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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AtMYB61
------>
NtERF2
<xxxxxxxxxxxxxxxxxxxxx
--------->
ANAC46
<---------
ETT(1)
----------->
HVH21
--------->
DEAR3(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
ZAT14
<---------
LBD16
<---------
ANAC58
--------->
PCF5
--------->
ALFIN1
------>
MYB46(1)
<---------
ANAC58
<---------
ATERF1(1)
--------->
LBD16
<-----------------
AGL1
--------->
REM1(2)
<-----------
HVH21
<---------
ANAC46
--------
<----------
DOF2
<----------
DOF2
--------->
ATHB12
<---------
ANAC46
------>
MYB83
<---
-->
ARR14(2)
<----------
DOF2
<---------
ZAT14
<---------
DEAR3(2)
<---------
ANAC58
<----------
---
ARR14(2)
------>
ZmHOX2a(1)
-------->
P
--------->
ICU4
<-----------
RAV1(1)
----------->
RAV1(1)
ctcatgggcctttcctcctttgggcctttcttacctgtgtagtaatccttggccggtcccgagcccatggtgcgggatccgacaccaacaattagccccc
13495500
--------->
ANAC55(2)
----------
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC46
--------->
ANAC58
<-----------
GT1
--------->
LBD16
------>
NtERF2
<---------
LBD16
>>>>>>>>>>
E2Fb
xx
smallRNA(i2)
------>
NtERF2
<-----------
GT1
->
DEAR3(1)
<----------
ID1
--------->
GLK1(1)
<
------
ALFIN1
--------->
ZAT18
<---------
GLK1(1)
<-------
-
GT1
<----------
DOF2
--------->
ICU4
<-----------
GT1
--------->
ANAC46
=
caagtctttcgaagtgatactccaatttggaagactttaatgctctaagggaaaagattgcgccaaataactctctgatttcccgcccaaatcacgttat
13495600
<-----------
GT1
--------->
YAB1
<-----------
HVH21
<---------
At4g35610
<---------
ARR14(2)
----------->
HVH21
<---------
YAB1
--------->
TGA1a
<---------
ATHB51
--------->
LBD16
<---------
TGA1a
--------->
ICU4
<---------
YAB1
->
GT1
<---------
LBD16
--------->
O2
--------->
ICU4
<---------
CCA1(2)
---------->
DOF2
<------
----------
DOF2
<---------
O2
------------>
CBF
<---------
YAB1
<---------
ARR14(2)
--
MYB52(1)
------------>
CBF
--------->
At4g35610
--------->
ARR14(2)
=========================
=======================================
bZIP_DOF
<---------
ICU4
<-----------
GT1
--------->
ARR14(2)
ttctttgatttcggaatcaactacaattactctcgtgacatctgtcacaattatgaccgtatatcgcttatttactattaaagcggggaaactcttccac
13495700
<---------
YAB1
--------->
ARR14(2)
<---------
MYB46(3)
<---------
DEAR3(2)
--------->
At5g28300
<---------
ALFIN1
<---------
ICU4
----------->
GT1
--------->
ANAC46
--------->
YAB1
--------->
SPL7
--------->
ANAC58
======================
MYC_MYB
<---------
SPL7
--------->
ANAC46
--------->
TGA1a
<---------
ARR14(2)
<---------
ANAC58
--------->
ANAC58
--------->
O2
<---------
RAP2.6(2)
<---------
ANAC58
<----------
DOF2
--------->
ANAC58
--------->
ICU4
<---------
ANAC55(1)
<-----------
GT1
--------->
ANAC58
<---------
YAB1
<---------
ANAC46
<---------
ANAC58
<---------
ALFIN1
<-------
GAMYB
<---------
ANAC58
<----------
DOF2
<-----------
GT1
<----
---
ALFIN1
<---------
DEAR3(1)
<---------
ANAC46
<-------
TEIL
<---------
ANAC58
<---------
==============
bZIP_DOF
<-----------
TGA1
