Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------ANAC58                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                   --------->ZAT6        <---------YAB1                                                                   <xxxxxxxxxxxxxxxxsmallRNA(i)<-----                                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                 xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                             --------->ANAC58     <-----------GT1                                                             --------->ANAC58  <----------DOF2 <-----                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                             xxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-----                              --------->LBD16                xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<-----                             <---------ANAC55(2)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <---------ARR14(2)                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<-----                          --------->ARR14(2)                 <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<------                         --------->GLK1(1)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                         <---------GLK1(1)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <----------DOF2<---------RAP2.6(3)           <----------DOF2<xxxxxxxxxxxxxxxxsmallRNA(s) <---------HSFB2a(2)  --------->RAP2.6(2)    <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->HSFB2a(2) <xxxxxxxxxxxxxxxxsmallRNA(i) ------->TEILxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------ANAC58   --------->ALFIN1      --------->ATHB12     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---- ------ANAC58   <---------REM1(1)   ------->TEIL <---------CCA1(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   cttctccaagctttgatggtgtagccgaaatccgtatgaatctttggctttgtatcttttaacaaggaaacactacttaggcttttacattttgcttgcg  14489400                                                                --------->HSFB2a(1)                                                               ------>MYB46(1)                                                               -------->P                                                               ------>MYB83                                                              xxxxxxxxxxxxxxxx>smallRNA(s)                                                             ------->GAMYB                                                            <---------MYB55(2)                                                            <---------MYB52(2)                                                            --------->MYB46(3)                                                           -------->P                                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                      --------->ZAT6          --------->ANAC58                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----RAP2.6(2)                                 <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)               ------ ----ANAC58 --------->TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->ANAC58<------ ----ANAC58 --------->ANAC55(2)                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <----------DOF2 ----RAP2.3(2)            ----------->HVH21    <xxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxxxxxxxxxxxxxxx>smallRNA(s) ----RAP2.3(3)    --------->YAB1       --------->ICU4<xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(i) ---LBD16 <---------YAB1--------->ANAC46       <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------->DOF2 -----RAP2.3(1)  <---------ATHB12    --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <------   gctctagttgttatacttaatcatacacatgacatctagtcatatttgactccaaaacactaaccaaccttcttcttggtactcaaagctttgatggtgt  14489500                                                                            <-----------ARR10                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                 --------->ARR14(1)                                                                 --------->CCA1(2)                                                                --------->ARR11(3)              -----                                                                --------->ARR14(2)             <-----                                                                <---------ARR14(2)     <xxxxxxxxxxxxx        --------->TOE1(2)                                       --------->AGP1         <xxxxxxxxxxxxx      <-------TEIL                                              <---------ARR11(3)     <xxxxxxxxxxxxx --->ZAT14                                                     <xxxxxxxxxxxxxxxxsmallRNA(i)  -------- ---REM1(1)                                  --------->ZAT6   <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ANAC46 ---ANAC46             <----------DOF2---------->DOF2    <----------DOF2<---------LBD16<xxxxxxxxxxxxx   agtcgaagttcatacgagtgtttggctttgtttcttctaacaaagaaacactacttagccttttaagatccgattgcggttctaagtcttatactcaatc  14489600                                          <---------HSFC1(2)                                          --------->HSFC1(2)                                         ------>MYB46(1)                                         ------>MYB83        --------->ARR11(3)             xxxxxxxxxxxxxxxx>smallRNA(i)        <---------ARR11(3)            --------->MYB46(3)       --------->GLK1(1)             -------->P      <---------ARR11(3)        --------->ZAT6 ---->YAB1                