Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <------MYB46(1)                                                                      --------->MYB59                                                                      <---------AtMYB61                                                                      --------->MYB111(2)                                                                      --------->MYB46(2)                                                    <---------ALFIN1  <---------MYB46(3)                                                    --------->AtMYB61 --------------->AtSPL3              ------>ZmHOX2a(1)                     --------->DEAR3(1)<---------------AtSPL8       --------->AtMYB61                       <-----------HVH21      --------------->AtSPL8       <---------ALFIN1                        <-----------TGA1       <---------------AtSPL3     ------>NtERF2                            --------->ANAC46        --------->MYB111(1)    --------->DEAR3(1)                     --------->ARR14(2)        <--------P      <-------PIF5    <---------ALFIN1                       <---------ARR14(2) ----------->HVH21   <---------ALFIN1  ------>NtERF2                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<------MYB83  ------->PIF5  --------->LBD16                  <-------GAMYB   --------->MYB46(3)<---------MYB55(1)          <--- --------->ANAC46        <---------ICU4   <---------GLK1(1)   --------->ZAT14    --------->MYB46(3) ---------LBD16       --------->YAB1   <---------ANAC46       <---------ZAT14  --------->ANAC46  ---- ------>ARR14(2)      <---------ICU4  <---------LBD16        --------->ALFIN1 --------->MYB46(3)----- -------ARR14(2) <---------YAB1   <-----------RAV1(1)  --------->AtMYB61  <-------TEIL        <------   tttccgccaccacatccttcttattcattactgcctctgttgcggtatccgtcaccacctccagtggacgggttggtacatccaccacgggcttctccac  12566200                                       --------->YAB1                                  <---------TOE1(2)                             <-----------HVH21                                         --------->MYB52(1)                         <xxxxxxxxxxxxxxxxsmallRNA(s)                               --------->ANAC58                       ------->GAMYB  <-------TEIL                                  --------->ANAC58                      <---------MYB52(2)              <--------P       <xxxxxxxxxxxxxxxxsmallRNA(i) ------ALFIN1         --------->MYB46(3)  ---------->DOF2        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->DEAR3(1)  <---------REM1(1)--------->LBD16 <-----------RAV1(2)  xxxxxxxxxxxxxxxx>smallRNA(i) ---->ANAC46   ----------->GT1  <---------LBD16--------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---ALFIN1    --------->ALFIN1 --------->SPL7  --------->ANAC58<------ZmHOX2a(1) --------->WRKY18(1)   ccccttgagcaaataggtggtgtaacgaccgcgtcccgcgttcataaagaagccaggttgttttaggagaaaactagaccatggtcaagaaacggactaa  12566300                                              <---------ZAT2                                              <---------At4g35610                                              --------->At4g35610                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                         <---------ANAC55(2)                                         <---------ANAC46                         <------MYB83                                         <------MYB46(1)                          <------MYB46(1)                                        --------->MYB111(1)                   --------->ZAT2    -----                                        --------->MYB111(2)                   <---------ZAT2    <----                                        --------->MYB46(2)                   --------->ANAC58   -----                                        --------->MYB59                  <---------STY1(2)      -----                                       <---------MYB55(1)            --------->STY1(2) --------->At4g35610                             --------->TOE1(3)--------->ZAT2         <---------STY1(2) <---------At4g35610                        <---------REM1(1)<------MYB83               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   ---------->DOF2    <---------MYB52(1)    <------ZmHOX2a(1)--------->ANAC58   <----   aatacttagtcggaagaacgagaaagttgaagcttaaccagttaggtgagctggacaaactaggatgaactagctagctaagctaggtgagctaaaccag  12566400                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                           <---------WRKY38(1)                                                                                           <xxxxxxxxx                                                                                         <-----------HVH21                                                                                    <---------SPL7                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                   <---------MYB46(3)                                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                            ----------->RAV1(2)------                             --------->MYB52(1)                             xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            --------->WRKY38(1)                             xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            --------->WRKY12                     --------->ZAT14  <---------AtMYB61                            ----------->HVH21                    <---------ZAT14  --------->ALFIN1---                     <------MYB83    --------->ZAT2              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                     <------MYB46(1) <---------ZAT2              --------->ZAT18<---------ANAC46xxxxx                    xxxxxxxxxxxxxxxx>smallRNA(s)               <---------------AtSPL3--------->PCF5xx                 --------->ZAT2  ----------->RAV1(1)          ------>ZmHOX2a(2)<---------MYB46(3) xxx            --------->ZAT2--------->ZAT2                      xxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxxx            --------->At4g35610 ----------->HVH21       <---------At4g35610 --------->ZAT2 <---------WRKY12        --------->STY1(2) --------->At4g35610  <---------At4g35610          <---------ZAT2 <---------        <---------STY1(2) <---------At4g35610  --------->At4g35610          <---------At4g35610xxxxxx ------>RAV1(2)  --------->At4g35610 <---------At4g35610<---------ZAT2    <-----------RAV1(2)<------- -----At4g35610  <---------At4g35610 --------->At4g35610--------->At4g35610 --------->At4g35610<xxxxx ---->At4g35610  <---------ZAT2 --------->DREB2C(2)   <---------ZAT14----------->HVH21--------->SPL7 ---->ZAT2  <---------ZAT2<---------ZAT2 --------->ATHB12 ----------->HVH21xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -----ZAT2  <---------At4g35610--------->DEAR3(2)     --------->ZAT18<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ctggaagactagctagctcagctaggtgagctgaccgacagctcgattgagcttagtgagctgatcgtgtactgacccagctgggtggtccggtcagctg  12566500                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                           --------->TGA1a                           <---------ANAC46           --------->ZAT18 --------->O2 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->ZAT14 <---------O2 <xxxxxxxxxxxxxxxxsmallRNA(i)        xxxxxxxxxxxxxxxx>smallRNA(s)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ZAT2   <---------At4g35610                                         <---------MYB46(3)     --------->ZAT2   --------->At4g35610                                      --------->MYB52(1)     <---------At4g35610   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 <---------SPL7  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ALFIN1                       ------->GAMYB xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --->RAV1(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ->At4g35610         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->MYB59   <---------MYB55(2) --ZAT2<---------MYB46(3)  <---------TGA1a             --------->ALFIN1      --------->MYB46(3) ->ZAT2--------->ALFIN1  --------->MYB52(1)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxsmallRNA(s) <--------P ----------->HVH21  ---------->DOF2            <---------MYB52(2) ----->HVH21        =================MYC_MYB   ----------------->AGL1       ------>MYB46(1) ------>ZAT6    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------REM1(1)    ------>MYB83 xxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->MYB52(1) xxxxxxxxxxxxxx>smallRNA(i)==================================bZIP_DOF     --------->TOE1(2) xxxxxxxxxxxxxxxxx>smallRNA(s2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->DEAR3(2)  -------- xxxxxxxxxxxsmallRNA(i) ----------->HVH21     ------>NtERF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --RAV1(2) <---------ZAT14<---------LBD16  xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------MYB46(3)    --------->DEAR3(1) --At4g35610   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->DAG2 <---------ANAC46    <---------AtLEC2 xxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ETT(2)------------>AtMYB77   acactcgagctggtggactgtggtagctcacgggtgaagaggtgtctcggccaaaaggtgtaaggtcgagcgggtaccaacgaacggttgcatcgcccaa  12566600                                                                      --------->MYB52(1)                                                                    <---------MYB52(2)        -------                                                   <---------DAG2  --------->ANAC58         <--------        --------->MYB52(1)             --------->MYB52(1)          --------->ANAC58         ---------      <---------MYB52(2)   ---------->DOF2      <-----------GT1  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     ----------->HVH21xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->ANAC58   --------->HSFB2a(2)   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <-------TEIL     --------->ANAC46   <---------HSFB2a(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <------ZmHOX2a(1)     --------->ANAC58<----------DOF2 <---------MYB52(2)--------->HSFB2a(2)       <---------YAB1  <-------TEIL      <---------DAG2  --------->ANAC58   <---------HSFB2a(2)    ----------->HVH21 ---->CBF       ----------->HVH21   --------->ANAC58<----------DOF2--------->ANAC46   <-----------RAV1(2)   tagatgcaaggaacggatgtgaccttttggaaagaggcaaggaacggatgtgacctttcggaagggtgcaaggaacggatgtgatgcttcaggatgcatc  12566700                      ------>NtERF2                     --------->ANAC58                     --------->ANAC58                     <xxxxxxxxxxxxxxxxsmallRNA(s)                   <------ZmHOX2a(1)         ----------->TBP       --------------->AGL15       <---------------AGL15                               <---------ATHB12      <-----------------AGL3                           ------------>CBF                           <--     ----------------->AGL3                        --------->At4g35610   --------->ANAC46       ----- >TEIL----------------->AGL3             --------->At4g35610        --------->ANAC46           <xxxxx -HSFC1(2)     <------ZmHOX2a(1)         <---------At4g35610--------->YAB1        --------->TOE2(3) >HSFC1(2)   <---------TOE2(3)  <----------DOF2    <---------At4g35610--------->ANAC46---------->DOF2   cattcgcccctatataaggaaggacgcccaaggcctttagggcatctcacatcatctcacaatcatccatacaccacaaaacattcttaaaagagtccca  12566800                                         ----------->GT1                                       <---------ANAC46                                <---------RAP2.3(1)                               <---------DEAR3(1)                               <-----------HVH21                             <---------ATERF1(1)                               --------->LBD16                            <---------SPL7                                    --------->LBD16                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            --------->ANAC58                  --------->ETT(1)--------->ARR14(2)              xxxxxxxxxxxxxxxx>smallRNA(i)               <------MYB83<---------ANAC58                     <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <------MYB46(1) <---------RAP2.3(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <           --------->MYB111(2)<---------At4g35610          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    -           <---------MYB46(3)--------->ALFIN1             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       -      --------->LBD16      <---------ANAC58             --------->MYB52(1)  ------>MYB46(1)        <x     --------->LBD16 ---------->DOF2<---------DEAR3(1)  ------>MYB46(1)     --------->MYB52(1)   <---    --------->HSFB2a(2)   --------->ALFIN1              ------>MYB83--------->ANAC58--------->MYB52(1)    <---------HSFB2a(2)   <---------DEAR3(1)  <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -- -------ALFIN1<---------AtMYB61<---------RAP2.6(2)     <---------ZAT14      ------>MYB83         <--- ------>RAV1(1)<---------MYB46(3) <---------ARR14(2)  <---------MYB59     --------->AtMYB61      <--- xxxxxxxxxxxsmallRNA(s)--------->DAG2 <------NtERF2  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxx   acacatcccgaagttgttggtcggaaagggggtgcggctcggcgagtataactcgaccgaactgatgcgcatgctacctcccggtccaacggtttgatgg  12566900                                                                        <------ZmHOX2a(2)                                                   <--------P          --------->ARR14(2)                                               ------>ZmHOX2a(2)       <---------ARR14(2)      <------ZmHOX2a(1)                       <------ZmHOX2a(2)    <------ZmHOX2a(2)              ---    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ARR14(2)   <---------ARR14(2)             <---    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------AGP1       --------->ARR14(2)            <----  xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        --------->ARR11(3)  xxxxxxxxxxxxxxxx>smallRNA(i)   ----- ---------ZAT14                              --------->ARR14(2) <---------DEAR3(2)           -------- -------->ZAT14           <xxxxxxxxxxxxxxxxsmallRNA(i)      ------>ZmHOX2a(2)                -------- -------->REM1(2)        --------->SPL7 --------->GLK1(2)  <------ZmHOX2a(2)              <---------SPL7 xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->ARR14(2)--------->ARR14(2)              ----------- ------ANAC58           <---------MYB52(1)  <---------CCA1(2)<-----------HVH21         --------->TOE1(2) ------->ALFIN1       <---------HSFB2a(1)   <---------ARR14(1) <---------TOE1(2)      xxxxxxxxxxxxxxx ------ANAC58     --------->ETT(2)      ------->TEIL--------->ETT(2)------>ZmHOX2a(2) ------>ZmHOX2a(2) ------ANAC46    <--------P             <---------ARR14(2)<---------ARR14(2)         <------ZmHOX2a(2) xxxxxxxxxxxxxxx>smallRNA(i2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------ARR14(2)   agtgtagaggatggagagggtagaccgttcgtcttagagacgaatcggatctggtagaccgatcgtcggatcggatcagccagaccgatcgtgggacgga  12567000                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          --------->MYB52(1)                                                                       --------->ANAC55(2)                                                                       --------->ANAC58                                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                                <xxxxxxxxxxxxxxxxsmallRNA(i)   <-----------HVH21                                                <-------GAMYB          --------->ANAC58                                               <---------DEAR3(2)      --------->ANAC46        ----------->HVH21          <-----------HVH21                ----------->HVH21              <-        <---------SPL7            ------>ZmHOX2a(2)                 <---------SPL7                <--   ------>ZmHOX2a(2)             <------ZmHOX2a(2)                  <xxxxxxxxxxxxxxxxsmallRNA(s)  <--  <------ZmHOX2a(2)             --------->ARR14(2)              ------>ZmHOX2a(2)              <xxxxx --------->ARR14(2)            <xxxxxxxxxxxxxxxxsmallRNA(i)    <xxxxxxxxxxxxxxxxsmallRNA(s)    <----- <---------ARR14(2)      --------->DEAR3(2)    <---------SPL7  <------ZmHOX2a(2)              ------>ZmHOX2a(2) --->ZmHOX2a(2)       ----------->HVH21        <---------MYB46(3) --------->At4g35610        <------ZmHOX2a(2) ---ZmHOX2a(2)       ------>ZmHOX2a(2)      <-----------HVH21 --------->ARR14(2)            --------- -----ARR14(2)     --------->ARR14(2) <---------SPL7          <---------ARR14(2)            <-------- ---->ARR14(2)     <---------ARR14(2) ----------->HVH21     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <-- ->ANAC58     <---------ARR14(2)<---------ARR14(2)  ----------->HVH21--------->MYB52(1)    <xxxxxxxxx ->ANAC58--------->MYB52(1)   xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxx >HVH21<-----------RAV1(2)xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(s)  --------->MYB46(3) x>smallRNA(s)--------->ARR14(2)<xxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----------->RAV1(2)--------->DEAR3(2)   tcggatcggccagacggattggatcggacagaccgatcgtcggacgggtcggatgggacaggccgatcgtctgacggaacgggtcgaacagaccgatcgt  12567100  Previous    Next  AGI:  At1g34400.1    Description:  unknown protein Range:  from: 12565970    to: 12566593    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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