<---------
ANAC58
<-----------
GT1
<---------
DAG2
<---------
DAG2
ttcccccacgactcccaaggcggtttcgtcatcatcactggcttgcgtatggtaaattcattttactctttccttgttacttttcacgcttcacttttct
13495800
------------>
CBF
--------->
TOE1(3)
<---------
TOE1(1)
---------->
DOF2
<<<<<<<<<
TBF1
--------->
TOE2(3)
<---------
TOE2(1)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
DAG2
<---------
ARR14(2)
------
DOF2
<<<<<<<<<
TBF1
------->
TEIL
<---------
ZAT14
---------->
DOF2
<---------
ALFIN1
-
DOF2
<----------
DOF2
<----------
DOF2
--------->
ZAT14
<---------
GLK1(1)
--------->
ARR14(2)
tttagagcaaagtccctttcttcttcttctctttgaaccttcaatctcttcactctttgtacg
atgaattctgaaaatgaaaggcctgaatccccatctt
13495900
--------->
ZAT14
<---------
ZAT14
<-------
TEIL
<-------
PIF4
------->
PIF4
<-------
MYC3
------->
MYC3
<-------
MYC2
------->
MYC2
<-------
PIF5
<-------
MYC4
------->
PIF5
------>
MYB83
--------->
ANAC46
------>
MYB46(1)
--------->
AtMYB61
>>>>>>>
ZML2
<---------
MYB59
--------->
HSFB2a(2)
<---------
MYB46(2)
<---------
HSFB2a(2)
<---------
MYB111(1)
------>
ZmHOX2a(2)
<---------
MYB111(2)
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
ZAT18
<---------
GLK1(1)
--------->
PCF2
================================
<---------
AGP1
<---------
ICU4
--------->
PCF5
<---------
O2
<-----------
ARR10
--------->
ATERF1(1)
------->
MYC4
<---------
ARR11(3)
--------->
ARR11(3)
--------->
MYB46(3)
--------->
ARR11(3)
------>
NtERF2
<-----------
HVH21
--------->
O2
<---------
ARR14(3)
--------->
LBD16
<---------
ATERF1(1)
<---------
TGA1a
--------->
ARR14(3)
--------->
MYB46(3)
<---------
DEAR3(2)
--------->
TGA1a
--------->
TOE2(3)
<---------
ARR14(2)
<---------
LBD16
--------->
DEAR3(1)
<------------
OsbHLH66
--------
--------->
ARR14(2)
<----------
DOF2
--------->
YAB1
<---------
ALFIN1
--------->
ZAT18
<---------
MYB52(1)
tcgaagatctcggttctagtaatgacctttgcacccggccaaatgatatcgccggtccccactaccaaaccacgtgcactcttcaatcccttaatcgatt
13496000
--------->
LBD16
<---------
ATHB12
<-----------
HVH21
<---------
ZAT14
<---------
SPL7
--------->
ZAT18
--------->
DEAR3(1)
--------->
ATERF1(1)
<---------
ALFIN1
--------->
GLK1(2)
------>
NtERF2
--------->
AtMYB61
--------->
ARR14(2)
--------->
PCF2
<---------
ABI4(2)
<---------
ARR14(2)
<---------
ATERF1(1)
--------->
MYB46(3)
<---------
GLK1(2)
<------
NtERF2
<---------
PCF5
<---------
ANAC46
--------->
ETT(1)
--------->
ATERF1(1)
<------
ZmHOX2a(1)
<----------
DOF2
<----------
DOF2
---------->
DOF2
--------->
LBD16
--------->
LBD16
<---------
LBD16
--------->
ARR11(3)
<---------
YAB1
<---------
ATERF1(1)
--------->
SPL7
<---------
TOE1(2)
<---------
ARR11(3)
<---------
ANAC46
<---------
At4g35610
<---------
LBD16
<---------
ANAC46
===============
bZIP_DOF
--------->
GLK1(2)
<---------
LBD16
--------->
MYB52(1)
--------->
LBD16
->
ATHB12
---------->
ID1
--------->
ICU4
--------->
At4g35610
--------->
MYB46(3)
<---------
LBD16
gggagagctttgtcggattctggctgagattatgaaagactcgcagatgccggagcccactgaatcaccggaggaccaccgtcccgggttcttttgtgta
