Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                          --------->CCA1(2)                                         --------->ARR11(3)                <---------AHL20(2)       <---------ARR11(3)      ------->TEIL          --------->At5g28300--------->CCA1(2)        <<<<<<<<<MYB98                               <-         ----------->GT1    <---------ARR11(3)     <---------TOE2(3)                               -- <---------AHL20(2)         --------->ARR11(3)   <---------AHL20(2)                    --------->YAB1 ------>AHL20(2)--------->AHL20(2)   ---------->DOF2<---------YAB1        --------->YAB1          <--   ttttatattgacggtaaaataaatacgagagatatgtccaaaagatttaaatttatgttaaaatatgaaactactactataacttatatttataacatat  12345800                                                  <----------DOF2                                                  --------->TOE2(3)                                                  --------->TOE1(3)                                              --------->AHL20(2)     <---------TOE2(3)                                  --------->AHL20(2)               <---------AHL20(2)                                  <---------AHL20(1)    <---------AHL20(1)                             --------->AHL20(2)<-----------GT1<---------YAB1          ------->TEIL    --------->YAB1  <---------YAB1--------->AHL20(1)   -------->P   --------->AHL20(2)--------->AHL20(1)<---------AHL20(2)   --------->AHL20(2) --------ARR11(3)        <-------TEIL   <-----------GT1 <---------AHL20(2)                <---------ATHB12 ------->ARR11(3)<---------AHL20(2)<---------AHL20(2)   --------->AHL20(2)      <----------DOF2   --- -------CCA1(2) <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)   <---------AHL20(2)       <--   atatctaccatgaatttataaatttgattcataaaataaaatttacaattaactttaatttattgttatttaagtttaatttctttgttccaaacatttt  12345900                                                                                         <----------DOF2                                   --------------->AtSPL8                              ------>ZmHOX2a(1)                            --------->AHL20(2)                                  --------->AHL20(2)                         <---------------AGL15  --------->GLK1(2)              <---------AHL20(1)               ----------->GT1    <---------ANAC46 <---------YAB1              --------->AHL20(2)            --------->STY1(2)<---------AHL20(2)<---------GLK1(2)               <---------AHL20(2) ------>AHL20(2)         ------>ZmHOX2a(1)  --------->YAB1               --------->TOE2(3) -------AHL20(2)    --------->KAN4(2)    <----------DOF2         <-----------GT1<---------AHL20(2) <-   ttaaatagttacctagatagtttattcctatttattgtttgtactttcatattctgattatccaaattttctgtttcttaatttaattcctctttattag  12346000                                                                                     ------>ZmHOX2a(1)                                                                                    --------->TOE2(3)                                                 --------->TOE2(3)                 ------>ZmHOX2a(2)                                                 >>>>>>>>>RAP2.2                  <------ZmHOX2a(2)                                               ------>MYB46(1)                   <---------ARR11(3)                                               ------>MYB83                      --------->ARR11(3)                                        <-----------HVH21                        --------->ARR14(2)                                      <---------ZAT6                             <---------ARR14(2)            <----------DOF2     =========================================================MADS_MADS          ---------->ID1        <---------------AGL15                           <------ZmHOX2a(1)         <-----------GT1        --------------->AGL15                       ---------->DOF2 ------TEIL<------------------------ANAC81    --------->WOX13(1)       <-----------------AGL3  ------   tttcattcatttttctttttgtttcttagtatttcttctagtggtcaccaatctaaaacttcatataatgcagtctaaaaaaggatccttatatgtaaga  12346100                     <---------AHL20(2)                    --------->AHL20(2)                 <---------ICU4                 --------->YAB1              <---------AHL20(2)           --------->AHL20(2)             --------->AHL20(2)            <---------AHL20(2)             <---------AHL20(2)      <---------AHL20(2)          <---------AHL20(2)         --------->AHL20(2)                                       <------       ------->TEIL<---------YAB1  <-----------TBP                 <------------CBF           <------    --------->ANAC55(2)    --------->ARR11(3)                   ------------>CBF             --------    <---------ANAC55(2)    <---------ARR11(3)                 <----------DOF2                <------- --------->ICU4 <---------YAB1<---------AHL20(2)           <------ZmHOX2a(1)  <---------AHL20(2)   -- --->ZAT6 --------->AHL20(2) --------->AHL20(2)        ---------->DOF2        --------->AHL20(2)   <-   ctaattatgtatttatttattattatatagattttatatttatatttatttgaagaaaaaaggactttcaattgttctatttaaacttgaaaactagctt  12346200       <---------ALFIN1      --------->MYB46(3)     ------->TEIL ---ANAC58                           --------->HSFB2a(2) ---ANAC58                           <---------HSFB2a(2) ->STY1(2)                         --------->MYB52(1)              <----------DOF2               <--- --STY1(2)  *TSS                   -------->P                     <---------DAG2   <---------AHL20(2) ------->ICU4                   --------->At4g35610          <-----------GT1      <---------AHL20(2) --------YAB1             <---------MYB52(1)       <-------TEIL<---------ALFIN1   --------->AHL20(2)   gatgatgaaccacttctgcctagcatctgttaagagctaccagaaaaatcaagttcgtcattttcacaccttttttttttttttttaaatttctcatcga  12346300                       <---------ZAT18                    <---------ANAC58                    <---------ANAC58                    <---------ANAC46                    <---------ANAC55(1)                     <---------WOX13(1)                    <---------ANAC55(2)                  <---------YAB1  --------->ANAC58                    <---------bZIP60(2)                  <---------AHL20(2)                    --------->ANAC55(2)                 <---------AHL20(2)     <---------AtLEC2  --------->ZAT18                  --------->AHL20(2)  <----------DOF2        -- ---ZmHOX2a(2)<---------YAB1      <----------DOF2--------->ANAC55(2)     --------->ANAC58   <--------   tcaatttgtatggtttacgattacgtgccctctaagctttctctgtatttcatgtgattttaattgacaacttacaagctttaagtttccagtttttctt  12346400                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                              <------                                                                                       <-----------GT1                                                                                   --------->ATHB51                                                                                   --------->YAB1                                                                                   <--------HAHB4               <----------DOF2                  <---------DAG2                     <---------ICU4            <-----------GT1                     <----------DOF2                    -------->HAHB4      --------->AHL20(1)                    <---------CCA1(2)                     <---------ATHB12      <---------AHL20(1)                --------->ANAC46                          <---------ATHB51      <---------AHL20(2)                --------->ANAC58                          --------->AHL20(2)     --------->AHL20(2)                 --------->ANAC58                          <---------YAB1<----    <---------YAB1                      <---------ANAC55(2)            ------>ZmHOX2a(2)<---------TOE2(3) ------->ANAC55(2)       --------->YAB1 --------->ANAC55(1)     <-----------RAV1(1)<--------ATHB1 ---GT1    <-----------GT1              --------->ANAC55(2)    <---------TOE2(3)  --------->ICU4<----   catgtgattatattttccttttctcaaacatcgtaaccatacacgtatagctttttcaacgtttttatgttgatctattagctaataattaacattttac  12346500                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                             --------->At4g35610                                   <-                                           --------->YAB1                                        <---                                          <------ZmHOX2a(2)                                      <--- -----ANAC46                            ------->GAMYB                                         <------ ---->ANAC55(2)                        --------->MYB46(3)                               <------ZmHOX2a(1) -----ANAC58               <---------At4g35610                                 --------->YAB1<------- -----ANAC55(2)   <------ZmHOX2a(1)  --------->MYB52(1)                       <------ZmHOX2a(2)  ---- -----GT1         ===============================HOX2a_HOX2a                  =================HOX2a_HOX2a -----ANAC58    <---------TOE1(3)   <---------WRKY12                         <---------ARR11(3) <---- -----ANAC55(1) <---------TOE2(3)   <---------WRKY38(1)     <----------DOF2  --------->ARR11(3)<-----   gtgaaaaatgaagggtttaaggaaatttcagcaaatggccaacgatcagaagaatagtgagtcttttccagcgaaggaagatcataagaaggatgatgcg  12346600      <---------ZAT2      --------->ZAT2      <---------At4g35610      --------->At4g35610     ----------->RAV1(1)    <-----------RAV1(2) ------NtERF2 ---------At4g35610                                                                      --------->ANAC58 -------->ZAT2                                                                           --------->ANAC58 -------->At4g35610                                                                     --------->SPL7 ---------ZAT2                                                                         --------->MYB52(1) --------ATERF1(1)                                                                  --------->ANAC46 ---NtERF2                                       <---------ARR14(2)              <---------ZAT14 ------At4g35610                              ----------->RAV1(1)                --------->SPL7 ---LBD16                             <-----------HVH21 <---------ETT(2)       <---------SPL7 --bZIP60(2)                        <------NtERF2--------->ARR14(2)           <---------ANAC58     <- ----->ATERF1(1)                 <---------LBD16<---------ALFIN1              <---------ANAC58    --- -----RAP2.3(1)         <------ZmHOX2a(1)     <---------ALFIN1                <---------ANAC46 ------ ----RAP2.6(2)        <---------TOE2(3)    --------->ANAC46                 <---------ANAC46  -------   gcagctccagcagaagtagaccataaggatgaattctcggcatcacagccacatccggtcgaaaacatagttttagttgggcgtacagggaacggcaaaa  12346700  Previous    Next  AGI:  At1g33960.1    Description:  AIG1 (AVRRPT2-INDUCED GENE 1); GTP binding. Identical to Protein AIG1 (AIG1) [Arabidopsis Thaliana] (GB:P54120); similar to avirulence-responsive family protein / avirulence induced gene (AIG1) family protein [Arabidopsis thaliana] (TAIR:AT1G33930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16380.1); contains InterPro domain AIG1; (InterPro:IPR006703) Range:  from: 12346212    to: 12348493    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version