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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              <-----
                                                                                             ------>ZmHOX2a(2)
                                                                                            <------ZmHOX2a(2)
                                                                                           <--------
                                                                                           <--------
                  ----------->RAV1(1)                                                      ---------
               <---------ALFIN1                                                            <--------
              --------->ANAC46                                                             ---------
       --------->HSFC1(2)<---------At4g35610                                              <---------CCA1(2)
       <---------HSFC1(2)--------->At4g35610                                           <------ZmHOX2a(2)
       --------->ZAT2    --------->ZAT2                                               <---------ARR14(2)
       <---------At4g35610                                                            --------->ARR11(3)
       <---------HSFB2a(1)     ------->GAMYB                                          --------->ARR14(2)
       --------->HSFB2a(1)   -------->P                                  <----------DOF2------>ZmHOX2a(2)
       --------->At4g35610<---------MYB52(2)    --------->GLK1(2)        --------->TOE2(3)<---------ARR14(1)
 ---------->DOF2 --------->ANAC46        <---------YAB1                ------->TEIL   <---------ARR11(3)
------->CCA1(2)--------->AtMYB61    ------>ZmHOX2a(1)         <---------ARR11(3)  ---------->DOF2
 
gatacaaagcagcttccaccacaacaccagctaaccctcctgttatcagagactctgcaaaacaacatctaatgaactttaaaaacaaagatcggatctt  12400500
                                               --------->ANAC55(2)
                                               --------->ANAC55(1)
                                               <---------ANAC55(2)
                                               --------->ANAC58
                                               --------->ANAC58
                                           =============================HOX2a_HOX2a
     ---------->DOF2           --------->YAB1  --------->ANAC46
 --------->YAB1   --------->ARR11(3)       <------ZmHOX2a(1)     <------ZmHOX2a(2)
-----DOF2         <---------ARR14(2)    --------->DAG2     <---------ANAC46
-ARR11(3)         --------->GLK1(2)----------------->AGL1  <---------ANAC58
-ARR11(1)         <---------ARR11(3)   ---------->DOF2     <---------ANAC58
>ARR14(2)         --------->ARR14(2)--------->TOE2(3)      <---------AtLEC2
-ARR14(2)   <-------MYC3       --------->AtMYB61   --------->ANAC58      <---------ANAC58<---------At4g35610
>ARR11(3)   ------->MYC3      --------->MYB46(3)   --------->ANAC58      <---------ANAC58--------->At4g35610
 
tcaataacaaaagcacatgaaaatctgtttgcaaccataccataaaggacacgcaagaaatggcatggatcatcttgcttaacacagattgcagcacaac  12400600
                                                                            --------->ANAC58
                        --------->YAB1                         --------->ANAC46
                   <------ZmHOX2a(2)                           --------->ANAC55(1) --------------->AtSPL3
                  --------->ARR11(3)                        <-------TEIL    --------->ANAC58
                  <---------ARR11(3)                 <---------MYB52(2)     --------->ANAC46
            --------->ATHB12                        --------->ANAC58   ------>MYB46(1) <-------TEIL
   ------>ZmHOX2a(2)--------->ATHB12                --------->ANAC58   ------>MYB83<---------------AtSPL8
   =====================HOX2a_HOX2a                 --------->ANAC46--------->MYB46(3) ------->TEIL
 --------->ARR11(3)<---------YAB1                   --------->ANAC55(1)--------->ARR14(2)
 <---------AGP1  <------ZmHOX2a(1)      ---------->DOF2 >>>>>>>>>MYB98--------->WOX13(1)
 
tattgatctggttcttgataggatcattgatactcttgaatgctaaagcatctacaagtaacatacacataaccaatccacacaaaaacgtacatttagt  12400700
                                                               --------->ANAC46
                                                               --------->ANAC58
                                                               --------->ANAC58
                                <-----------------------TaNAC69(2)                                 <
       <---------ATHB12       --------->DAG2              --------->ANAC46              ----------->GT1
  <-----------GT1           ---------->DOF2             --------->ZAT6                 --------->ALFIN1
 
caatttttcaatctttctctaatggaagaacaaaaggcataaaaaatcaaacctttctaacactaaacgctactaaattcaattttagaggtgggaaatt  12400800
                                                                                            <-------
                                                                                     <---------YAB1
                                                                                 ----------->GT1
                                   --------->HSFB2a(2)                          ----------->GT1
   --------->ANAC46                <---------HSFB2a(2)                         --------->DAG2      >
-----------GT1       <------ZmHOX2a(2)         <-----------GT1               ---------->DOF2--------
 
