Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->GLK1(2)                                                          <--------ATHB1                                                          <---------ICU4                                                          --------->ATHB51        --------->ARR11(3)                                                          <---------AHL20(2)      <---------ARR11(3)                                                          --------->AHL20(2)  ------>ZmHOX2a(2)                                                         <---------ATHB51   --------->ARR11(3)                                                         <---------ATHB12   <---------ARR11(3)            ---------->DOF2                        --------->ZAT6     --------->ARR14(2)        --------->GLK1(2)                       =========================HOX2a_HOX2a        <---------ARR11(3)             ---------->DOF2   --------->ICU4 --------->YAB1    ------>ZmHOX2a(2)   <------ZmHOX2a(2)                 --------->ANAC46  --------->YAB1 <---------ARR14(2)--------->ARR11(3)  <---------ARR11(3)        ----------->GT1     <------ZmHOX2a(1) ------>ZmHOX2a(2) ------>ZmHOX2a(2)  --------->ARR11(3)     ---------->DOF2        =====================================HOX2a_HOX2a ------->DOF2       ----------->GT1<-----------GT1--------->GLK1(1)  <---------GLK1(2)  <---------ARR11(3)   aaaagatcaaaatctaaaggaatcgaaaaaaggaaatttacgaaagaagaggaactctaataatttgatcggaatcttgatcttgatcttgatcttcttc  13030700                                                                                            ---------                                                                                            <--------                                                                                            ------->GAMYB                                                                                           --------->MYB46(3)                                                                                          -------->P                                                                                       <------NtERF2                                                                                       --------->LBD16                                                                                       ------>NtERF2                                                                                      --------->RAP2.3(3)                                                                                      --------->RAP2.3(2)                                                                                      --------->RRTF1(3)                                                                                      --------->RRTF1(2)                ------>ZmHOX2a(2)                                                     --------->DEAR3(1)               <------ZmHOX2a(2)                                                      --------->RAP2.6(2)              --------->ARR11(3)                                                      --------->ANAC46              <---------ARR14(2)                                                      --------->ANAC58              --------->AGP1                                                          --------->ANAC58              <-----------ARR10                                                      <------NtERF2              <---------AGP1       ------>ZmHOX2a(2)                                ------>NtERF2 ---              --------->ARR14(2) --------->ARR11(3)          <---------ZAT2         --------->LBD16              <---------ARR11(3) <---------ARR11(3)          --------->ZAT2         <---------ATERF1(1)     --------->YAB1          ------>MYB46(1)        --------->ANAC58     <-------TEIL--------->RAP2.3(1)    <---------ATHB12         ------>MYB83   <---------ARR11(3)        --------->LBD16--------->RRTF1(1)    <<<<<<<<<ARR1           --------->MYB52(1)      --------->ANAC58<---------LBD16--------->ANAC46--    <<<<<<<<<ARR2   --------->MYB46(3)      --------->ARR11(3)<---------GLK1(2)   --------->MYB46(3)   accacaatcataaacagatctaaccaaaaccaactgatcttccaagtatctctgaagcaaaccagcttcttccggttcatcaaacccgccgcaaccacat  13030800                                                                                                <----                                                                                                <----                                                                                                <----                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             <------NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ------>NtERF2                                                                                           <---------DEAR3(1)                                                                                           <---------RAP2.3(2)                                                                                           --------->ANAC46                                                                                           <---------RAP2.3(3)                                                                                           <---------RRTF1(3)                                       --------->At5g28300                            ===============                                       <------NtERF2                                  ------>ZmHOX2a(2)                                      <---------DEAR3(2)                             <------ZmHOX2a(2)                                      <---------MYB46(3)                             ================                                     <---------DEAR3(1)                             --------->ARR14(3)                                     <---------DREB2C(2)                            <---------ARR14(3)                         --------->YAB1<-------GAMYB                                <---------ARR11(3)               <---------ARR14(2)   <------NtERF2                                   <---------AGP1               --------->ARR14(2)   <---------ABI4(1)       ----------->TGA1        <---------ARR14(2)             --------->LBD16      <---------DEAR3(1)      --------->YAB1            --------->ARR14(2) >AtMYB61   --------->ANAC46     <---------LBD16        <---------TOE2(3)           --------->ARR11(3) -ALFIN1   <---------LBD16 --------->At4g35610        --------->TOE1(2)         ---------->DOF2------ ------------------>WRI1<---------ATHB12   <---------ARR14(2)       <---------LBD16--------->RVE1(1) ---->ZmHOX2a(1)------>NtERF2    ------>ZmHOX2a(1)    --------->TOE2(2)  <---------ATERF1(1)<--------   ccttcttcacatctccggagcctcaaatcatcttcctcggcggtggatttagcaaaccaaggatgacgactacggagacgactaaagatctcgacggcgc  13030900  --------->ARR14(2)  <---------ARR14(2) <------ZmHOX2a(1) ------CDC5 -------RAV1(2) --NtERF2                                                                 <---------ANAC46 ---ANAC46                                                               <---------MYB52(1)         < ->ATERF1(1)                                                            <-----------HVH21           < ->RAP2.3(1)                                                          --------->ATERF1(1)          -- -RRTF1(1)                                                            <------NtERF2               <-- -DEAR4(2)                                                           <---------ATERF1(1)      <------ -ATERF1(1)                                                          ------>NtERF2           -------- -ERF1                                                         --------->MYB52(1)            <------- -RAP2.3(1)                                                 --------->ANAC46                 <------- =======HOX2a_HOX2a    <---------ARR14(2)                   --------->ANAC58                 -------- =======HOX2a_HOX2a    --------->ARR14(2)           ---------->DOF2 --------->ARR14(2)  ============= >NtERF2              <------ZmHOX2a(1)          <------ZmHOX2a(1)  <---------ARR14(2)  ---------->DOF2 -ORA47(2)       <-----------RAV1(2)       <---------ZAT14  --------->ANAC58    --------->ANAC46 <---   agaggattgggattgaggcacagaggattgggattagtaatggagaacagaggagaaagaaaacgaaacggctccgtcgtgtacgaagccaaaagacgtc  13031000                      <---------ANAC58                      <------NtERF2                      <---------ANAC46                      <---------ANAC58                     ------>NtERF2                    <---------ANAC46                   --------->ATERF1(1)                  <---------RAP2.3(1)                                      --------->ANAC58                  ------>NtERF2                                            --------->ANAC46                  <---------ATERF1(1)                                      --------->ANAC58                  <---------DEAR4(2)                                  <---------------AtSPL3                  <---------ERF1                                     <---------ANAC58                 <---------DEAR3(1)                                  <---------ANAC46                 <---------RAP2.3(2)                                 <---------ANAC58   --------->YAB1<---------RAP2.3(3)                               <---------TOE1(2) ---------WRKY12 <---------RRTF1(3)                                <---------TOE2(2) ---------WRKY38(1)<------NtERF2                                <---------ANAC58 ------->WRKY18(1)<---------RRTF1(1)                            <---------ANAC46 ------ZAP1   <---------bZIP60(1)                               <---------ANAC58 -----HVH21   --------->bZIP60(1)                              --------->ALFIN1 ->O2         ----------->HVH21      <---------ANAC58         ----------------------->TaNAC69(2) --O2 --------->MYB52(1) --------->REM1(2)                  <---------AtMYB61   --------->ANAC58 --TGA1a      <---------O2           <---------ANAC46      <------ZmHOX2a(1)    --------->ANAC58 ->TGA1a --------->YAB1 ----------->HVH21                --------->ALFIN1 --------->SPL7 ==bZIP_DOF----------->TGA1   <-----------HVH21     --------->ALFIN1 <-------GAMYB  <----------DOF2 ------DEAR3(2) --------->ATERF1(1)  <---------ANAC58 <------ZmHOX2a(1) <---------SPL7        -------   ggtcaacataatggtgacgacggcgcgtgaagagtcatggctggagtaaatggggaggagaggaggtcgtgggttgtacgacacgactttggtaaatgag  13031100                                                                                --------->At4g35610                                                                                --------->O2                         ------->MYC3                                           <---------At4g35610                         <-------MYC3                                           --------->TGA1a                 <----------DOF2                          <---------AHL20(2)    <---------TGA1a            --------->HSFC1(2)<----------DOF2         --------->AHL20(2)        <---------O2            <---------HSFC1(2)*TSS               =========================================bZIP_DOF            --------->HSFB2a(1)          <---------AHL20(2)                     --------->ANAC55(2)       <XXXXXXXXXXXXXXXXXXXXMIR399A  <----------DOF2<-----------TBP             <---------ANAC55(2)  <------ZmHOX2a(2)     <---------At4g35610      <---------DAG2             <-----------HVH21  ------ --------->ARR11(3)     --------->At4g35610   <-----------GT1        <------MYB83 ----------->HVH21 -->ATHB12  <---------HSFB2a(1)   ---------->ID1 <----------DOF2     <------MYB46(1)         <-------   tgggatcatggagaagcttctttggcacatgactttgttctttttatttgacttttttatatacttgtgtttggtttttgtcatgtgactgttttttact  13031200                                                             <---------YAB1                                                           --------->YAB1                                                          --------->ICU4                                                          <---------YAB1 <-----------GT1                                     ----------->GT1 --->ANAC55(2)         <---------MYB46(3)          ---------->DOF2             ---------->DOF2 ----GT1             <---------MYB52(1)           <------ZmHOX2a(1)  ---------->DOF2   tatttacaaaatttgataaatctgtttgttatatgagcaagaccagtttggaggaaagttattatgaaatacaaagagtcggaaagtacaagaacatttc  13031300                                              ---------->DOF2                <---------------AtSPL8   --------->ICU4             --------->MYB52(1)     <----------ARF1                                            ------          --------->At4g35610    ------>ZmHOX2a(1)         ---------->DOF2                     <-----         --------->ANAC58        --------->LBD16    ----------->GT1 XXXXXXXXXXXXXXXXXXX>MIR773B*  ---         --------->ANAC58       <---------LBD16<---------TOE2(3)----------->GT1               -------   tgaagacagataagctaacgagtacaaaaacattcctggagacaagattaaagaaggtaaacaaaggagaaaaaactcgagcaaacaaactacataatat  13031400              --------->ARR14(2)              --------->GLK1(2)          --------------->AGL15          --------->HSFB2a(2)          <---------HSFB2a(2)         ----------------->AGL2         <-----------------AGL1         <-----------------AG             <-----------GT1         ----------------->AGL1        <---------ICU4         <---------LBD16              --------->AHL20(2) --------->YAB1                      --------->AHL20(1) --->ARR11(3) <---------ARR14(2)     <---------ARR11(3)                <---------ARR14(2) --------->ANAC58 ----ARR11(3)<---------GLK1(2)       <---------AHL20(1)                --------->GLK1(2)  --------->ANAC58 ------>WOX13(1)--------->YAB1       --------->ARR11(3)                --------->ARR14(2) --------->ANAC46 -->CCA1(1)--------->LBD16        --------->AHL20(2)          --------->AHL20(2) --------->AtLEC2   ctatcaatatttcccgaatcggaatttagaaactcaaaaaatatttacaaaactaaaactaaaatttaaaacaaatctgagacatacaaaacacacaaac  13031500                                                          ----------->HVH21                                                         --------->SPL7                                                        --------->ALFIN1                                                       ------->MYC3                                                       ------->MYC2                                                       <-------MYC3                                                       ------->PIF4                                                       <-------PIF4                                                       <-------MYC2                                                       <-------MYC4                                                       <-------PIF5                                                       ------->MYC4                                                       --------->TOE1(2)                                                       ------->PIF5                                                      <---------ANAC58                                                      <---------ANAC46                                                      --------->ANAC55(2)                                                      <---------ANAC55(2)                                                      <---------ANAC58                         --------->YAB1               <---------O2                      <-----------GT1                 --------->TGA1a               --------->RVE1(1)                      <---------bZIP60(2)              --------->ARR11(3)                      --------->O2              --------->GLK1(2)                       <---------TGA1a              <---------ARR11(3)                     ------------>OsbHLH66             --------->RVE1(1)                    <-----------HVH21             --------->CCA1(1)              ---------->DOF2         ----------->GT1        --------->AtLEC2   <---------YAB1  <----------DOF2          ====================bZIP_DOF       --------->LBD16      - <-----------GT1   =============================================bZIP_DOF     <---------LBD16     <---   aaattacaatacaaaaaatctcttttaccataagttagaactgaatgaaagtagtcacgtgcgaccttcattgtaaaactccggagaagagccatggaga  13031600  Previous    Next  AGI:  At1g35430.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93332.1) Range:  from: 13030531    to: 13031130    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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