Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------ARR14(2)                         <                                                     <---------ARR11(3)                            <-                                           ------>ZmHOX2a(2)                                       --                                          <---------RVE1(1)                                       ---                             <----------DOF2<----------DOF2                                   <------                       ---------->ID1    --------->AGP1  --------->ARR14(2)                <---------ARR11(3)                   <----------DOF2       --------->ARR11(3)                           --------->TOE2(3)             --------->PCF2 <---------DAG2<------ZmHOX2a(2)  --------->LBD16        <-------TEIL <--- --------->LBD16<---------ALFIN1         <---------ARR11(3)<---------LBD16    <-------TEIL --------->ARR11(3)   taccgcaaaatttggctcccactttgtctcccttttgttttgagatctttttcaagataaatccggtctatgtagtcacatacacatacattagatttta  16793300                                                                                <-----------GT1                                                                            <---------YAB1                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                          --------->YAB1                                                                         <---------YAB1                                                                      --------->AHL20(2)       <-----                                                                      <---------AHL20(2)       ------                                              --------->YAB1          <---------YAB1          <------ZmHOX2a(1)          --------->At4g35610           <---------------AGL15      --------->ARR11(3)      <------NtERF2 ---------YAB1                          --------->TOE2(3)          <---------ARR11(3)     --------->LBD16 --------ARR11(3)                       --------------->AGL15      --------->AHL20(1)    <------NtERF2 ------->ARR11(3)       <---------TOE2(3) --------->AHL20(2)       <---------AHL20(2)    <---------ANAC46 ------>YAB1          ---------->DOF2  <---------ANAC55(2)         <---------AHL20(1)   <---------LBD16 ---AHL20(2)       --------->YAB1<---------YAB1                    --------->AHL20(2)<-----------HVH21 ------YAB1       <---------YAB1 --------->ICU4                   --------->AHL20(2)--------->ANAC46   tgatcatatataagctgtatatgataaaggttgtcacgattacataaattagaatttgaaaattctaaatatattattaaaattactcgtcgcggaggat  16793400                                                         --------->ANAC55(2)                                                         <---------ANAC58                                                         <---------ANAC55(1)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                         <---------ANAC46                                   --------->At5g28300   <---------ANAC58           <---------AHL20(1)           <-----------GT1        ----------->GT1        <---------ANAC55(2)    --------->AHL20(2)     >>>>>>>>>MYB98               --------->LBD16     <---------MYB52(1)        <---------AHL20(2)    <-----------GT1              --------->ATERF1(2)--------->ANAC55(2)        <---------YAB1       x   <-----------GT1               <---------ATERF1(2)--------->ANAC46           --------->ICU4   <----  --------->AHL20(2)      <-----------GT1   ---------->DOF2                 <---------AHL20(2)------- ----ARR14(2) <---------DAG2    --------->RAP2.6(3) <---------ANAC55(2)     <---------YAB1   -------- --->ARR14(2) <----------DOF2  --------->MYB52(1)   --------->ANAC55(1)     --------->AHL20(2)<------   tcaatttaacatattacttttcaaaattttacatgccggtaaaaaaaaaagaatacgttacgtattatttgaattcatataattaatatgtttttcgtta  16793500                                                                       <---------YAB1         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->YAB1       --------->ARR14(2)                                            <---------ICU4       <---------ARR14(2)                                            -------->HAHB4      <------ZmHOX2a(1)                                             <---------ATHB51    <---------TOE2(3)     --------->ATHB12                          --------->ICU4   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                           --------->YAB1  --------->CCA1(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                              <---------ICU4 <---------ARR11(3) -----DOF5.7(2)   --------->ATHB12                               <---------AHL20(2) -->DOF5.7(2)   <-------GAMYB                            --------->ARR11(3)      --------->ARR11(3) ->TOE2(3)   <---------ANAC58    ----------->GT1         <---------ARR11(3) <---------ATHB12 ---MYB52(1) <---------ANAC58 --------->ATHB12  <---------GLK1(2)--------->AHL20(2)   gcgatgaaggatagggggtgttattggtttattgattgtaaatctatatagaatttgaacatctctattaattatgaaatcaagatatatggattttgaa  16793600                                                                               <---------GLK1(2)                                         <----------DOF2                       <---------ARR14(2)                                     ---------->ID1                            --------->ARR14(2)    ------->MYC3            ------>ZmHOX2a(1)                   --------->AHL20(2)    <-------MYC3  ------->TEIL      <-----------GT1  ------------>CBF--------->YAB1                 -   ataacatgtgtttacccatgaatttgaatccttctatttttctctttcaaatccattcaatttcatttaaaacataatttggattctcaaatccaaaaac  16793700                                                                                          ------>NtERF2                                                                                         >>>>>>>>>AtERF-4                                                                                         >>>>>>>>>AtERF-3                                                                                       xxxxxxxxxxxxxx                                                                                       <---------At4g35610                                                                                       xxxxxxxxxxxxxx                                                                                       --------->ZAT2                                                                                       --------->At4g35610                                                                                       <---------ATERF1(1)                                                                                <----------DOF2                                                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)    <xxx                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxx                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------                                                      ------->TEIL    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      <-------TEIL    