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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-----
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<--------
<--------
----------->
RAV1(1)
---------
<---------
ALFIN1
<--------
--------->
ANAC46
---------
--------->
HSFC1(2)
<---------
At4g35610
<---------
CCA1(2)
<---------
HSFC1(2)
--------->
At4g35610
<------
ZmHOX2a(2)
--------->
ZAT2
--------->
ZAT2
<---------
ARR14(2)
<---------
At4g35610
--------->
ARR11(3)
<---------
HSFB2a(1)
------->
GAMYB
--------->
ARR14(2)
--------->
HSFB2a(1)
-------->
P
<----------
DOF2
------>
ZmHOX2a(2)
--------->
At4g35610
<---------
MYB52(2)
--------->
GLK1(2)
--------->
TOE2(3)
<---------
ARR14(1)
---------->
DOF2
--------->
ANAC46
<---------
YAB1
------->
TEIL
<---------
ARR11(3)
------->
CCA1(2)
--------->
AtMYB61
------>
ZmHOX2a(1)
<---------
ARR11(3)
---------->
DOF2
gatacaaagcagcttccaccacaacaccagctaaccctcctgttatcagagact
ctgcaaaacaacatctaatgaactttaaaaacaaagatcggatctt
12400500
--------->
ANAC55(2)
--------->
ANAC55(1)
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC58
=============================
HOX2a_HOX2a
---------->
DOF2
--------->
YAB1
--------->
ANAC46
--------->
YAB1
--------->
ARR11(3)
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
-----
DOF2
<---------
ARR14(2)
--------->
DAG2
<---------
ANAC46
-
ARR11(3)
--------->
GLK1(2)
----------------->
AGL1
<---------
ANAC58
-
ARR11(1)
<---------
ARR11(3)
---------->
DOF2
<---------
ANAC58
>
ARR14(2)
--------->
ARR14(2)
--------->
TOE2(3)
<---------
AtLEC2
-
ARR14(2)
<-------
MYC3
--------->
AtMYB61
--------->
ANAC58
<---------
ANAC58
<---------
At4g35610
>
ARR11(3)
------->
MYC3
--------->
MYB46(3)
--------->
ANAC58
<---------
ANAC58
--------->
At4g35610
tcaataacaaaagcacatgaaaatctgtttgcaaccatac
cataaaggacacgcaagaaatggcatggatcatcttgcttaacacagattgcagcacaac
12400600
--------->
ANAC58
--------->
YAB1
--------->
ANAC46
<------
ZmHOX2a(2)
--------->
ANAC55(1)
--------------->
AtSPL3
--------->
ARR11(3)
<-------
TEIL
--------->
ANAC58
<---------
ARR11(3)
<---------
MYB52(2)
--------->
ANAC46
--------->
ATHB12
--------->
ANAC58
------>
MYB46(1)
<-------
TEIL
------>
ZmHOX2a(2)
--------->
ATHB12
--------->
ANAC58
------>
MYB83
<---------------
AtSPL8
=====================
HOX2a_HOX2a
--------->
ANAC46
--------->
MYB46(3)
------->
TEIL
--------->
ARR11(3)
<---------
YAB1
--------->
ANAC55(1)
--------->
ARR14(2)
<---------
AGP1
<------
ZmHOX2a(1)
---------->
DOF2
>>>>>>>>>
MYB98
--------->
WOX13(1)
tattgatctggttcttgataggatcattgatactcttgaatgctaaagcat
ctacaagtaacatacacataaccaatccacacaaaaacgtacatttagt
12400700
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<-----------------------
TaNAC69(2)
<
<---------
ATHB12
--------->
DAG2
--------->
ANAC46
----------->
GT1
<-----------
GT1
---------->
DOF2
--------->
ZAT6
--------->
ALFIN1
caatttttcaatctttctctaatggaagaacaaaaggcataaaaaatcaaacctttctaacactaaacgctactaaattcaattttagaggtgggaaatt
12400800
<-------
<---------
YAB1
----------->
GT1
--------->
HSFB2a(2)
----------->
GT1
--------->
ANAC46
<---------
HSFB2a(2)
--------->
DAG2
>
-----------
GT1
<------
ZmHOX2a(2)
<-----------
GT1
---------->
DOF2
--------
tgttac
caggcattgctgtctgagatcgatctatgctactggaaacaatgtcactatccat
ctaaaaccatttaagaaacaaaaggttaaaattaagctg
12400900
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
AGP1
<---------
ARR14(2)
--------->
At4g35610
--------->
TOE1(2)
<---------
TGA1a
<---------
AGP1
<---------
O2
--------->
ARR11(3)
