Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ICU4                                                                   --------->YAB1                                                       --------->LBD16  ----------->TGA1                                 <---------ICU4       --------->HSFB2a(2)                           -                                <---------YAB1        <---------HSFB2a(2)                           -                    --------->MYB46(3)               <---------LBD16  <---------ICU4             ----                   --------->ANAC58               <----------DOF2--------->GLK1(2)        <------ZmHOX2a(1)                   --------->ANAC58      ---------->DOF2    <---------ZAT14       ----------->RAV1(1)   caaaaacttatgaaattttgcaaccaattgcctcataaatgcttaaagcttactttccggagtgaagaatcattctgacgaagccaacaagaggaacagt  17173500                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                       ----------->HVH21            <-----------GT1                                                     <----------DOF2           <-----------GT1                                                     <---------HSFB2a(1)          <---------AHL20(2)                                       ------>ZmHOX2a(1)   --------->DEAR3(1) -------->TOE2(3)                                               ------>ZmHOX2a(1)    ------>ZmHOX2a(1) -------->TOE1(3)                                         ------>ZmHOX2a(1)    --------->HSFB2a(1) ----->ARR14(2)       <---------ATHB12    <------------------------ANAC81<---------LBD16------>NtERF2   aacctcaaggattttatcttcccaatcgacgaactcatcaccttcgctgttctcttcttcctcttcctcctcttcttcggagctttcctccgacgcaata  17173600                                                           --------->GLK1(2)                                                          <---------GLK1(2)                                                          <---------ARR14(2)                                        <---------------AGL15     --------->ANAC58                                        --------------->AGL15     --------->ANAC58                                       <-----------------AGL1    --------->SPL7                                       ----------------->AGL1   <---------MYB52(1)                                       <-----------------AGL3  <---------SPL7         --------->ANAC58              <-----------------AGL2 <---------ANAC58         --------->ANAC58--------->SPL7----------------->AGL3 <---------ANAC58        <---------ANAC46     <------NtERF2     <---------RAP2.6(3)                --------->ARR14(2)          <---------ANAC58    ------>NtERF2  --------->ARR14(2) <---------At5g28300<---------At4g35610          <---------ANAC58   --------->DEAR3(1)--------------->AtSPL3           <---------MYB52(1)   <------NtERF2  --------->DEAR3(2)------>NtERF2--------->LBD16     <-----------HVH21    ------>NtERF2  --------->ATERF1(1)<------NtERF2    <---------DOF5.7(2)--------->At4g35610     <---------O2 ------>NtERF2     <---------ARR14(2)<-----------GT1--------->DEAR3(1)   <---------ANAC46           <   cgaggccgacgaagcaattcggagccgtaagactccgagttaccgattttagcaccgtcagattccgttcgcaaggcgcgaactcgtggcctgagagaag  17173700                                                                <---------LBD16                                                                <------NtERF2                                                                --------->At4g35610            --------->At5g28300                                 <---------At4g35610           --------->LBD16                                 --------->ANAC58         --------->LBD16                                   --------->ANAC46         <---------LBD16                                   --------->ANAC58    --------->ANAC58      --------->DEAR3(1)                                  --------->RAP2.6(3)  --------->ANAC58    <---------At5g28300                                   --------->SPL7<---------ZAT14   <---------WRKY38(1)                      <------ZmHOX2a(1) <---------DEAR3(1)        ----------->TGA1 <-----------HVH21                 <------ZmHOX2a(1)  <---------------AtSPL3 ---------->DOF2 ---------ZAT6                 --------->ALFIN1    <---------REM1(1)  <---------SPL7    ----------->HVH21   tagagtcaccgcgcgggaaatataaacagagaggtgaggaagagaaggagaagatgtaagtacggcagcggaagtacggtgaagccactggtgacgacga  17173800                                                                                                  <--                         --------->At5g28300                                                      ---                       <------NtERF2                                --------->At5g28300          <---                      ------>NtERF2                                ----------->GT1            -------                     <---------ALFIN1    ----------->GT1        ------------>MYB.PH3(1)       <------            <---------ZAT2<---------MYB52(1)---------->DOF2 --------->At4g35610          <---------ARR14(2)           --------->ANAC58   --------->ARR11(3)            <---------At4g35610          --------->ARR14(2)           --------->ANAC58   <---------ARR11(3) ---------->DOF2--------->MYB52(1)       --------->GLK1(2)   gggaatcgaagccaagctcatggccaccgtaagatttatgcaagggtaaagaaaagagagagagctaaacggttacattatccattcggagaatcggaac  17173900      <---------ANAC58      <---------ANAC58                                                                       --------  ---------->DOF2           <-------GAMYB                                                   <-------- -------LBD16               <------NtERF2                                     --------->ANAC58 ------>LBD16              <---------MYB46(3)                    <------------CBF <----------DOF2 ------ANAC46              <---------SPL7                       --------->ATHB12 <---------DAG2 -->ARR14(2)             <---------LBD16            <----------DOF2           --------->ANAC58    --- ---ARR14(2)*TSS   <------ZmHOX2a(1)      <------ZmHOX2a(1)   <----------DOF2 --------->ANAC46    <--   cgtggaaagcttgcgaccagaggaatgggcggatggattagagaggaaagtcttctttttgggcctttattgggccttacaagccttttgggttttacaa  17174000                                                                                --------->ATHB12                                                                                <---------ICU4                                                                               <---------YAB1                                                                               --------->ICU4                               --------->MYB52(1) <---------ANAC58           <---------ICU4                             <---------HSFB2a(1)  <---------ANAC46           --------->YAB1 ---->CBF                 <------ZmHOX2a(1)       <---------ANAC58          --------->ICU4 ---GT1                --------->YAB1    --------->AHL20(1)                 <---------ATHB12 ------>YAB1          <---------ATHB12   --------->ARR11(3)         --------->GLK1(2) ----------CBF--------->MYB46(3)         <---------ARR11(3)        <---------GLK1(2) <---------YAB1   tattgatatatgttcaacaatctaatcaggaactatcggcatatatattcttgcttctagtgattcttcgattctgaaatcatcattgttattttgctct  17174100         --------------->AtSPL8        <---------ANAC58        <---------ANAC58                                                    <---------AHL20(2)      <---------YAB1          <---------ARR11(3)          <---------YAB1    --------->AHL20(2)  ----- <-----------RAV1(1)    --------->TOE2(3)                --------->YAB1    <---------AHL20(2) ------- ------>ZmHOX2a(1) <---------YAB1 <---------YAB1      <----------DOF2      --------->AHL20(2) <------   atcctgttgtgcttgtacaacatcattctcaatatcaatattgtcaaactcatagtctttaatattgtgttgacgaataaaattatgtagactcattgta  17174200                                                                                               <-----                                                                                               <-----                                                                                               <-----                                      <------ZmHOX2a(1) ------>ZmHOX2a(1)                      ------                                  --------->TOE2(2) --------->ARR14(2)                        <------   --------->AHL20(2)             --------->TOE1(2) <---------ARR14(2)                        ------- ------>GT1                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               <------ -->ZAT14                  <-----------HVH21  --------->ANAC46                         <---------MYB46(3) ---ZAT14    <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <---------TOE1(2)   gtgaataaaacacttcttttttgtagtaatgtcatacctaggaaattcacgtagaatcctccattttttgtttcatttaagtcgaatgtttgttcaataa  17174300                                                                                                    <                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                            ---------                 <-----------GT1                                                            <--------  --------->ANAC58 --------->ANAC55(2)                                                     <---------RAP2.6(3)  --------->ANAC58 <---------ANAC55(2)                                                     <-------GAMYB  --------->ANAC55(2)                                        --------->AHL20(2)           -----------  <---------ANAC55(2)  <---------YAB1                      <---------MYB52(1)        <---------ANAC58 -------ATHB5  <-----------HVH21                          --------->At5g28300        <---------ANAC58 ----ICU4     --------->bZIP60(2)                        ----------->GT1          xxxxxxxxxxxxxxxxxxx ---ATHB1     --------->ANAC46                         <---------At5g28300       xxxxxxxxxxxxxxxxxxxx --->YAB1    <-------MYC3                            <-------TEIL              xxxxxxxxxxxxxxxxxxxxxx ---ATHB12   ------->MYC3         <----------DOF2   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ANAC46 -->ICU4    <---------O2  <-----------GT1    --------->HSFB2a(2)               <---------ARR11(3)---- ---ATHB51  --------->O2--------->YAB1       <---------HSFB2a(2)               --------->ARR11(3)<---   tggaacgtaatgacacatgtcacctattatacatttctttattgtttcgagagggttcaccgttaaaatactcttgaagatgatattatgtgccgttatt  17174400  Previous    Next  AGI:  At1g45230.1    Description:  defective chloroplasts and leaves protein-related / DCL protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46630.1); similar to Protein DCL, chloroplast precursor (Defective chloroplasts and leaves protein) (GB:Q42463) Range:  from: 17171977    to: 17173912    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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