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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                 --------->AtMYB61
                                                                               ------>NtERF2
                                                                              <xxxxxxxxxxxxxxxxxxxxx
                                                                           --------->ANAC46
                                                                           <---------ETT(1)
                                                                           ----------->HVH21
                                                                          --------->DEAR3(2)
                                                                          ------>ZmHOX2a(2)
                                                                         <------ZmHOX2a(2)
                                                                        <---------ARR14(2)
                                                                        --------->ARR14(2)
                                                                    <---------ANAC58
                                  --------->ZAT14                  <---------LBD16
                         <---------ANAC58           --------->PCF5--------->ALFIN1 ------>MYB46(1)
                         <---------ANAC58         <---------ATERF1(1)--------->LBD16
         <-----------------AGL1   --------->REM1(2)<-----------HVH21<---------ANAC46        --------
      <----------DOF2 <----------DOF2     --------->ATHB12        <---------ANAC46 ------>MYB83 <---
-->ARR14(2)   <----------DOF2     <---------ZAT14 <---------DEAR3(2)<---------ANAC58     <----------
---ARR14(2)------>ZmHOX2a(1)-------->P   --------->ICU4        <-----------RAV1(1)----------->RAV1(1)
 
ctcatgggcctttcctcctttgggcctttcttacctgtgtagtaatccttggccggtcccgagcccatggtgcgggatccgacaccaacaattagccccc  13495500
                                                                                          --------->ANAC55(2)
                                                                                          ----------
                                                                                          --------->ANAC58
                                                                                          <---------ANAC55(2)
                                                                                          --------->ANAC46
                                                                                          --------->ANAC58
                                                                                        <-----------GT1
                                                                                --------->LBD16
                                                                                ------>NtERF2
                                                                              <---------LBD16
                                                                             >>>>>>>>>>E2Fb
xxsmallRNA(i2)                                           ------>NtERF2      <-----------GT1
->DEAR3(1)                                              <----------ID1    --------->GLK1(1)        <
------ALFIN1                                           --------->ZAT18    <---------GLK1(1) <-------
-GT1                           <----------DOF2    --------->ICU4<-----------GT1--------->ANAC46    =
 
caagtctttcgaagtgatactccaatttggaagactttaatgctctaagggaaaagattgcgccaaataactctctgatttcccgcccaaatcacgttat  13495600
                                                  <-----------GT1
                                               --------->YAB1
                                       <-----------HVH21
                                    <---------At4g35610 <---------ARR14(2)
                               ----------->HVH21 <---------YAB1
                             --------->TGA1a  <---------ATHB51                  --------->LBD16
                             <---------TGA1a  --------->ICU4             <---------YAB1
->GT1 <---------LBD16        --------->O2  --------->ICU4<---------CCA1(2) ---------->DOF2   <------
----------DOF2               <---------O2 ------------>CBF            <---------YAB1<---------ARR14(2)
--MYB52(1)        ------------>CBF  --------->At4g35610 --------->ARR14(2) =========================
=======================================bZIP_DOF<---------ICU4       <-----------GT1 --------->ARR14(2)
 
ttctttgatttcggaatcaactacaattactctcgtgacatctgtcacaattatgaccgtatatcgcttatttactattaaagcggggaaactcttccac  13495700
                              <---------YAB1
                   --------->ARR14(2)
                 <---------MYB46(3)
                 <---------DEAR3(2)            --------->At5g28300
     <---------ALFIN1       <---------ICU4    ----------->GT1
    --------->ANAC46        --------->YAB1  --------->SPL7                        --------->ANAC58
    ======================MYC_MYB         <---------SPL7                          --------->ANAC46
    --------->TGA1a<---------ARR14(2)    <---------ANAC58                         --------->ANAC58
    --------->O2<---------RAP2.6(2)  <---------ANAC58                       <----------DOF2
    --------->ANAC58       --------->ICU4<---------ANAC55(1)             <-----------GT1
    --------->ANAC58       <---------YAB1<---------ANAC46           <---------ANAC58
  <---------ALFIN1<-------GAMYB      <---------ANAC58           <----------DOF2 <-----------GT1<----
---ALFIN1       <---------DEAR3(1)   <---------ANAC46<-------TEIL   <---------ANAC58      <---------
==============bZIP_DOF <-----------TGA1  <---------ANAC58  <-----------GT1  <---------DAG2<---------DAG2
 
