Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->DAG2    --------->AHL20(2)           ---------->DOF2    <---------AHL20(2)                                              -------          <---------ATHB12   <---------AHL20(2)                  <---------STY1(2)            <------      --------->MYB46(3)     --------->AHL20(2)                  --------->STY1(2)           --------     -------->P   <------ZmHOX2a(1)                         --------->ZAT6                --------->GLK1(1)    --------->WOX13(1)   --------->AHL20(2)                <------ZmHOX2a(2)         ---------->DOF2   gaacatcaaccaataaagcaggacctataaattaaattcacagaaaccaatttcaaaaacgatcactagctacttaaaaaaaaaaaaaaaagagttccaa  16868600                                                               --------->WRKY18(1)                           <---------ANAC55(2)                <-----------HVH21                           ----------->GT1                   --------->YAB1                        <------ZmHOX2a(2)                 --------->YAB1               --------->ARR14(2)                         -------->HAHB4            <---------TOE1(3)                             <---------ICU4         <-------TEIL            <---------TOE2(3)                            <---------ATHB51    --------->ALFIN1      <---------YAB1   <---------ARR11(3)                <---------YAB1    <---------ANAC58    <-----------GT1    --------->ARR11(3)                --------->ICU4    <---------ANAC58 -->HSFB2a(2) <------ZmHOX2a(1)         --------->YAB1 --------->YAB1      <---------ANAC46      <--- ---HSFB2a(2) =================HOX2a_HOX2a            <---------YAB1       ----------->RAV1(2)   ---- --------->AGL3<---------ARR14(2) --------->YAB1    --------->YAB1--------->AtLEC2           --------   aaatgtttaccattaaggatttgaagatcaagtgaatcagtatcaaaaccagactcataataatggtcatggaaatggcctggtgcatcaacatgagttc  16868700                                         ------>ZmHOX2a(2)                                         <-------TEIL                   <---------HSFB2a(1)                                        <------ZmHOX2a(2)               <---------HSFC1(2)                                       <---------ARR14(2)               --------->HSFC1(2)   <---------ZAT14                     --------->ARR14(2)             ---------->DOF2   --------->ZAT14         --------->CCA1(2)             --------->ANAC58   --------->ZAT18        <---------ARR11(3)             --------->ANAC46 ------HSFB2a(2)          --------->ARR11(3)             --------->ANAC58            ------>ZmHOX2a(1) ----->HSFB2a(2)       --------->HSFB2a(2)              <---------LBD16 --------->HSFB2a(1) ->GLK1(1)             <---------HSFB2a(2)             --------->MYB52(1)  --------->ZAT18      <----   cagagtgaacagatagttccatcttcgagatattagcatcggatccattcttcatactcacggcaagtctaagaaagttccctagtccttctgaagactc  16868800                  --------->REM1(2)     --------->ARR11(3)                  --------->ZAT18       <---------ARR14(2)                  --------->ZAT14       --------->ARR14(2)               <---------ANAC46        <---------CCA1(2)               <---------ANAC58    <---------ANAC58               <---------ANAC58    <---------ANAC58             ------>NtERF2         <---------ANAC46             --------->LBD16    <---------bZIP60(1)           <---------LBD16      --------->bZIP60(1)        --------->At4g35610   --------->At4g35610        <---------GLK1(1)     <---------At4g35610                                  --------->ANAC46        <---------At4g35610 <---------ANAC46                                     <-----------GT1    --------->LBD16        <---------At4g35610        --------->LBD16       <------MYB46(1)         <    --------->ANAC46       <------NtERF2<---------ARR11(3)                  <------MYB83           <-  --------->RAP2.6(3)     <---------MYB46(3)          <-----------HVH21    <---------AtMYB61       <-  --------->DEAR3(2)  <-----------RAV1(1)      <----------DOF2            <---------WOX13(1)       -- -------------AGL1<---------ZAT14  ----------->GT1   --------->ANAC46    <---------ARR14(2)<---------ZAT6   ccaaaccggcaactccggcgtgtactggtggctgatgtcgtatatcttcctttctccgtcataaacttcatggtggattggttttacgtcgtagtgttgt  16868900                                                                                            ---------                                                                                           <---------YAB1                                                                                           --------->ICU4                                                                                         --------->YAB1                                                           --------->YAB1                <---------ICU4                                                           --------->TOE2(3)            --------->ICU4                                                          <---------YAB1              --------->YAB1                                                          ----------->GT1            <---------ZAT6        --------->At4g35610                         <---------TOE2(3)            --------->ZAT18    ----------->HVH21                          ------>NtERF2                     --------->ZAT14 -------GAMYB                                 <---------DEAR3(1)                 <---------ZAT14 --------ANAC58                            ----------->HVH21    <---------WOX13(1) ----------->GT1 --------ANAC58 --------->ALFIN1       <-------TEIL <---------TOE1(3)           --------->ALFIN1  <-- ------->MYB52(2)  <---------ZAT6---------->DOF2<------NtERF2<---------YAB1<------ZmHOX2a(1)-------->HAHB4   