Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ANAC55(2)                                                                    --------->ANAC58                                                                    --------->ANAC58                                                             --------->LBD16                                                           <---------LBD16                                                       --------->ALFIN1                 <xxxxxxxxxxxxxxxxsmallRNA(s)          <---------MYB46(3)               <-------MYC3                        <---------TOE1(3)--------->ANAC46               ------->MYC3                        <---------TOE2(3)----------->GT1        >>>>>>>>>>E2Fd                            <---------At5g28300        >>>>>>>>>>E2Fa            --------->HSFB2a(2)  <-----------RAV1(1)        >>>>>>>>>>E2Fc            <---------HSFB2a(2)<-------GAMYB  --------->ANAC55(1)        >>>>>>>>>>E2Fe  <---------TOE1(3)      <----------DOF2<------NtERF2--------->AHL20(2)       --------->LBD16  <---------TOE2(3)    <------MYB83--------->ALFIN1 --------->YAB1      <---------LBD16  <---------At5g28300   <------MYB46(1)<---------ANAC46       <---------AHL20(2)     <---------LBD16<----------DOF2          <---------MYB46(3)     --------->ANAC55(2) -DOF2<---------ANAC46<-----------GT1    <-----------RAV1(1)----------->GT1<---------AHL20(2)     ---   tgattttagcgggaaaacgtggttttacggttttgtcgagaaaatgttggtttacggttgtggcggaaaaacgtaattttaatatttaaaccaaaaactg  13451000                                                                                           --------->TOE2(3)                                                    <---------AHL20(2)       <---------AHL20(2)                                                   <---------AHL20(2)        --------->AHL20(2)                            <------ZmHOX2a(1)      --------->AHL20(2)       <---------AHL20(2)           --------->ATHB51 <---------ICU4     >>>>>>>>>>GT-3b              --------->AHL20(1)   ----           --------->AHL20(2)             ---------->DOF2                   --------->AHL20(2)   <--- --------->AHL20(2)       <---------TOE1(3) <----------ID1                  <---------AHL20(1)  ----- -------->GT1             <---------TOE2(3) ----------->GT1   --------->ATHB12             --------->TOE1(3)   aagttaaatagaataatttagttttactaaggatgactaatagaaaaagaaaaataaatagacttaattggataccaatttatttatgtgaaaccttatt  13451100                                                                    <----------ID1                                                              <---------AHL20(2)                                                              --------->AHL20(2)                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                         <---------AHL20(1)                                                         <---------AHL20(2)           --------->MYB52(2)                            --------->AHL20(2) --------->AHL20(2)                                      --------->AHL20(1) <---------AHL20(2)         <---------AHL20(2)          --------->AHL20(2)                        --- ----->AHL20(2)            --------->AHL20(2)       ------>ZmHOX2a(1)                             <-- ------AHL20(2)  <---------ANAC58                  --------->TOE2(3)----------->GT1           ------- ---->AHL20(2)   <---------ANAC58      <-----------GT1  <---------AHL20(2)           --------->YAB1<-   taataaatgagtttagttggcttaatccatttaatctcatttaacttgtttttcctaaattaatttaaatgggtcaaaaactcttactcataaccattaa  13451200               --------->ANAC58           <---------ANAC58           <---------ANAC58       --------->GLK1(1)                                                         --------------------      <---------ARR14(2)                                                       <-----------GT1     <-      --------->ARR14(2)                                                    <---------ICU4         --     <------ZmHOX2a(1)                                                <-----------GT1             --- ------>AHL20(2)                     ------>ZmHOX2a(1)             <---------AHL20(2)          ------ -------AHL20(2)                     <---------HSFB2a(2)        <---------AHL20(1)             <----- -->AHL20(2)   --------->ANAC58      --------->HSFB2a(2)        <---------ARR11(3)<---------DAG2<---- --------AHL20(2)      <-----------GT1                          --------->AHL20(1)<----------DOF2 ---   ttaaataggatttgcatacccaaattaacatcactagtcctagacaaaaaccaaaatagaaaacaatatttttatccatttttacttttgctcatcgacc  13451300 ->WRI1                                                               --------->DOF5.7(2) --------ARR14(2)                ---------->DOF2                    <---------ANAC46 ------->ARR14(2)           <------------CBF                     --------->bZIP60(1)               -- --->MYB46(1)            ------------>CBF                        <---------bZIP60(1)        <------NtERF2 ----------->AGL1       --------->MYB52(1)                       <---------O2            --------->RAP2.6(3) ------------AGL1   --------->ANAC46                             --------->O2        ---------->DOF2 -----MYB59         --------->ANAC58                        --------->MYB52(1) ---------->DOF2     -- --->MYB83          --------->ANAC58                     --------->YAB1     --------->YAB1<----------ID1   aaatttgggcctagtttgctacaagctaacaattgaaaagcctcttaagacacatgaaatagtaacgacgtcgtttactcatgaagcgaaagacggcaaa  13451400                                     ----------->HVH21              --------->WRKY12    <---------SPL7                      >>>>>>>>>TBF1              --------->WRKY38(1) <-----------HVH21                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              --------->ETT(2) ------>ZmHOX2a(1)                   >>>>>>>>>TBF1     >>>>>>>>>TBF1  <           <---------ANAC46   ------------------>SPL14            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <---------TOE2(3)   <---------ALFIN1                  >>>>>>>>>TBF1     >>>>>>>>>TBF1     < --------->MYB52(1)      --------->ANAC58                ----------->GT1 >>>>>>>>>TBF1              - ------->ANAC58    <-----------HVH21--------->SPL7      <---------DEAR3(1)  >>>>>>>>>TBF1           < ------->ANAC58 *TSS     --------->ANAC58  ----------->GT1--------->At5g28300  >>>>>>>>>TBF1    -----   cacgaacgggtttacgtagaccgtcaaacgctcctccgtccgacggagaaaaaacgagacggtgaagaagaagaagaagaagaagaagaagaacgactca  13451500                                    ------->TEIL                                 --------->ANAC58                                 --------->ANAC55(2)                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC55(1)                                <---------LBD16                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)          <------ZmHOX2a(2)    <-----------GT1                 ------>NtERF2  ------>ZmHOX2a(2)     <---------AGP1                        ----------->HVH21                     - <------ZmHOX2a(2)      --------->AGP1                        --------->DEAR3(1)                    - -----------ARR10       --------->ARR14(2)         <-----------GT1--------->HSFC1(2)                - ---------AGP1          --------->ARR11(3)       --------->HSFC1(2)                                -- -------->ARR11(3)      <-----------ARR10        <---------HSFC1(2)       =========================== ---------ARR11(3)      <---------ARR14(2)       --------->HSFB2a(1)      <---------TGA1a     <------ ----->DOF2             <---------ARR11(3)       <---------HSFB2a(1)      --------->TGA1a     -------   aagatctcatcgatcactctctccaagatctattcacgcatcgtcggaagaattttcgcttccgacgacgtttctctcgtctgattttgtctccgaacat  13451600                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                      ------>ZmHOX2a(2)          --------->ARR14(2)               <---------At4g35610                       <------ZmHOX2a(2)       --------->YAB1                     --------->GLK1(2)                         <---------ARR11(3)    ------>MYB46(1)                       ------->TEIL             ----------->GT1  --------->ARR14(3)    ------>MYB83                          <---------ARR14(2)      ----------->GT1   <---------ARR14(3)  <---------MYB59                    <---------At4g35610          --------->ALFIN1  --------->ARR14(2)  <---------MYB46(2)        <---------ARR14(2)               --------->LBD16        --------->ARR11(3)  <---------MYB111(1) --------->ARR14(2)  --------->ARR14(2)<---------HSFB2a(2)     <---------ARR14(2) ----->MYB83          <---------ARR14(2) <---------GLK1(2)  --------->LBD16       <------NtERF2 ----->MYB46(1)  <---------ZAT2      --------->At4g35610   <---------HSFB2a(2)   <------NtERF2      - ------->P<---------ARR14(2)--------->ARR14(2)             --------->HSFB2a(2)   --------->LBD16   <- ---->ZmHOX2a(1) --------->ZAT2    <---------ZAT14         <---------LBD16     <---------LBD16     -- ========MYC_MYB--------->ALFIN1   --------->ZAT14    <---------ANAC58         <---------ANAC46    <- ---HSFB2a(1) <---------ANAC58  --------->LBD16       <---------ANAC58    <---------ICU4    --------- -->HSFB2a(1) <---------ANAC58<---------LBD16----------->HVH21 <---------AtMYB61<---------LBD16   <--   cctacctaatcgtattcggtgctggatttgaatccggtgaactgaatctgacaatttcgttcccggaggtgtttaaaaatggccgggatcttgaataaat  13451700                             --------->YAB1                            <---------ATHB12                          --------->WOX13(1)   --------->GLK1(2)    <------ZmHOX2a(2)                   <------NtERF2  <---------ARR14(2)   --------->ARR11(3)      --------->SPL7 ->AHL20(2)        ------>ZmHOX2a(1)           <-------TEIL--------->LBD16 --AHL20(2)       --------->TOE1(2)         --------->RAP2.6(2)    --------->ZAT6 --AHL20(1)   <---------CCA1(2)            --------------->AtSPL3  <-----------GT1 ->AHL20(1)   <---------GLK1(1)   <---------RVE1(1)       <---------ANAC46 -------->LBD16<---------ARR14(2)<---------GLK1(2)       <---------LBD16 --------ANAC46--------->ARR14(2)--------->ARR11(3)     --------->LBD16                  ------------ ------->ANAC55(2)--------->TOE2(3)    <---------At5g28300<---------DEAR3(1)        <---------MYB52(1) --------ANAC55(2)--------->TOE2(2)   <-----------GT1  --------->ANAC46            <-------GAMYB >AHL20(2) <-------TEIL<---------ARR11(3)------------------>SPL14 <---------YAB1------>ZmHOX2a(1) -------LBD16 --------->GLK1(1)  <---------ARR11(3)   <---------LBD16      ------>ZmHOX2a(1)   tgcggaatctagatgcatatcctaagatcaatgaagatttttacagccgtacattatccggcggagttatcactctcctctcctccgttgttatgttcct  13451800                    --------->ANAC55(2)                    <---------ANAC55(2)                    --------->ANAC58                    --------->ANAC58                   <-------TEIL                   --------->SPL7                   ------->TEIL                  --------->SPL1(1)                  <---------SPL1(1)                                 --------->ANAC55(2)                 <---------SPL7                                     <---------ANAC55(2)                <---------ANAC46                                    ----------->GT1               --------------->AtSPL3                               <---------ANAC58               --------------->AtSPL8                      --------->ARR14(2)            --------->At4g35610                            <---------ARR14(2)                 <------            --------->ZAT2                                <---------CCA1(2)                  <-------GAMYB            <---------At4g35610                    ------->TEIL     <---------ANAC58        <--------            --------->GLK1(1)                      <---------ARR14(2)            --------->GLK1(2)            <---------ZAT2<-----------GT1          --------->ARR14(2)    --------->ICU4<------------- --->AtSPL8 <---------GLK1(1)           --------------->AGL15       <---------ANAC46<----------DOF2 -   tctcttcttctccgagctccgtacgtattaacaacttcgcttccaattttgtgaatctccatatccagtttcgtaattttgaaattctttgattctgttg  13451900  Previous    Next  AGI:  At1g36050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61738.1); contains InterPro domain Protein of unknown function DUF1692 (InterPro:IPR012936) Range:  from: 13451416    to: 13454467    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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