----------->
GT1
--------->
O2
<---------------------
WRI1
--------->
At4g35610
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
TGA1a
<-----------
ARR10
<---------
AHL20(2)
--------->
ANAC55(2)
<---------
ARR11(3)
---------->
DOF2
<---------
At4g35610
--------->
ARR11(3)
=====================
bZIP_DOF
--------->
ANAC58
--
At4g35610
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
CCA1(2)
--------->
ANAC58
>>>>>>>>
TBF1
<---------
LBD16
<---------
ANAC55(1)
<---------
TOE2(3)
------->
GAMYB
->
At4g35610
<-----------
RAV1(2)
<---------
ANAC55(2)
--------->
MYB46(3)
----------->
RAV1(1)
aagaagaagatttattcaggagcagataataaagaaccatacgtgagaagacgaagatctaaccaaggtagagagactgagagagcaacagaagccagag
12401000
<-----------
GT1
<---
<---------
ICU4
----
--------->
AHL20(1)
--------
<---------
AHL20(1)
<-------
--------->
YAB1
--------
----------->
GT1
<-------
--------->
DAG2
---------
--------------->
AGL15
------------>
CBF
<--------
<---------------
AGL15
--------->
MYB52(1)
------->
TEIL
-----
<-----------------
AGL2
------>
MYB83
--------->
LBD16
--------->
AHL20(2)
<-----------------
AGL1
------>
MYB46(1)
--------->
LBD16
<---------
AHL20(2)
<-----------
TGA1
---------->
DOF2
<---------
MYB59
<---------
LBD16
----------->
GT1
<----------
DOF2
<-----------------
AG
<---------
YAB1
<-----------
GT1
<---------
AtLEC2
<----
agagctttcgtcataaacccttctctaaaaggcaaaaatattactattcaaaccgaaccgaaatcaccaattcccggtttggatgaatattaaaataaat
12401100
--------->
LBD16
<---------
LBD16
<---------
LBD16
--------->
MYB52(1)
------
AHL20(2)
----->
AHL20(2)
->
AHL20(1)
--------->
MYB52(1)
--
AHL20(2)
<---------
MYB52(2)
->
AHL20(2)
----------->
GT1
------>
MYB46(1)
<
--
AHL20(1)
<---------
YAB1
------>
MYB83
<-
>
AHL20(2)
--------->
YAB1
--------->
WOX13(1)
<-
-
AHL20(2)
<------------
CBF
<------------
CBF
--------->
AtMYB61
<---
---->
AHL20(2)
<---------
YAB1
------>
ZmHOX2a(2)
>>>>>>>>>
SARD1
-----
AHL20(2)
<---------
MYB46(3)
<------------
CBF
------------>
CBF
------->
TEIL
>>>>>>>>>
CBP60g
taatacaaaccgggaattggttacgattagaattgtaaaaatagattgtagttgatctaaaccaatccaacttacgaacctagtgaattggaaatttggg
12401200
--------->
GLK1(2)
--------->
KAN4(1)
--------->
AHL20(1)
<---------
AHL20(1)
<---------
ARR11(3)
--------->
ARR11(3)
------->
GAMYB
------
ZmHOX2a(1)
<---------
KAN4(1)
--------->
AtMYB61
-----
MYB83
<---------
KAN4(2)
--------->
TOE2(3)
--------->
TOE2(3)
-----
MYB46(1)
--------->
LBD16
--------->
TOE1(3)
--------->
ARR11(3)
-----
P
<-----------
GT1
--------->
ANAC46
--------->
AHL20(2)
--------->
YAB1
taggaatatttttacccgaataatctaactcagaaaaacacaacctcaacccaaaaaaaaatagaaataccttgaaaacaaatataaactgactaaactt
12401300
<--
----------->
GT1
----------->
GT1
--------->
YAB1
------
--------->
YAB1
----------->
GT1
--------->
TOE2(3)
----------->
GT1
--------->
MYB46(3)
-----------
caaatataacgagtaaaacttgaaaatagataatatccataaactattcgaaaaaatggcaaaacaaaatcaacaatcgcaattctaaaaattggtataa
12401400
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AGI:
At1g34065.1
Description:
SAMC2 (S-adenosylmethionine carrier 2); binding. similar to SAMC1/SAMT1 (S-ADENOSYLMETHIONINE CARRIER 1), S-adenosylmethionine transmembrane transporter/ binding [Arabidopsis thaliana] (TAIR:AT4G39460.1); similar to S-adenosylmethionine transporter [Nicotiana benthamiana] (GB:CAF04055.2); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067)
Range:
from: 12398696
to: 12400861
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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