ttcccccacgactcccaaggcggtttcgtcatcatcactggcttgcgtatggtaaattcattttactctttccttgttacttttcacgcttcacttttct  13495800
                                    ------------>CBF
                                  --------->TOE1(3)      <---------TOE1(1)
    ---------->DOF2 <<<<<<<<<TBF1 --------->TOE2(3)      <---------TOE2(1)
  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------DAG2                      <---------ARR14(2)
------DOF2       <<<<<<<<<TBF1  ------->TEIL <---------ZAT14               ---------->DOF2<---------ALFIN1
-DOF2       <----------DOF2<----------DOF2   --------->ZAT14   <---------GLK1(1)     --------->ARR14(2)
 
tttagagcaaagtccctttcttcttcttctctttgaaccttcaatctcttcactctttgtacgatgaattctgaaaatgaaaggcctgaatccccatctt  13495900
                                                                       --------->ZAT14
                                                                       <---------ZAT14
                                                                       <-------TEIL
                                                                     <-------PIF4
                                                                     ------->PIF4
                                                                     <-------MYC3
                                                                     ------->MYC3
                                                                     <-------MYC2
                                                                     ------->MYC2
                                                                     <-------PIF5
                                                                     <-------MYC4
                                                                     ------->PIF5
                                                               ------>MYB83
                                                               --------->ANAC46
                                                               ------>MYB46(1)
                                                             --------->AtMYB61
            >>>>>>>ZML2                                      <---------MYB59
            --------->HSFB2a(2)                              <---------MYB46(2)
            <---------HSFB2a(2)                              <---------MYB111(1)
    ------>ZmHOX2a(2)                                        <---------MYB111(2)
   <------ZmHOX2a(2)                                   --------->ANAC46<---------ZAT18
   <---------GLK1(1)                                --------->PCF2  ================================
  <---------AGP1<---------ICU4                     --------->PCF5   <---------O2
  <-----------ARR10                               --------->ATERF1(1)------->MYC4
  <---------ARR11(3)                     --------->ARR11(3)  --------->MYB46(3)
  --------->ARR11(3)             ------>NtERF2    <-----------HVH21 --------->O2
  <---------ARR14(3)            --------->LBD16  <---------ATERF1(1)<---------TGA1a
  --------->ARR14(3)          --------->MYB46(3) <---------DEAR3(2) --------->TGA1a  --------->TOE2(3)
  <---------ARR14(2)          <---------LBD16   --------->DEAR3(1)<------------OsbHLH66     --------
  --------->ARR14(2)   <----------DOF2  --------->YAB1 <---------ALFIN1--------->ZAT18<---------MYB52(1)
 
tcgaagatctcggttctagtaatgacctttgcacccggccaaatgatatcgccggtccccactaccaaaccacgtgcactcttcaatcccttaatcgatt  13496000
                                                                                 --------->LBD16
                                                        <---------ATHB12    <-----------HVH21
                                                    <---------ZAT14         <---------SPL7
                                                    --------->ZAT18        --------->DEAR3(1)
                                                   --------->ATERF1(1)  <---------ALFIN1
             --------->GLK1(2)                    ------>NtERF2         --------->AtMYB61
            --------->ARR14(2)                    --------->PCF2       <---------ABI4(2)
            <---------ARR14(2)                    <---------ATERF1(1)  --------->MYB46(3)
            <---------GLK1(2)                   <------NtERF2        <---------PCF5       <---------ANAC46
         --------->ETT(1)                       --------->ATERF1(1)  <------ZmHOX2a(1) <----------DOF2
    <----------DOF2           ---------->DOF2  --------->LBD16   --------->LBD16<---------LBD16
 --------->ARR11(3)         <---------YAB1     <---------ATERF1(1) --------->SPL7<---------TOE1(2)
 <---------ARR11(3)<---------ANAC46      <---------At4g35610   <---------LBD16  <---------ANAC46
===============bZIP_DOF  --------->GLK1(2)   <---------LBD16  --------->MYB52(1)--------->LBD16
->ATHB12---------->ID1   --------->ICU4  --------->At4g35610--------->MYB46(3) <---------LBD16
 