ttcgttgcgacgctgaaggtagtgggaattgaagggaaagcttcatcgacggcgaaggttatgttaattgaagagaaggagagtgtagtgataatgataa  16869000                       <---------TOE2(2)                     <---------SPL7                                                  -------->HAHB4            <---------YAB1                                                           --------->YAB1          <---------ICU4                        --------->YAB1                    --------->YAB1         --------->ICU4<---------TOE1(2)        <--------HAHB4                <---------ZAT6   ----------->GT1  <---------MYB46(3)         <---------YAB1               ----------->GT1        <-  <---------------AtSPL8<------MYB83         *TSS <---------YAB1        <---------AHL20(2)         --  <---------------AtSPL3<------MYB46(1)    <------MYB46(1)             --------->AHL20(2)         ---  --------------->AtSPL8----------->GT1    <------MYB83               <---------YAB1<---------YAB1<-- >YAB1<-------TEIL  <---------ANAC46      <---------MYB46(3)         --------->AHL20(2)   ----------- ----ZmHOX2a(1)   <-----------HVH21   >>>>>>>ZML2--------->TOE2(3)--------->YAB1<---------YAB1  -----   ggagatggtacattattatgggtcgtaggttacaacggttctagtgggtatcattaatctatagttgataatattatatagtattaataatagagaaata  16869100                                                                    <---------AHL20(2)                                                                    <---------YAB1                                                                 --------->AHL20(1)                 <                                                                 --------->AHL20(2)            ------                                                                 <---------AHL20(1)            <-----  <-----------GT1                                                <---------AHL20(2)            <-----  --------->YAB1                                              <---------AHL20(2)              <------ --------ICU4                                                 --------->AHL20(2)              ------- ------->YAB1                                          --------->HSFB2a(2)                 <---------AHL20(2) ------>ICU4                          <-----------------AGL1 --------->YAB1               --------->ICU4 -------YAB1                         ---------->ID1    <---------HSFB2a(2)                --------->AHL20(2) >GT1  <------------CBF          <---------MYB52(1)   <---------LBD16                  --------->ICU4 ---->YAB1                  --------->GLK1(2)<---------ZAT6  --------->AHL20(2)     <------ZmHOX2a(1)   ataataacaaattgggttttgagtttggagaaactgtttgtctcatagtggtattatctggaattaaaatattatttgagtttggaggaatatttattaa  16869200                 <---------ANAC58                 <---------ANAC58                 --------->ANAC55(2)          <---------ICU4                            --------->ANAC58          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      --------->ANAC58          --------->YAB1                     <---------------AGL15         --------->ICU4   ------->MYC2       --------------->AGL15         <---------ATHB51 <-------MYC3      ----------------->AGL2 ---------AHL20(2)        <-------MYC2      ----------------->AGL1 --->AHL20(2)    <---------ANAC55(2) <---------At4g35610     --------->ANAC58               --------- ----AHL20(1)    <---------ANAC46xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      ---------- ----AHL20(2)-------->HAHB4xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <---------WOX13(1) <---------YAB1 ---AHL20(2)--------->ICU4------->MYC3   --------->KAN4(2)   --------->ANAC58 ----------->HVH21 -->AHL20(2)<---------YAB1------->MYC4 <---------YAB1 ---------->DOF2         ----------->TGA1   atttttatgaaataatgatgcgtaaacatgtgcgatgtaagatgattcccaaacaagaaagtcacacaagattgatatagatgacgaagatgataaagta  16869300               <-------TEIL        <-----------GT1        <---------YAB1             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------MYB46(3) >DAG2     <---------DEAR3(1)   <---------AHL20(2)   ----------->GT1    <---------WOX13(1) >DOF2 ---------->DOF2 <-----------GT1           --------->ATHB12    <---------YAB1      <-----------GT1   tttgactaagaaagcggtgcataatttacttcatttttttcgttacacaaactattggttatatttgcaatctcattgatcaagtttgtttatacgtttt  16869400                   --------->TOE1(2)                  --------->YAB1                 --------->ICU4            --------->ANAC55(2)    --------->ALFIN1                      <----------DOF2            <---------ANAC46     <---------bZIP60(2)                  <---------ARR11(3)            <---------ANAC55(2)  <---------O2                      <---------RAP2.6(3)            <---------ANAC58     <---------TGA1a                   ------>NtERF2            <---------ANAC58     <---------ANAC46                  <---------DDF1   --------->AHL20(1)            ===================================================bZIP_DOF   <---------AHL20(2)          --------->ZAT14               <---------ANAC58   --------->AHL20(2)          <---------ZAT14               <---------ANAC58  --------->AHL20(2)        <---------ANAC55(2)<---------GLK1(2)  <---------ETT(1)              <----   taaaaaaaattgatgcgtaaacatgagattaagtgaagtgggatagaaagaatttcatattgggcatgccgacatcttttagttctatgactatttggat  16869500  Previous    Next  AGI:  At1g44542.1    Description:  cyclase family protein. similar to cyclase family protein [Arabidopsis thaliana] (TAIR:AT4G34180.1); similar to unknown [Populus trichocarpa] (GB:ABK95930.1); contains InterPro domain Putative cyclase (InterPro:IPR007325) Range:  from: 16867410    to: 16869045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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