13496100
<---------
RAP2.6(2)
<---------
ANAC46
<---------
ANAC58
--------->
LBD16
<---------
ANAC58
--------->
LBD16
------>
ZmHOX2a(2)
--------->
HSFB2a(2)
--------->
CCA1(2)
<---------
HSFB2a(2)
<------
ZmHOX2a(2)
<---------
LBD16
--------->
ARR11(3)
<-----------
GT1
<---------
ICU4
<--------
--------->
AGP1
<--------
P
---------->
ID1
--------->
ICU4
<---------
ATHB12
<---------
ARR11(3)
<----------
DOF2
--------->
ATERF1(1)
<---------
MYB52(2)
--------->
ARR14(2)
<---------
DAG2
------>
NtERF2
<---------
ANAC55(2)
<---------
ANAC58
<---------
ARR14(2)
<-----------
GT1
--------->
ANAC46
--------->
ANAC55(2)
<---------
ANAC58
aacgagatctacttcaagggttgcggtttgacttttccccttcccggagccctcgttcgatacttattagccctcgaaattgccttgccccaattaaccc
13496200
<---------
GLK1(1)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
LBD16
--------->
SPL7
<------
NtERF2
<---------
LBD16
<------
NtERF2
<---------
RAP2.6(2)
<---------
DEAR3(1)
----
<---------
LBD16
--------->
GLK1(1)
--------->
LBD16
<---
<-----------
GT1
--------->
RAP2.6(2)
--------->
HSFB2a(2)
<----
<---------
YAB1
--------->
ATERF1(1)
<---------
HSFB2a(2)
-----
<xxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<---------
GLK1(1)
--------->
ALFIN1
<---------
YAB1
<---------
YAB1
<---------
LBD16
--------->
GLK1(1)
<---------
ANAC58
--------->
LBD16
<---------
ICU4
<---------
ANAC46
--------->
At4g35610
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
ICU4
------>
NtERF2
<-----------
HVH21
<---------
ANAC46
---
GT1
<---------
LBD16
<---------
YAB1
--------->
At4g35610
<---------
At4g35610
------->
TEIL
<------
ZmHOX2a(1)
ctaacctcctccggactattctagggattattactatcgcggcggaagccggatatgtcatcggagttcccgaactgaatgaacttcttagcgtgaggag
13496300
------->
TEIL
<---------
GLK1(2)
--------->
ANAC58
--------->
ANAC58
----------->
RAV1(1)
--------->
GLK1(1)
<---------
ARR11(3)
--------->
ALFIN1
<---------
GLK1(1)
--------->
ARR14(2)
<----------
ID1
<-
--------->
DAG2
<---------
MYB52(1)
<---------
ARR14(2)
---------->
DOF2
<------
---------->
DOF2
<-------
GAMYB
------>
NtERF2
<---------
ICU4
--------
----->
ARR11(3)
<---------
HSFC1(2)
--------->
ANAC46
--------------->
AGL15
---------
------
ARR11(3)
--------->
HSFC1(2)
--------->
ANAC58
--------->
HSFB2a(1)
<---------
ALFIN1
-----
GLK1(1)
--------->
ARR14(2)
--------->
ANAC58
<---------
CCA1(2)
--------->
bZIP60(1)
---->
GLK1(1)
<---------
ARR14(2)
--------->
SPL7
--------->
TOE2(3)
------>
ZmHOX2a(1)
<---------
bZIP60(1)
ttcttcgaagaaagtgggatacttctcggttatccgaacgccaacaagaacctcatctcgcatcttcctaataaagacgagaactggcatcacccgtggt
13496400
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AGI:
At1g36100.1
Description:
myosin heavy chain-related. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT5G32590.1); similar to hypothetical protein 26.t00052 [Brassica oleracea] (GB:ABD65035.1)
Range:
from: 13495864
to: 13496427
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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