gggagagctttgtcggattctggctgagattatgaaagactcgcagatgccggagcccactgaatcaccggaggaccaccgtcccgggttcttttgtgta  13496100
                   <---------RAP2.6(2)
                   <---------ANAC46
                   <---------ANAC58      --------->LBD16
                   <---------ANAC58     --------->LBD16
    ------>ZmHOX2a(2)                  --------->HSFB2a(2)
   --------->CCA1(2)                   <---------HSFB2a(2)
   <------ZmHOX2a(2)                   <---------LBD16
  --------->ARR11(3)            <-----------GT1             <---------ICU4                 <--------
  --------->AGP1<--------P     ---------->ID1              --------->ICU4                <---------ATHB12
  <---------ARR11(3)        <----------DOF2  --------->ATERF1(1)                         <---------MYB52(2)
  --------->ARR14(2)        <---------DAG2  ------>NtERF2 <---------ANAC55(2)  <---------ANAC58
  <---------ARR14(2)     <-----------GT1--------->ANAC46  --------->ANAC55(2)  <---------ANAC58
 
aacgagatctacttcaagggttgcggtttgacttttccccttcccggagccctcgttcgatacttattagccctcgaaattgccttgccccaattaaccc  13496200
                                                 <---------GLK1(1)
                                                --------->ARR14(2)
                                                <---------ARR14(2)
                                              --------->LBD16
                                         --------->SPL7
                                        <------NtERF2
                                     <---------LBD16
                                     <------NtERF2
                                   <---------RAP2.6(2)
                                   <---------DEAR3(1)                                           ----
                                  <---------LBD16--------->GLK1(1)--------->LBD16               <---
                           <-----------GT1   --------->RAP2.6(2) --------->HSFB2a(2)           <----
                          <---------YAB1--------->ATERF1(1)      <---------HSFB2a(2)           -----
                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------GLK1(1)           --------->ALFIN1
              <---------YAB1 <---------YAB1 <---------LBD16  --------->GLK1(1)         <---------ANAC58
        --------->LBD16 <---------ICU4<---------ANAC46  --------->At4g35610            <---------ANAC58
     ------>ZmHOX2a(1) --------->ICU4------>NtERF2  <-----------HVH21                  <---------ANAC46
---GT1<---------LBD16  <---------YAB1--------->At4g35610<---------At4g35610   ------->TEIL   <------ZmHOX2a(1)
 
ctaacctcctccggactattctagggattattactatcgcggcggaagccggatatgtcatcggagttcccgaactgaatgaacttcttagcgtgaggag  13496300
                                             ------->TEIL
                                            <---------GLK1(2)
                                          --------->ANAC58
                                          --------->ANAC58
                                      ----------->RAV1(1)
                          --------->GLK1(1) <---------ARR11(3)
          --------->ALFIN1<---------GLK1(1) --------->ARR14(2)        <----------ID1              <-
       --------->DAG2    <---------MYB52(1) <---------ARR14(2)      ---------->DOF2          <------
      ---------->DOF2   <-------GAMYB ------>NtERF2                 <---------ICU4          --------
----->ARR11(3)  <---------HSFC1(2)--------->ANAC46             --------------->AGL15       ---------
------ARR11(3)  --------->HSFC1(2)--------->ANAC58        --------->HSFB2a(1)         <---------ALFIN1
-----GLK1(1)  --------->ARR14(2)  --------->ANAC58      <---------CCA1(2)          --------->bZIP60(1)
---->GLK1(1)  <---------ARR14(2) --------->SPL7--------->TOE2(3)------>ZmHOX2a(1)  <---------bZIP60(1)
 
ttcttcgaagaaagtgggatacttctcggttatccgaacgccaacaagaacctcatctcgcatcttcctaataaagacgagaactggcatcacccgtggt  13496400
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AGI:  At1g36100.1   
Description:  myosin heavy chain-related. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT5G32590.1); similar to hypothetical protein 26.t00052 [Brassica oleracea] (GB:ABD65035.1)
Range:  from: 13495864    to: 13496427    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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