tgttaccaggcattgctgtctgagatcgatctatgctactggaaacaatgtcactatccatctaaaaccatttaagaaacaaaaggttaaaattaagctg  12400900
                                                      ------>ZmHOX2a(2)
                                                    <---------ARR11(3)
                                                    --------->ARR14(2)
                                                    --------->AGP1
                                                    <---------ARR14(2)
                                          --------->At4g35610
                                      --------->TOE1(2)
                                     <---------TGA1a<---------AGP1
                                     <---------O2   --------->ARR11(3)
                   ----------->GT1   --------->O2<---------------------WRI1
                 --------->At4g35610 <---------ANAC58<------ZmHOX2a(2)
                 <---------At4g35610 --------->TGA1a<-----------ARR10
        <---------AHL20(2)           --------->ANAC55(2)
     <---------ARR11(3)   ---------->DOF2 <---------At4g35610
     --------->ARR11(3)   =====================bZIP_DOF                                 --------->ANAC58
--At4g35610    <------ZmHOX2a(1)     <---------ANAC58--------->CCA1(2)                  --------->ANAC58
>>>>>>>>TBF1<---------LBD16          <---------ANAC55(1)     <---------TOE2(3)       ------->GAMYB
->At4g35610 <-----------RAV1(2)      <---------ANAC55(2)  --------->MYB46(3)      ----------->RAV1(1)
 
aagaagaagatttattcaggagcagataataaagaaccatacgtgagaagacgaagatctaaccaaggtagagagactgagagagcaacagaagccagag  12401000
                                     <-----------GT1                                            <---
                                  <---------ICU4                                                ----
                                 --------->AHL20(1)                                         --------
                                 <---------AHL20(1)                                         <-------
                                --------->YAB1                                              --------
                          ----------->GT1                                                   <-------
                         --------->DAG2                                                    ---------
                   --------------->AGL15                      ------------>CBF             <--------
                   <---------------AGL15           --------->MYB52(1)             ------->TEIL -----
                  <-----------------AGL2           ------>MYB83        --------->LBD16 --------->AHL20(2)
                  <-----------------AGL1           ------>MYB46(1)    --------->LBD16  <---------AHL20(2)
     <-----------TGA1  ---------->DOF2           <---------MYB59     <---------LBD16----------->GT1
 <----------DOF2  <-----------------AG <---------YAB1       <-----------GT1  <---------AtLEC2  <----
 
agagctttcgtcataaacccttctctaaaaggcaaaaatattactattcaaaccgaaccgaaatcaccaattcccggtttggatgaatattaaaataaat  12401100
       --------->LBD16
      <---------LBD16
     <---------LBD16
    --------->MYB52(1)
------AHL20(2)
----->AHL20(2)
->AHL20(1)                                                          --------->MYB52(1)
--AHL20(2)                                                        <---------MYB52(2)
->AHL20(2)                   ----------->GT1                ------>MYB46(1)                        <
--AHL20(1)               <---------YAB1                     ------>MYB83                          <-
>AHL20(2)              --------->YAB1                      --------->WOX13(1)                     <-
-AHL20(2)  <------------CBF<------------CBF               --------->AtMYB61                     <---
---->AHL20(2)      <---------YAB1                   ------>ZmHOX2a(2)                     >>>>>>>>>SARD1
-----AHL20(2) <---------MYB46(3)        <------------CBF ------------>CBF------->TEIL     >>>>>>>>>CBP60g
 
taatacaaaccgggaattggttacgattagaattgtaaaaatagattgtagttgatctaaaccaatccaacttacgaacctagtgaattggaaatttggg  12401200
                  --------->GLK1(2)
                --------->KAN4(1)
   --------->AHL20(1)
   <---------AHL20(1)
   <---------ARR11(3)
   --------->ARR11(3)                         ------->GAMYB
------ZmHOX2a(1)<---------KAN4(1)       --------->AtMYB61
-----MYB83     <---------KAN4(2)        --------->TOE2(3)         --------->TOE2(3)
-----MYB46(1)--------->LBD16            --------->TOE1(3)       --------->ARR11(3)
-----P  <-----------GT1           --------->ANAC46   --------->AHL20(2)       --------->YAB1
 
taggaatatttttacccgaataatctaactcagaaaaacacaacctcaacccaaaaaaaaatagaaataccttgaaaacaaatataaactgactaaactt  12401300
                                                                                                 <--
       ----------->GT1 ----------->GT1                                   --------->YAB1       ------
--------->YAB1  ----------->GT1  --------->TOE2(3)   ----------->GT1 --------->MYB46(3)  -----------
 
caaatataacgagtaaaacttgaaaatagataatatccataaactattcgaaaaaatggcaaaacaaaatcaacaatcgcaattctaaaaattggtataa  12401400
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AGI:  At1g34065.1   
Description:  SAMC2 (S-adenosylmethionine carrier 2); binding. similar to SAMC1/SAMT1 (S-ADENOSYLMETHIONINE CARRIER 1), S-adenosylmethionine transmembrane transporter/ binding [Arabidopsis thaliana] (TAIR:AT4G39460.1); similar to S-adenosylmethionine transporter [Nicotiana benthamiana] (GB:CAF04055.2); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067)
Range:  from: 12398696    to: 12400861    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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