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                < ----ATHB12      --------->ICU4<xxxxxxxxxxxxxxxxsmallRNA(i)                                         < xxxxxxxxxsmallRNA(i2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       --------->ZAT14             x xxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <---------REM1(1)            x xxxxxxxxxsmallRNA(l2)   <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <----------DOF2               <------- ->WOX13(1)    --------->YAB1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <---------ANAC46      -------- xxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->DOF2            --------->TOE1(2)   atacacatgatatctagtcatatttgactccaaaacactaaccaagcttcttcttgtactcaaagctttaatggtgtagtcgaatttcatacgagtattt  14489700                                          <------ZmHOX2a(2)                                          --------->CCA1(2)                                          --------->ARR14(1)                                         --------->ARR14(2)                      <xxxxxxxxxxxxxxxxsmallRNA(i)                    xxxxxxxxxxxxxxxxx>smallRNA(si3)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                --------->ANAC58         --------->ARR11(3)                xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                --------->ANAC58  <----------DOF2                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        --------->YAB1            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                          <---------ATHB12            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     --------->WOX13(1)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    ------------>CBF <xxxxxxxxxxxxxxx          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)------>ZmHOX2a(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)     <---------ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(s)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     ------->TEILxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(i)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------CCA1(2) --------->ZAT6     <---------ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ARR11(1)   <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)------- ----------DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           <---------YAB1     ----------->HVH21 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------ARR14(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------GLK1(1)  <---------ARR11(3)  --------->ANAC46    <- --ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<-----------RAV1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ->ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       >>>>>>>ZML2--------->ANAC46 *TSS    ---------   ggctttgtatcttctaacaaggaaacactacttaggctttgaagatccgaatgttgttctagttcttatactcaatcatacacatgacatctagtcatat  14489800                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                         <----------DOF2                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    ---------->DOF2                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   --------->HSFC1(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   <---------HSFC1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  --------->ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               <xxxxxxxxxxxxxx            --------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                --------->MYB52(1) xxxxxxxxsmallRNA(le3)<-------TEIL<---------HSFB2a(2)                       <-------GAMYB -->ICU4  --------->TOE2(3)   <---------ANAC58                             <---------MYB46(3)<xxxxxxx ----------GT1    --------->ANAC58--------->HSFB2a(2)          <---------SPL7<---------WOX13(1)    xx >YAB1    --------->TOE1(3)   <---------ANAC58          ---------->DOF2 <----------DOF2   <xxxxxxxxxx   ttgactccctaacattaaacaagcttcgtcttgcttctcaaagctttgatggtttagccaaagtctgtacgagtctttggttgacgaacagaatcaacaa  14489900                                           ------>NtERF2                                          <---------ATERF1(2)                                          --------->DEAR3(1)                                          --------->RAP2.3(3)                                          --------->ATERF1(2)                                       ==================HOX2a_HOX2a                                       ------>ZmHOX2a(2)                                   ----------->HVH21                                  ------->PIF5                                  ------->MYC2                                  ------->MYC3                                  <-------MYC2                                  <-------PIF5                                 <---------TGA1a                                 --------->bZIP60(2)                                 --------->ANAC46                                 --------->ANAC55(2)                                 <---------O2                                 <---------ANAC55(2)       <xxxxxxxxxxxxxxxxsmallRNA(s)                                 --------->O2        --------->ANAC58                                 =============================bZIP_DOF           xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<------NtERF2<---------GLK1(1)                --------->HSFB2a(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->ANAC58               xxxxxxxxxxxxxxxxx          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ---------->DOF2                 --------->MYB46(3)         ----------->RAV1(1)   <---------ALFIN1<---------At4g35610          --------->LBD16      ------>NtERF2          ------->TEIL--------->RAP2.3(1) <---------ANAC58      <xxxxxxxxxxxxxxxxx    xxxxxxxxxxxxxxxx>smallRNA(i) --------->TGA1a  <------ZmHOX2a(1)        --------->HSFB2a(2)   <--- xxxxxxxsmallRNA(fl3)      <-------TEIL====================================HOX2a_HOX2a    <---------HSFB2a(2) xxxxxxxxxsmallRNA(i)   <---------At4g35610<---------RAP2.6(3)             <---------HSFB2a(2) <xxxxx xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<-------MYC3 --------->At4g35610  ------>ZmHOX2a(1)  xxxxxxxxxxxxxx xxxxxxxxxxsmallRNA(fl3)--------->At4g35610<-----------HVH21 <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxx   aatggccctgccaacattggtgctggagatgcaccacgtgatcgccgtcagaggaaaggaattgcgactcctgctatccagaacaacaacttcgagatta  14490000                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           --------->ANAC46                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <---------ALFIN1                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      <-----------ARR10                                                      --------->ARR11(3)                                                      <---------ARR11(3)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                     <------ZmHOX2a(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                <---------ATHB12 --------->AtMYB61                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxx>smallRNA(se3)                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxsmallRNA(i2)     --------->LBD16         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------YAB1    <---------YAB1xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ALFIN1                   - xxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxsmallRNA(s) --------->MYB46(3)                <<< xxxxxxxx>smallRNA(si3)<------ZmHOX2a(1)     <xxxxxxxxxxxxxxxxsmallRNA(i)                       ----- xxsmallRNA(si3)    <-----------RAV1(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 -------   agagtggtctcatctcgatgattcaggagaacaaattccatggtctgccaatggaggatccactcgaccaccttgatgaattcgataggctctacaacct  14490100                                                                            <---------HSFB2a(2)                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                ---------->DOF2                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                              <------NtERF2 --------->HSFB2a(2)                                                             =========================RAV           <                                                             ------>NtERF2 xxxxxxxxxxxxxxxx>smallRNA(s)     <------ZmHOX2a(2)                                       ----------->RAV1(1)             <xxxxxxx    --------->ARR11(3)                                       xxxxxxxxxxxxxxxx>smallRNA(s)<-----------GT1    <---------ARR11(3)                      <-----------GT1 <----------ID1----------->RAV1(2)<xxxxxxx   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->MYB52(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <x xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------MYB46(3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxx --------->DOF2                        <---------MYB52(1)   ----------->HVH21         --------->GLK1(2) <<<<GRF7   <---------bZIP60(1)      <---------ANAC46    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxx ------>HVH21                    <---------ZAT2          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxx ---->RAV1(2)<-----------HVH21   --------->ZAT2         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxx   gacaaagatcaatggtgtcagtgaagatggattcaagctccgtttgttccccttctccttgggcgacaaagcacacatctgggagaagaatttgccccat  14490200                  --------->ATHB12                 --------->ICU4                 <---------YAB1           --------->TOE1(2)          --------->ZAT2          ----------->RAV1(2)          <---------ZAT2         <xxxxxxxxxxxxxxxxsmallRNA(s)         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------ALFIN1     --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->MYB46(3)    <---------ATHB12                                                                  ------>ZmHOX2a(2)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                 <------ZmHOX2a(2)  --------->WOX13(1)<---------WOX13(1)                        --------->ARR14(2)     <---------GLK1(1) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <---------ARR14(2)    <---------ARR11(3) xxxxxxxxxsmallRNA(i)                        --------->ARR11(3)          <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxsmallRNA(si3)               <---------ARR11(3)     <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     ---------->DOF2 xxxxxxxxxxxxxxxx>smallRNA(s)--------->GLK1(1) xxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->YAB1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxsmallRNA(se3)<----------DOF2 xxxxxxxxxxxxxxxx>smallRNA(i)        --------->ARR11(3) xxxxxxxxxsmallRNA(s)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxx>smallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxsmallRNA(s)   gactcaatcaccacctgggatgattgcaagaaggcttttctatcaaagttcttctccaatgccagaactgcaagactcagaaatgagatctctggtttct  14490300  Previous    Next  AGI:  At1g38440.1    Description:  transposable element gene. gypsy-like retrotransposon family (Athila), has a 6.0e-121 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana) Range:  from: 14489784    to: 14490806    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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