Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------AHL20(2)                                                                         <---------AHL20(1)                                                                    ----------->GT1                                                                   <---------TOE2(3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                             ========================================                                                             --------------->AGL15                                                             <---------------AGL15                                                            --------------->AGL15                                                            <---------------AGL15       <---------RVE1(1)                                   <-----------------AGL3       <---------CCA1(1)                <---------YAB1     ----------------->AGL3      <---------AHL20(1)               <---------AHL20(2)  ----------------->AG                   <--      <---------ARR11(3)               --------->AHL20(1)  <-----------------AGL2             -------      --------->ARR11(3)               <---------AHL20(1)  <-----------------AG --------->ZAT6<------  ---------->DOF2                     --------->YAB1       ----------------->AGL1      --------->AHL20(2) ---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <-----------------AGL1      <---------AHL20(2) -------->AHL20(2)--------->AHL20(2) <---------YAB1        ========================================== ----GT1    <-----------GT1        <---------ZAT6        <-----------GT1 --------->ARR11(3)  -------- --GT1--------->AHL20(1)        ---------->ID1       <---------AHL20(2)  <---------ARR11(3)  <-------   atttaaaagatatttttcattttaaaattagtttgtagtattatatttgggtttttttatttccaatttagggtatatatttccactatttaaaattttt  12426400                                                                                                  <--                                                                                                  ---        <---------AHL20(2)                                                                --------->AHL20(2)       <---------AHL20(1)                                                              --------->AHL20(2)       --------->AHL20(2)                                                              <---------AHL20(2)       <---------AHL20(2)                                                             <---------AHL20(1)       --------->AHL20(1)                                        --------->YAB1       --------->AHL20(2) ===================================================================MADS_MADS     <---------AHL20(2) -------AHL20(2)                                <---------WOX13(1)                --------->AHL20(2) -->AHL20(2)                               <---------LBD16       --------->AHL20(2)   <---------AHL20(2) ---AHL20(2)                          <---------AHL20(2)   ----------->GT1       --------->AHL20(2) ===================================================================MADS_MADS --------->AHL20(2)<---- ->AHL20(2)                          <---------YAB1 <---------------AGL15    <---------YAB1   ------- --AHL20(2)                         --------->AHL20(2)     --------->YAB1<----------DOF2  <---------AHL20(2)   ttaattcaatttaatattagatttgtgtttgccctcatttttatttggggattgatacaaatggtaataaaaaaactttattatttaattaatttataaa  12426500                                                    --------->AHL20(2)                                                 --------->AHL20(2)                             <----                 <---------CCA1(1)          --------->ICU4                                --------->ANAC58                 <---------RVE1(1)          <---------YAB1                                --------->ANAC46        --------->AHL20(2)                --------->YAB1                                  <---------ALFIN1 ----ZmHOX2a(1) --------->ARR11(3)       <---------YAB1  ---------->DOF2          --------->WOX13(1) -------->GT1   <---------ARR11(3)      <-----------GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->LBD16 -----TOE2(3)  --------->YAB1          --------->YAB1 --------->YAB1  <-----------HVH21   --------->ANAC58 --->DOF2<---------AHL20(2)         --------->YAB1 --------->YAB1    <---------ZAT6      <---------LBD16   ggattaaaaattttatatgatatttttgaaagtttcaaaaattatcatttttaaaataataaagttttttagtgtcatttgtgtcaatccccccgcattt  12426600                                                                                          <---------MYB46(3)                                                                                          <---------DEAR3(2)                                                                                         <---------DEAR3(1)                                                                                       --------->MYB52(1)                                                                                      ------->GAMYB                                                                                      --------->ANAC46                                                                                     <------------AtMYB77                                              --------->TOE2(3)                      --------->DEAR3(2)                           --------->LBD16 <---------GLK1(2)                        <---------At5g28300          --------->At4g35610      <---------At4g35610               <---------KAN4(2)--------->DEAR3(1)         --------->GLK1(2) --------------->AGL15              <---------LBD16      <-----------GT1     --------->YAB1        <---------------AGL15 <-----------GT1--------->LBD16<----------DOF2------- -----AHL20(2)       <-----------GT1 ----------->HVH21  --------->YAB1 --------->YAB1--------->MYB46(3)   aatctattaataatctgacttattttctccccaatttagttgacatattcttaaccaattttaaaccggagtataatcaagcttttaaccgccggttcga  12426700                --------->WOX13(1)              ------------>CBF         <---------MYB52(1)             <-----------GT1         <---------MYB46(3)          --------->AHL20(1)     <---------ATHB12                                                 ---          <---------AHL20(1) ------------>CBF                                                   <----      --------->YAB1        ------>MYB83                   ----------->RAV1(2)                <------     <---------ATHB12       >>>>>>>>>>>>>>>>>LFY          ------>ZmHOX2a(1)                  --------   --------->WOX13(1)       ------>MYB46(1)      