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                  <---------------AtSPL3    xxxxxxxxxxxxxxxx>smallRNA(i)                                                  --------------->AtSPL8  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                  --------------->AtSPL3xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <---------ZAT2                                              ----------->GT1  --------->At4g35610xxxxxxxxxxxxxxxxxxx                                              <------MYB83<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxx                                              <------MYB46(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  -                                           <------ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(i)--------->ATERF1(1)                                         <---------TOE2(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxx                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->MYB52(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <-----------GT1        *TSS  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -------->AHL20(2)  <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------------AtSPL8xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   aaataactaaacgaataacaaagtttggacaagttttcaggcttaggatggtaatgtacatcatcaactggagagacatcaactttgggagctgccaatc  16793800                                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                            <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                           <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                          <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                         --------->MYB46(3)                                                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                                                        xxxxxxxxxxxxxxxx>smallRNA(s)                                                                       ------>NtERF2                                                                       <---------RAP2.6(3)                                                                      --------->DEAR3(1)                                                                      --------->ATERF1(2)                                                                      --------->RAP2.3(3)                                                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                                                     --------->RAP2.3(1)                                                                     --------->DEAR3(2)                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                    ------>NtERF2                                                                 <------MYB83 <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                 <------MYB46(1)                                                                 xxxxxxxxxxxxxxxx>smallRNA(s)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 xxxxxxxxxxxxxxxx>smallRNA(i)                                                                <---------MYB46(3)                                                                xxxxxxxxxxxxxxxx>smallRNA(i)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                               <xxxxxxxxxxxxxxxxsmallRNA(s)                                                               <---------WOX13(1)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                             --------->ATHB12<xxxxxxxxxxxxxxxxsmallRNA(i)                                                             xxxxxxxxxxxxxxxx>smallRNA(s)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           <xxxxxxxxxxxxxxxxsmallRNA(s)                                                           xxxxxxxxxxxxxxxx>smallRNA(s)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       xxxxxxxxxxxxxxxx>smallRNA(s)                                                       xxxxxxxxxxxxxxxx>smallRNA(i)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     xxxxxxxxxxxxxxxx>smallRNA(s)--------->ARR11(3)                                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                     xxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxsmallRNA(s)                                                  xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxsmallRNA(s)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                 xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(s)                                                 xxxxxxxxxxxxxxxx>smallRNA(s)------->GAMYB                                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                <---------DEAR3(1)xxxxxxxxxxxxxxxx>smallRNA(i)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                        xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        <xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxx>smallRNA(s)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxx>smallRNA(s)                                    --------->ARR11(3)<---------ANAC46<---------ETT(1)                                    <---------ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   <---------At4g35610<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   --------->At4g35610xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                              --------->ALFIN1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------REM1(1)                 xxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(i)--------->MYB46(3)                <----------DOF2   <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(i)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ARR11(3) xxxx>smallRNA(si3)         --------->ZAT2------>ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxx>smallRNA(se3)     <---------ZAT2----------->RAV1(2)<xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)        xx xxxxxxxxxxxxxxxxxx>smallRNA(i2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s) xx ->WOX13(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              xx xxx>smallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)        xx xxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(s)           xx -------->At4g35610xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <xxxxxxxx xxxxxxxxxxxsmallRNA(i)   ------>NtERF2<xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxx>smallRNA(s)  xxxx   tcagaagaagtctatctcctttacatgccgaggtggaagctctcctctgggcgatgaagtgtatgattggtgccgacaaccaagatgtagtttttcttac  16793900                                  -------->P ------>NtERF2                                 xxxxxxxxxxxxxxxx>smallRNA(s)                                 --------->MYB52(1)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        <xxxxxxxxxxxxxxxxsmallRNA(i)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <xxxxxxxxxxxxxxxxsmallRNA(i)                    <---------AtMYB61       <xxxxxxxxxxxxxxxxsmallRNA(s)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <xxxxxxxxxxxxxxxxsmallRNA(s)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <---------ANAC46   <xxxxxxxxxxxxxxxxsmallRNA(s)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           <-----------RAV1(1)  --------->MYB46(3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          ------>ZmHOX2a(2)     <---------ALFIN1<----------DOF2         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxx>smallRNA(s)         <------ZmHOX2a(2)    <xxxxxxxxxxxxxxxxsmallRNA(s)         xxxxxxxxxxxxxxxx>smallRNA(s)       <xxxxxxxxxxxxxxxxsmallRNA(i)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------RAP2.6(3)         --------->CCA1(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------AGP1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        --------->ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(s)        --------->AGP1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->ARR14(2)<---------ANAC58  <---------ATERF1(2)        <---------ARR11(3)<---------ANAC58  <---------DEAR3(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------RAP2.6(2)       <---------CCA1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxx>smallRNA(i)------>MYB83<------NtERF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->RAP2.6(2)      ----------->ARR10xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxx>smallRNA(s)------>MYB46(1)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ATERF1(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------LBD16 <---------ARR14(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxx>smallRNA(s)                       <--------   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <xxxxxxxxxxx  <---------ZAT14xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->ARR14(2)           <xxxxxxxxxxxx xxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)                     --------->ANAC58 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(i)               --------->CCA1(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)------->GAMYB       xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------- xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <----------ID1<-------- xxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <------ZmHOX2a(1) --------->YAB1 xxxxxxxxxxxxxxxsmallRNA(si3) --------->HSFB2a(2)     xxxxxxxxxxxxxxxx>smallRNA(i) --------->ANAC58 < xxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxx>smallRNA(i)  <   agactgttcagatctggtggagatggtgtcttccccaaccgaatggccggctttctcatcgtatttggaggagttacagagagacaaggatgagttcaca  16794000                                                                         ------->GAMYB                                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       ------>MYB46(1)                                                                       -------->P                                                                       ------>MYB83                                                                      ------>MYB83                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    --------->MYB46(3)                                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                    <---------MYB59                                                                   --------->ANAC58                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   --------->ANAC46                                                                   --------->ANAC58                                                                  --------->SPL7                    x                                     --------->DAG2               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    ---------->DOF2             <---------SPL7                     xx                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        <---------ANAC58                    xx             <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <---------ANAC58    <-----------GT1<xx           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               xxxxxxxxxxxxxxxx>smallRNA(s)       xxx           <----------DOF2       --------->TOE2(3)            --------------->AtSPL8             xxxx           --------->TOE2(3)    <---------ZAT6                <-------TEIL <xxxxxxxxxxxxxxxxsmallRNA(i)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               --------------->AtSPL3           <xxxxx          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxx    <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxx -ZAT14   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       --------->ANAC58------>MYB46(1)          <xxxxx xxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   --------->DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxsmallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->DOF2--------->MYB46(3)    xxxxxxx >ZAT18 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxx -ZAT18<---------CCA1(2)       <---------TOE2(3)      --------->ANAC58--------->MYB52(1)      xxxxxxx ----------DOF2    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxx ---------DAG2    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxx   aacttttttctatctttaatctctcgtagtactaatgttaaagtggattttttggcacgaaaagttcgtacccaaccgcttcatattacatttgtaaaca  16794100                   <xxxxxxxxxxxxxxxxsmallRNA(i)               <xxxxxxxxxxxxxxxxsmallRNA(i)               <xxxxxxxxxxxxxxxxsmallRNA(s)             <xxxxxxxxxxxxxxxxsmallRNA(s)          xxxxxxxxxxxxxxxx>smallRNA(i)         --------->ARR14(2)         <---------ARR14(2)        <xxxxxxxxxxxxxxxxsmallRNA(s)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->ATHB12        <------ZmHOX2a(1)       xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxxxxxxxxxxxxx>smallRNA(s)      xxxxxxxxxxxxxxxx>smallRNA(i)      xxxxxxxxxxxxxxxx>smallRNA(s)     xxxxxxxxxxxxxxxx>smallRNA(s)     xxxxxxxxxxxxxxxx>smallRNA(i)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <-----------RAV1(2)    ------>ZmHOX2a(1)    xxxxxxxxxxxxxxxx>smallRNA(s)   xxxxxxxxxxxxxxxx>smallRNA(i)   xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxxxxx>smallRNA(s)  xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxx>smallRNA(i)                <---------AtLEC2 xxxxxxxxxxx>smallRNA(s)   ------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------AHL20(2) xxxxxxxxxxxxxxxx>smallRNA(si3)<---------AHL20(1) xxxxxxsmallRNA(si3)       --------->ICU4                                <------ZmHOX2a(1) xxxxxxxxxxxxxxxx>smallRNA(fl3)--------->AHL20(2)                      <---------TOE2(3) xxxxxxxxxxxxxxxx>smallRNA(le3)<---------AHL20(2)                    ---------->DOF2           <----- xxxxxxxxxxxxsmallRNA(i2) <---------MYB59                  --------->MYB52(1)            --------->YAB1   acattcctcaggattggctcgtttgagtcctaattaatttttggatgacaaaaaaaaaaaaaaacgaataacaaaggattttagttagtatttataaatc  16794200  Previous    Next  AGI:  At1g44140.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 16793724    to: 16794143    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version