Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------        --------->HSFC1(2)                                                                  <--------        <---------At4g35610                                                                 ---------        --------->At4g35610                                                                <---------CCA1(2)        <---------HSFC1(2)                                                              <------ZmHOX2a(2)        <---------HSFB2a(1)   -------->P                                               <---------GATA12        --------->HSFB2a(1)<---------MYB52(2)                                          --------->GATA12        --------->ZAT2    <---------At4g35610                                          --------->ARR11(3)  ---------->DOF2         --------->At4g35610                                          --------->ARR14(2) ------->CCA1(2)          --------->ZAT2                                  --------->TOE2(3)<---------ARR14(1) ------>ARR11(2)   ----------->RAV1(1)                                    <----------DOF2------>ZmHOX2a(2) -------ARR11(2)  --------->ANAC46                                      ------->TEIL   <---------ARR14(2) -------RVE1(2) <---------ALFIN1          <---------YAB1       <---------ARR11(3)    --------->DOF5.7(1) --WOX13(2)     --------->AtMYB61    ------>ZmHOX2a(1)         --------->RVE1(2)   ---------->DOF2 ->WOX13(2)    --------->ANAC46 ------->GAMYB    --------->GLK1(2)  --------->WOX13(2) <---------ARR11(3)   gatacaaagcagcttccaccacaacaccagctaaccctcctgttatcagagactctgcaaaacaacatctaatgaactttaaaaacaaagatcggatctt  12400500      ---------->DOF2                           --------->ANAC55(2)  --------->YAB1                                --------->ANAC58 -----DOF2                                      --------->ANAC46 --KAN1                         --------->YAB1  --------->ANAC58  <------ZmHOX2a(2) -ARR11(3)         --------->GLK1(2)            --------->ANAC55(1) >ARR11(3)         <---------ARR11(3)           <---------ANAC55(2) -ARR14(2)         <---------ARR14(2)       <------ZmHOX2a(1)    <---------RVE1(2) >ARR11(2)         --------->RVE1(2)        =============================HOX2a_HOX2a -ARR11(1)         --------->GATA12      --------->DAG2     <---------ANAC46 >GATA12           --------->ARR14(2)   ---------->DOF2     <---------ANAC58 -GATA12           <---------GATA12 ----------------->AGL1  <---------ANAC58 -RVE1(2)          --------->ARR11(3)--------->TOE2(3)      <---------AtLEC2 -ARR11(2)   ------->MYC3       --------->AtMYB61   --------->ANAC58      <---------ANAC58<---------At4g35610 >ARR14(2)   <-------MYC3      --------->MYB46(3)   --------->ANAC58      <---------ANAC58--------->At4g35610   tcaataacaaaagcacatgaaaatctgtttgcaaccataccataaaggacacgcaagaaatggcatggatcatcttgcttaacacagattgcagcacaac  12400600                           --------->KAN1                          <---------RVE1(2)                         --------->YAB1                                      --------->ANAC46                     --------->YAB5                                          --------->ANAC58                    <---------YAB5                              --------->ANAC46                    <------ZmHOX2a(2)                           --------->ANAC55(1) <---------------AtSPL8             --------->ATHB12                                <-------TEIL    --------->ANAC58    =====================HOX2a_HOX2a                  <---------MYB52(2)--------->ARR11(2)    ------>ZmHOX2a(2)--------->ATHB12                --------->ANAC46   --------->ARR14(2)  <---------GATA12 <---------ARR11(3)                --------->ANAC55(1)------>MYB46(1) <-------TEIL  <---------AGP1  <------ZmHOX2a(1)                  --------->ANAC58   ------>MYB83--------------->AtSPL3  --------->ARR11(3)<---------YAB1                   --------->ANAC58--------->MYB46(3) ------->TEIL  <---------RVE1(2)--------->ARR11(3)    ---------->DOF2 >>>>>>>>>MYB98--------->WOX13(1)   tattgatctggttcttgataggatcattgatactcttgaatgctaaagcatctacaagtaacatacacataaccaatccacacaaaaacgtacatttagt  12400700                                          --------->RVE1(2)                                        --------->AHL12(1)                                        <---------AHL12(1)                                       <---------AHL12(2)       --------->ANAC46                                 <-----------------------TaNAC69(2)         <---------DOF5.7(1)   --------->DOF5.7(1)              --------->ANAC58        <---------ATHB12       --------->DAG2                   --------->ANAC58                    <   <-----------GT1            --------->DOF5.7(1)          --------->ANAC46              ----------->GT1 <---------AHL12(1)          ---------->DOF2             --------->ZAT6                 --------->ALFIN1   caatttttcaatctttctctaatggaagaacaaaaggcataaaaaatcaaacctttctaacactaaacgctactaaattcaattttagaggtgggaaatt  12400800                                                                                             --------                                                                                        <---------WOX13(2)                                    <---------HSFB2a(2)                                 --------->WOX13(2)                                    --------->HSFB2a(2)                               <---------YAB1                         <---------GATA12                                         ----------->GT1                         --------->GATA12                                        ----------->GT1                      <------ZmHOX2a(2)                                         --------->DOF5.7(1)    --------->ANAC46 --------->GATA12               --------->RVE1(2)           --------->DAG2      > -----------GT1      <---------GATA12           <-----------GT1               ---------->DOF2<-------   tgttaccaggcattgctgtctgagatcgatctatgctactggaaacaatgtcactatccatctaaaaccatttaagaaacaaaaggttaaaattaagctg  12400900                                                       ------>ZmHOX2a(2)                                                     --------->GATA12                                                     --------->RVE1(2)                                                     <---------GATA12                                                     <-----------ARR10                                                     --------->AGP1                                                     <---------ARR11(3)                                                     <---------AGP1                                                     --------->ARR11(3)                    ----------->GT1          --------->DOF5.7(1)                  --------->At4g35610  --------->TOE1(2)                  <---------At4g35610 <---------ANAC55(1)         --------->KAN1               --------->ANAC55(2)         <---------AHL20(2)           <---------TGA1a<---------ARR14(2)        <---------AHL12(1)            --------->TGA1a--------->ARR14(2)        --------->AHL25(3)            <---------O2  <---------KAN1        <---------AHL25(1)            <---------ANAC55(2)      --------->GATA12     =====================bZIP_DOF   --------->MYB46(3)      --------->ARR11(3)   ---------->DOF2 --------->At4g35610      <---------ARR11(3) <---------WOX13(2)<---------At4g35610<---------TOE2(3)          --------->ANAC58 ->At4g35610    <------ZmHOX2a(1)     <---------ANAC58--------->CCA1(2)                  --------->ANAC58 >>>>>>>>TBF1<-----------RAV1(2)      --------->O2<---------------------WRI1          ------->GAMYB --At4g35610 <---------LBD16          <---------ANAC58<------ZmHOX2a(2)            ----------->RAV1(1)   aagaagaagatttattcaggagcagataataaagaaccatacgtgagaagacgaagatctaaccaaggtagagagactgagagagcaacagaagccagag  12401000                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                      <-----------GT1                                        <-------                                   <---------AHL12(2)                                        --------                                   <---------ICU4                                            --------                                  <---------AHL12(1)                                         <-------                                  <---------AHL25(2)                                         --------                                  <---------AHL20(3)                                        <--------                                  --------->AHL20(3)                                        ---------                                  <---------AHL20(1)                                        <--------                                  --------->AHL20(1)                                        ---------                                  --------->AHL25(2)                                        <--------                                  --------->AHL25(3)                                        <--------                                  --------->AHL12(1)                                        ---------                                 --------->AHL12(3)                                         ---------                                 --------->YAB1                                             ---------                                 --------->AHL12(2)                                     --------->AHL25(1)                           ----------->GT1                                              <---------AHL20(2)                          --------->DAG2                       ------------>CBF         <---------AHL25(1)                         --------->DOF5.7(1)        --------->ARR11(2)                  --------->AHL20(2)                    --------------->AGL15           <---------ARR11(2)             ------->TEIL<-----                    <---------------AGL15           --------->MYB52(1)           --------->YAB5------                   <-----------------AGL1           ------>MYB83        --------->LBD16 --------->AHL20(3)                   <-----------------AGL2           ------>MYB46(1)    --------->LBD16  <---------AHL20(3)      <-----------TGA1  ---------->DOF2           <---------MYB59     <---------LBD16----------->GT1  <----------DOF2  <-----------------AG <---------YAB1       <-----------GT1  <---------AtLEC2<------   agagctttcgtcataaacccttctctaaaaggcaaaaatattactattcaaaccgaaccgaaatcaccaattcccggtttggatgaatattaaaataaat  12401100        --------->LBD16       <---------LBD16      <---------LBD16     --------->MYB52(1) ------AHL25(3) ----->AHL20(2) ------AHL25(1) ------AHL20(2) ---->AHL20(2) -----AHL20(3) -----AHL20(2) ---->AHL20(3) ---->AHL25(3) --->AHL12(2) ----WOX13(2) ->AHL20(2) --AHL20(3) --AHL12(3) --AHL20(2) ->AHL12(1) ->AHL25(1) --AHL12(1) --AHL25(3) ->AHL25(3) --AHL25(2) --AHL25(1) ->AHL25(2) ->AHL20(3) --AHL20(1) ->AHL20(1) -AHL12(1) >AHL20(2) -AHL20(2) >AHL25(1)                    ----------->GT1                ------>MYB83 -AHL25(1)                <---------YAB1                     --------->RVE1(2) -AHL12(3)              --------->YAB1                       ------>MYB46(1)                        < >AHL25(3)           --------->YAB5                         --------->WOX13(1)                     <- >AHL12(3)          <---------YAB1                         --------->AtMYB61                       <- >AHL12(1)       --------->ARR11(2)                  ------>ZmHOX2a(2)             <---------WOX13(2) ----AHL12(2)    <---------ARR11(2)                <---------GATA12  --------->MYB52(1)          <--- --->WOX13(2)  <---------MYB46(3)        <------------CBF ------------>CBF------->TEIL     >>>>>>>>>CBP60g ---AHL12(2)<------------CBF<------------CBF       --------->GATA12<---------MYB52(2)      >>>>>>>>>SARD1   taatacaaaccgggaattggttacgattagaattgtaaaaatagattgtagttgatctaaaccaatccaacttacgaacctagtgaattggaaatttggg  12401200                   --------->GLK1(2)                   --------->RVE1(2)                 --------->KAN4(1)     --------->AHL12(3)     <---------AHL12(2)     <---------AHL12(3)     --------->AHL25(2)    <---------AHL25(2)    <---------ARR11(3)    --------->ARR11(3)    --------->AHL25(2)    --------->AHL20(1)    <---------AHL12(1)    <---------AHL20(3)    --------->AHL12(2)                                <---------AHL20(3)    --------->AHL12(1)                                --------->AHL25(2)    --------->AHL20(3)                                --------->AHL20(3)    <---------AHL20(1)                                <---------AHL12(3)   --------->AHL12(1)                                 --------->AHL12(3)   <---------AHL12(1)                                 --------->AHL20(2)   <---------KAN1<---------KAN1                ------->GAMYB ------ZmHOX2a(1)<---------KAN4(1)       --------->TOE2(3)                      <---------AHL12(2) -----MYB83     <---------KAN4(2)        --------->AtMYB61         --------->TOE2(3) -----MYB46(1)--------->LBD16            --------->TOE1(3)       --------->ARR11(3)    --------->YAB5 -----P  <-----------GT1           --------->ANAC46   --------->AHL25(1)       --------->YAB1   taggaatatttttacccgaataatctaactcagaaaaacacaacctcaacccaaaaaaaaatagaaataccttgaaaacaaatataaactgactaaactt  12401300                                                                                                  ---                               --------->RVE1(2)                                                  <--          <---------KAN1  <---------RVE1(2)                      --------->RVE1(2)               <---        ----------->GT1 ----------->GT1           --------->DOF5.7(1)     --------->YAB1       ------ --------->YAB1  ----------->GT1  --------->TOE2(3)   ----------->GT1 --------->MYB46(3)  -----------   caaatataacgagtaaaacttgaaaatagataatatccataaactattcgaaaaaatggcaaaacaaaatcaacaatcgcaattctaaaaattggtataa  12401400  Previous    Next  AGI:  At1g34065.1    Description:  SAMC2 (S-adenosylmethionine carrier 2); binding. similar to SAMC1/SAMT1 (S-ADENOSYLMETHIONINE CARRIER 1), S-adenosylmethionine transmembrane transporter/ binding [Arabidopsis thaliana] (TAIR:AT4G39460.1); similar to S-adenosylmethionine transporter [Nicotiana benthamiana] (GB:CAF04055.2); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 12398696    to: 12400861    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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