4g35610<xxxxxxxxxxxx                                                                xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxx                                                                --------->ARR14(2) <xxxxxxxxxxxxxxxxx                                                                <---------ARR14(2)xxxxxxxxxxxxxxxx>smallRNA(s)                                                               xxxxxxxxxxxxxxxx>smallRNA(i)----------                                                               xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxx                                                              xxxxxxxxxxxxxxxx>smallRNA(i)-----------                                                             <---------TOE1(2) --------->MYB46(3)<xxx                                                           <xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxx                                                        <-----------HVH21<xxxxxxxxxxxxxxxxsmallRNA(s)                                                       <-----------RAV1(1) --------->At4g35610 <-----                                                 <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          --------->AHL20(2)    xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxsmallRNA(i)           <---------HSFB2a(1)                 --------->MYB52(2) xxxxxxxxxxxxxxxx>smallRNA(i) ------           <---------HSFC1(2)             xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->HSFB2a(1)           --------------------->WRI1 <xxxxxxxxxxxxxxxxsmallRNA(s) <xxx           --------->HSFC1(2)  --------->YAB1  xxxxxxxxxxxxxxxx>smallRNA(i)<---------At4g35610<xxxxxx          <---------------AtSPL3        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->DEAR3(1)<xxxxxx   gataaatacaagaaggtaccgtagccaaaaaaatcatatacagccttgttcgtttctctgtcgctggattcagcgacagcgaccagcgatcagcgacagc  17371500    ----------->RAV1(1) <xxxxxxxxxxxxxxxxsmallRNA(s) ------>GAMYB -------->TOE2(2) -------->TOE1(2) ------->MYB46(3) ----->P    --------->ARR11(3) xxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxsmallRNA(s) xxxxxxxxxsmallRNA(s) xxxxxxxxxsmallRNA(i) xxxxxxxxxxxsmallRNA(se3) xxxxxxx>smallRNA(i) xxxxxxxxsmallRNA(i) xxxxxxxxsmallRNA(s) xxxxxxxxsmallRNA(le3) xx>smallRNA(si3) --------MYB55(2) xxxxxxxxxxxxxxxsmallRNA(s)                           <xxxxxxxxxxxxxxxxsmallRNA(s)      xxxxxxxxxxxxx xxxxxxxxxxxxxsmallRNA(se3)                     <xxxxxxxxxxxxxxxxsmallRNA(s)            --------->MYB52(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxx xxxxxxxxxxxsmallRNA(si3)                      <xxxxxxxxxxxxxxxxsmallRNA(s)            xxxxxxxxxxxxxx xxx>smallRNA(s)                              <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxx xxxxxxxxxxxsmallRNA(se3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <xxxxxxxxxxxxxxx xxxxxxxxxxxsmallRNA(fl3)         <---------TOE1(2) <---------At5g28300              xxxxxxxxxxxxxxxx xxxxxxsmallRNA(se3)             <---------MYB52(1) ---------->DOF2                  xxxxxxxxxxxxxxxx ->RAV1(1)  --------->AHL20(1)  <-------GAMYB<xxxxxxxxxxxxxxxxsmallRNA(s)            xxxxxxxxxxxxxxxx xxxxxx>smallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       xxxxxxxxxxxxxxxx>smallRNA(s) >HVH21----------->RAV1(1)      --------------------->WRI1                         xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxsmallRNA(i)      <---------MYB46(3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxx xxxxxxxx>smallRNA(fl3) <---------MYB46(3) --------->DEAR3(1)                    --------->ALFIN1 ----At4g35610          --------->MYB52(2) <xxxxxxxxxxxxxxxxsmallRNA(s)          xxxxxxxxxxxxxxxx>smallRNA(i) --->At4g35610      --------->MYB52(2)xxxxxxxxxxxxxxxx>smallRNA(i)        <-----------HVH21 xxxxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(fl3) ----------->RAV1(1) ---------->DOF2       -- xxxxxxxxxxsmallRNA(i) <---------TOE1(2)  <---------At4g35610            ------->GAMYB<xxxxxxxxxxxxxx xxxxxxxxxxsmallRNA(s)<---------MYB52(1)  --------->At4g35610           <------------AtMYB77 <-------   aaccagcgacaacatatattgttcgtttgtttgtcgttggattcagcgaccaattacagcgacaatcgctaataactgtcaaagtgttgttcgtttgact  17371600  Previous    Next  AGI:  At1g47370.1    Description:  Toll-Interleukin-Resistance (TIR) domain-containing protein. similar to Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G03030.1); similar to Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G03300.1); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 17368338    to: 17371143    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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