XXXXXXXXXXXXXXXXXXXX>MIR838                 -------- ------------>CBF          ------>ZmHOX2a(1)  <----------DOF2------>ZmHOX2a(1)               -------- ---->GT1 <---------ARR11(3)-------->P<-------GAMYB <<<<<<<<<TBF1           *TSS         --------->ATHB12   aaaaacaatcaatattttcaatctgtctcctaccaatggtcgttaagtcttttcttcttcctcctgcaacctcttcttccctctctcagtttgatttgac  12426800                                                       --------->ARR14(2)                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 <---------ARR14(2)         <---------ANAC58                        --------->AGP1         <---------ANAC46                        <---------AGP1        <---------LBD16                          --------->ARR11(3)   --------->ARR14(2)                            --------->ARR14(2)                                <-   <---------ARR14(2)         --------->LBD16    <---------ARR11(3)                                <- ------>LBD16        --------->YAB1             <---------CCA1(2)                        ----------->GT1 -----LBD16         <------ZmHOX2a(2)  <---------TOE2(2)                    <---------At4g35610   --- ---WRKY18(1) <---------SPL7<---------LBD16--------->ARR14(2)       <---------ANAC58     <------MYB46(1) ->WRKY12<---------ANAC58 <------ZmHOX2a(2)<---------ARR14(2)       <---------ANAC58     <------MYB83 ->WRKY38(1)--------------->AtSPL3--------->MYB52(1)  <---------CCA1(2)  <---------At4g35610      <-- --->HVH21 <------NtERF2 <-----------HVH21--------->GLK1(1)     <----------DOF2         --------->MYB59   cggagtatatggcggaagtacgatcacgatcacggagaacggaggtatccagatctatatcttctcctttgcttcttctgctcgtatagtttggttaaat  12426900                                                                                                    -                                                                                                    <                                                                             <---------ANAC58       -                                   <-----------RAV1(1)                  <----------DOF2             -                            ----------->GT1                           --------->At4g35610           -                            <---------ANAC55(2)                       <---------ZAT2    --------->AGP1                         <------ZmHOX2a(2)                            --------->ZAT2   --------->ZAT2       --------->LBD16  --------->ARR11(3)                            <---------At4g35610<----------DOF2 -----MYB83            ------->GAMYB                             <---------At4g35610   <---------At4g35610 -----MYB46(1)      <---------DOF5.7(2)                          --------->At4g35610   <---------ZAT2 ------>MYB59 <---------LBD16 ----------->HVH21              <-----------RAV1(1)       --------->At4g35610 -------TOE2(3)     --------->MYB52(1)                  --------->REM1(1)    <---------ANAC58    <---   taggttttccgaattttggggataacgatcatgtgaaatgttgcagagcaattgggctacaatatgctgctcagctttctcgtgtctccagctctactgg  12427000             --------->LBD16             --------->At5g28300           <---------LBD16                                                                     <----- -------->ANAC58                                                                               ------ ---------ANAC55(2)                                                                            <----- -------->ANAC55(1)                                     <---------YAB1                       <------- -------->ANAC55(2)                           <---------GLK1(2)                            <--------- -------->ANAC58   ----------->GT1         --------->YAB1     ----------->TGA1      <------ZmHOX2a(2) ------ZAT18--------->ANAC46     <---------At4g35610  <---------At4g35610          <---------ARR11(3)   gcacgtattgttctccgtaaatggttcaatgtttctgcttctgaatcagattatagtgctgatagtgacgatgactacgaagatagatcacaaggtcagc  12427100                         <------MYB46(1)                         <------MYB83                        --------->MYB59                    <---------ICU4                   <---------AHL20(2)                   --------->AHL20(2)                            --------->At4g35610             <---------HSFB2a(2)                           <------MYB83       <---------GLK1(2)<---------TOE2(3)                  <------MYB46(1)                         <-     <---------YAB1<---------ATHB51                        <---------ANAC46  ------>ZmHOX2a(2)     -- ----ZAT2    --------->ANAC46                    ------->TEIL<---------REM1(1)                     -- --->At4g35610     --------->ICU4                --------->ARR14(2)          ======================== ----At4g35610--------->LBD16                    <---------ARR14(2)   --------->GLK1(2)            -- --WRKY12    --------->HSFB2a(2)                 --------->GLK1(2)   <---------GLK1(2)        <------ --HVH21    <---------LBD16                     <---------GLK1(2)<---------At4g35610   <---------LBD16   ttaaactctgattctccggaaataattaggttttgtattctactgtgactgaatctgaatttggtgtagcagaatttgatccaattagctctggagttac  12427200                                                                         <-----------RAV1(1)   ------>ZmHOX2a(1)                                                  --------->ATHB12 --------ARR14(2)                                           --------->HSFC1(1) ---->MYB83                    --------->ANAC55(2)          <---------HSFB2a(2) ---->MYB46(1)  --------->MYB52(1)------->TEIL              --------->HSFB2a(2) =========HOX2a_HOX2a   ----------->GT1                     <---------HSFC1(1) ------->ARR14(2)   --------->At5g28300     --------->GLK1(1)  --------->YAB1                       < -----GT1      ----------->TGA1<---------ANAC55(2)   <---------YAB1   --------->YAB1        ---------   caatcctcgtgttgatactgacggtaatgtgatatgtaactctcagatttcaatttttatttctagaatcattcattgttgctaattttcggtgatgatg  12427300  Previous    Next  AGI:  At1g34120.1    Description:  IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I); inositol-polyphosphate 5-phosphatase. Identical to Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 (IP5P1) [Arabidopsis Thaliana] (GB:Q84MA2;GB:Q0WU22;GB:Q9FUR3;GB:Q9FX20;GB:Q9ZSC4); similar to inositol polyphosphate 5-phosphatase, putative [Arabidopsis thaliana] (TAIR:AT1G71710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15203.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 12426776    to: 12429673    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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