Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->YAB1                                                                          <---------YAB1                                                                        <---------ICU4                                                     --------->GLK1(2)  --------->YAB1           ----                                           --------->ARR14(2)        --------->YAB1             -----                                           <---------ARR14(2)       --------->ICU4              -----                                          <---------MYB52(1)        <---------YAB1              -----                                      --------->MYB52(1)          --------->YAB1                -----                                   xxxxxxxxxxxxxxxx>smallRNA(i)  <---------YAB1               <------                                   --------->ANAC55(2)   --------->YAB1--------->ICU4      --------->ANAC58                                   <---------ANAC55(2)  <---------YAB1 <---------YAB1      --------->ANAC46 ---->TEIL  <---------ANAC46      <---------LBD16   <---------GLK1(2)<---------ICU4        --------->ANAC58 -------->AtSPL8                 <-----------GT1 xxxxxxxxxxxxxxxx>smallRNA(i)     --------->ARR11(3)-   caccttctaacaagtcgtagaacttatttgaatagttacggaccggttcttccacattctgataactatcatcatgatgatagttatcttcataccccac  16752600                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                      ------>ZmHOX2a(2)                                    <---------ARR11(3)                                    <---------ARR14(2)                                    --------->ARR11(3)                           <---------------AGL15                           --------------->AGL15                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          ----------------->AGL2         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------ICU4      <---------AHL20(2)  ----------------->AGL3                                               ------     <---------AHL20(2)   <-----------------AGL2                                           --------->LBD16     --------->AHL20(2)   <-----------------AGL3       ------>MYB46(1)                    <---------ANAC58 <---------YAB1           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <---------ANAC58 ----->TOE2(3)   --------->WRKY38(1)------->TEIL       ------>MYB83                       <---------ANAC46 ---->ANAC58    --------->DOF5.7(2) --------->ARR14(2)<---------ALFIN1                 <---------ARR14(2) ---->ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->MYB46(3)                --------->ARR14(2) ---->O2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)----------->RAV1(1)                      ------>ZmHOX2a(1) ---->ANAC46------->TEIL--------->ARR14(2)  --------->REM1(1)    --------->ATHB12<---------ANAC55(2) ---ALFIN1<-------TEIL  <---------ARR14(2)--------->HSFB2a(2)   <---------YAB1   --------->ANAC55(2) -------->AHL20(2)     <---------CCA1(2)  <---------HSFB2a(2)   --------->ICU4  <-------TEIL   ------   gttaaaattaaatgcatcgttcaccatatccacatatggatcttctacaacattacccacttcttcatgattcgaactaaaatacgtcctatccgtgtaa  16752700                                                    <---------ICU4                                                    --------->YAB1                                                   --------->ICU4                                                 --------->YAB1                                              --------->YAB1                                            ------>MYB83                                            ------>MYB46(1)           <---------WRKY18(1)          <---------CCA1(2)               <---------MYB46(2)       --------->TOE2(3)        ------>ZmHOX2a(1)                 <---------MYB59  --------->YAB1                          -- --------->AtSPL3   <---------ICU4       --------->ANAC46--------->ANAC58                        <--- --------->AtSPL8  <-------TEIL        <-----------GT1   --------->ANAC58                  --------->ZAT6   gtactcgttcctatatccatattcatttcttctccatgtttataccaaacataataatcaagcataaatccttgactaaacaaatgactactaactcttc  16752800                                                             --------->ZAT14         <---------ANAC46     --------->ANAC46      <---------At5g28300    --------->At4g35610 --------->LBD16              --------->ZAT6 --------->YAB1  <---------ZAT14 --------->ANAC46    <---------ICU4          --------->AHL20(2)   <---------ZAT14 ------->ANAC46     <---------YAB1     <------ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---- ------ALFIN1   <-----------GT1 --------->ANAC46   <-----------GT1--------->ZAT14        ---------->DOF2   cacccgagatgatgtgtttttcattcttgcatacactacaaggacaatgaaatttacctcgactactctgtactataggctgactattagcgaaagtcat  16752900                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ------->GAMYB                                                                                            ---------                           ----------->HVH21                                               --------->MYB46(3)                         --------->At4g35610                                             <---------ALFIN1                         <---------At4g35610                                            <---------MYB52(2)                    --------->ARR14(2)                                                <---------ALFIN1                    <---------ARR14(2)                                             --------->RAP2.6(2)                    ------->TEIL         <---------MYB52(1)                        --------->ANAC58                 --------->ANAC55(2)    <-----------HVH21                          --------->ANAC46                 <---------ANAC46       <-----------TGA1                           ------->GAMYB <---              ----------->HVH21        --------->bZIP60(2)                         --------->ANAC58            ------>ZmHOX2a(1)          --------->O2 <---------CCA1(2)              --------->DEAR3(1)           --------->TOE1(2)           --------->ANAC46                           --------->MYB46(3) -----YAB1----------->RAV1(2)         --------->LBD16                    ----------->GT1--------->MYB46(3)   gaattgctcaactcctgcgacgtatttggctgacaaattccccgtcacttcatcaaatctcttgtacatccaatctcgataaaaaccgccactaccgcca  16753000                                                                                                   --                                         <-----------GT1                                       <----- -------ICU4             <---------AHL20(1)                                                    <----- ------>ATHB51      *TSS --------->AHL20(1)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----->ICU4 ------>NtERF2--------->AHL20(2)                             <-----------RAV1(1)    <----- ------YAB1 --------->LBD16           <---------AHL20(2)          <----------DOF2          <--------- >RAP2.6(2)--------->ANAC46   --------->AHL20(2)         <---------MYB52(1)            --------->ATHB12 >ANAC46  <---------LBD16<---------AHL20(2)    <----------DOF2---------->ID1          <---------YAB1 ------ATHB51       ------------>CBF<---------YAB1--------->AHL20(2)   <---------TOE2(3)   <---------MYB46(3)   taattgtagttttccgccattatacaataaaataaactattattttcttcttttaaatcgttttgtttcttttgatgttgttgttgttttgatttgttgg  16753100                                                                                            ------>MYB83                                                                                            ------>MYB46(1)                                                                                          <---------MYB59                                                                                          <---------MYB46(2)                                                                                          <---------MYB111(1)                                                                                        ------->TEIL                                                                                     <---------REM1(1)                                                                                    --------------->AtSPL8                                                                                    <---------------AtSPL8                                                                                   <------MYB83 -------->DOF2                                                                     <---------ANAC46 -MYB83                                                                            <------MYB46(1) -MYB46(1) <---------ANAC46                           --------->ZAT6               <---------ANAC55(1) ----MYB46(3)       --------->AHL20(2)<---------AHL20(2)        <---------REM1(1) --------->MYB111(1) --RAV1(1) <---------O2            ------->TEIL    <-----------GT1                --------->MYB59   tgaaagaagagcgtcgtggagttttaatatgtagacgaatttttatgacttatttacgactacatgttgtagtcgctcacaaattaggtgtacctactta  16753200                              --------->ANAC46                      ------>MYB83  --------->TOE2(3)              <---------MYB46(3)                      ------>MYB46(1)<----------DOF2       ------->GAMYB                 <-----------GT1 <---------ARR14(2)     ----------->RAV1(1)           <-------MYC3 <----------DOF2             <---------ETT(1)           ------->MYC3 <---------DAG2          <----------DOF2   <--------P       <------NtERF2 ----   gcaatgcgaaacacgtttttcaccaactttatgcgaaacctttgcgactactttgcgacaacagactggttgtcgtcaaatagtcgccaaatatacgact  16753300                                 ------>MYB83                                 ------>MYB46(1)                              --------->DEAR3(2)                             <---------At5g28300                      <-----------TGA1                     --------->ETT(2)            ---------->DOF2 <-----------GT1                             --------->TOE2(3)        ----  <---------TOE2(3)  <---------bZIP60(1)        ------->TEIL            --------->TOE1(3)        <--- ---------->DOF2     --------->bZIP60(1)  <----------ID1               ----------->GT1   ------------ ----->MYB52(1)     ---------->ID1     ----------->HVH21              --------->ICU4   <xxxxxxxxxxxxx   aactaaagtagtcggaaagtttgtcgtcatttaccgactatttgacgacgaatttctctctacagaaatgtaatcgttaaatagtcgtccatttacgact  16753400                                                                       ----------->GT1                                                                    --------->MYB52(2)                                                                  <---------MYB52(1)                                                                 --------->TOE2(3)                                                                --------->ANAC58                                                                --------->ANAC58                                                               --------->SPL7    ------>NtERF2                                              <---------TOE1(2)   --------->DEAR3(1)                                          <---------TOE2(2)  --------->ORA47(2)                                        <---------ANAC58                 -------- ----->ARR14(2)                                             <---------ANAC58        <------NtERF2 ------ARR14(2)                                            <---------------AtSPL3  ------>NtERF2 --------->WRI1            --------->ZAT18            <-----------RAV1(1)       <-----------HVH21 xxxxxxxxsmallRNA(fl3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<---------SPL7 xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   attcgccgactaacttatttagtcgtaagtggacgactacttcacgactaattttcatgttgtcgtacgttagtcgtaacaacgtcgcctagttgtcgca  16753500  Previous    Next  AGI:  At1g44070.1    Description:  transposable element gene. CACTA-like transposase family (Tnp2/En/Spm), has a 2.6e-142 P-value blast match to GB:CAA40555 TNP2 (CACTA-element) (Antirrhinum majus) Range:  from: 16749166    to: 16753020    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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