Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <------MYB83            --------->At4g35610                                                            <------MYB46(1) --->ZmHOX2a(2)                                                                           ----------- ---ZmHOX2a(2)                                                                            <---------- ---->ARR11(3)                                                                         <-----------RAV1(1) -----ARR11(3)                                   --------->ATHB12           --------->AtLEC2 -----ARR14(2)                          <---------ZAT6          <---------ZAT18        <---------YAB1 ---->ARR14(2)            --------->ZAT14       <---------YAB1  --------->ZAT18     <---------MYB52(1) ->DOF2  ---------->DOF2  <---------ZAT14 ---------->DOF2   <---------MYB52(1)    <---------MYB46(3)   tcccaatgccaataagctccattacaactatagtgaatgttagtgaaagtatgatttcaacccttatgcactatttccatgcagtcgttatgttggtaca  12203500         ----------->HVH21        ------>ZmHOX2a(2)       --------->At4g35610       <------ZmHOX2a(2)      --------->GLK1(2)      --------->ARR14(2)      <---------ARR11(3)      --------->ARR11(3)      <-----------ARR10         ------>MYB46(1)      <---------ARR14(2)        --------->MYB52(1)      <---------AGP1            ------>MYB83     <------ZmHOX2a(1)        --------->MYB46(3)   <---------TOE2(3)          <---------MYB46(2)                  <-------TEIL                 ------ ---->AtSPL8             <-----------HVH21                  ----------->ARR10                <------- -----AtSPL8         ---------->DOF2                 ---------->DOF2                 --------->MYB46(3)   aaattgaggatctgaaggcatttgaaaggtcaccaaacagtctctctgagaaacatgaagcgaagaaattcatatttagtcaatagaaccactgagccgg  12203600                                  --------->AHL20(2)                                  --------->AHL20(1)                                  <---------AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                             <---------AHL20(2)                          --------->ATHB12                          -------->HAHB4                          ----------->GT1        --------->TOE1(3)--------->ICU4                                                            --  --------->YAB1         <---------YAB1                                                           <--  --------->ATHB12  --------->ANAC58                                                              ---  <--------ATHB1    --------->ANAC55(2)                                                 <---------ANAC58  <---------ICU4    --------->ANAC46                                                    <---------ANAC46 <---------ATHB12   --------->ANAC58  --------->ICU4                         --------->ANAC55(2) <--- --------->ICU4     <---------ANAC55(2)                                     <---------TOE2(3)   ----- <---------YAB1   --------->CCA1(2)<---------AHL20(2)                <-----------------AGL1    ------ --->LBD16     <---------YAB1--------->AHL20(2)                  --------->HSFB2a(1)<---------MYB52(1) --LBD16--------->TOE2(3)<---------ATHB12               <---------YAB1   <----------DOF2<---------ANAC58   acaatgattacctcaacatgatacgaaatgattaaatttaatgagtagtagtagtattctaatacaaatgttccgatttatgtaacgttggcttgtatta  12203700                                                                           --------->AHL20(2)                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                 <---------ARR11(3)                                                                 --------->AGP1                                                                 <---------ARR14(2)                                                                 <---------AGP1                                                                 --------->ARR14(3)                                                                 --------->ARR14(2)                             <---------AHL20(2)                  --------->ARR11(3)                         <---------YAB1                          <---------ARR14(3)                     <---------ZAT14                            <---------CCA1(2) ------>HAHB4     <---------ANAC46                             ----------->ARR10 -------ATHB12    <---------ANAC58 <------MYB46(1)           <------ZmHOX2a(2) ------>ICU4      <---------ANAC58 <------MYB83             <-----------HVH21 ------TOE2(3)<---------ANAC58    --------->MYB59           --------->ARR14(2)                 ------ ---->YAB1    <---------ANAC58<---------AHL20(2)            <---------ARR14(2)     <---------AtLEC2 --->ICU4   <---------YAB1   --------->AHL20(2)        --------->MYB52(1)  <---------AHL20(2)  <-----   atgatgcatatgttatgcttgagtgttcttataaatttggtcgaacacttgaaatgtaaacggatcagatcttgtatttaattgtgcatgggctaaatta  12203800                                                                          --------->AtMYB61              <----------DOF2--------->DAG2         <---------MYB52(1)   <---------MYB52(2)          <-----------GT1 --------->YAB1            <---------ARR14(2)   --------->MYB46(3)       <----------DOF2   <---------ATHB12--------->YAB1          ---------->DOF2 --->AHL20(2)--------------->AGL15    --------->YAB1--------->ARR14(2)--------->ZAT18   --------->At4g35610 ----AHL20(2)<---------DAG2 ---------->DOF2  --------->MYB59  --------->AHL20(2)<----------DOF2<-----   aatacttctcttttaccttttttgccaatgaaaagttgaataatagtaaggtccgataggcccattaaaaagcccacaaaccctttaatcagctatattc  12203900                         *TSS                       <---------ALFIN1                       --------->AtMYB61                  <-----------HVH21   ------>ZmHOX2a(1)       --------->ZAT14 --------->ANAC46                                                 <---------AHL20(2)       --------->ZAT2 --------->MYB46(3)                                               --------->AHL20(2)       --------->At4g35610--------->AtMYB61                       ---------->DOF2 <------NtERF2       <---------At4g35610<---------ALFIN1 --------->ZAT14--------->LBD16       <---------DEAR3(1) ------GT1        <-----------TGA1<-----------HVH21     <---------HSFB2a(2)   <-----------HVH21 -----   ccattccactgctcccaagtcgtcaccaccacttcccgtcctctctccagtcactgtttccgaagccctaaagttttcaaggtcgccgattaaatcacca  12204000                                                                         ----------->HVH21                                                                       ----------->RAV1(2)                                         <------ZmHOX2a(1)             --------->At4g35610                                      <------NtERF2                    <---------At4g35610                                    <---------ANAC58               ------>NtERF2                                    <---------ANAC58            --------->SPL7                                    <---------ANAC46            --------->REM1(2)                                ------->MYC3                    <---------ZAT14                 <----    <---------ANAC46            <-------MYC3                    --------->ZAT14                 -----    <---------ANAC58  --------->LBD16--------->LBD16           --------->ALFIN1                 -----    <---------ANAC58 --------->LBD16<---------DEAR3(1)        --------->LBD16          --------->ANAC58   <------NtERF2    <---------LBD16<---------LBD16            <-------PIF5             --------->ANAC58 ----->DOF2 <-----------GT1  <---------ALFIN1                 ------->PIF5     ---------->DOF2 <-----   aaggaggcgtttttatactattcccggttcaacacatggcggaggaagaggttatcgctatccccgtgcagccatctgaccacaagcgcaagcttgagaa  12204100                                      <---------WOX13(1)                                    --------->ATHB12                                <---------ZAT2           <------ZmHOX2a(2)    <------NtERF2          <---------ARR14(3)   ------>NtERF2          --------->ARR14(3)   <---------ATERF1(1)          --------->ARR11(3)  --------->ATERF1(2)          --------->ARR14(2)  <---------DEAR3(1)          <---------ARR14(2)  <---------ATERF1(2)          <---------ARR11(3)  --------->DEAR3(1)                                      <-----------HVH21         <---------GLK1(1)   <---------LBD16                                      <---------ICU4         --------->GLK1(1) --------->ANAC46     <---------ANAC58            <---------At4g35610        ----------->ARR10  --------->ANAC58     <---------bZIP60(2)         --------->At4g35610   --------->ARR14(2)      --------->ANAC58  ----------->TGA1              ------->TEIL   <---------ARR14(2)    <---------ALFIN1  --------->YAB1               --------->ANAC58 -----ARR14(2)         ----------->RAV1(1) <---------ICU4               --------->ANAC58  --------->At4g35610 ---->ARR14(2)       --------->At4g35610--------->YAB1         <---------YAB1    --------->ICU4  ---- ---->GLK1(2) ------>ZmHOX2a(1)<---------DEAR3(2)         <---------At4g35610    <---------YAB1 ----- ----GLK1(2)------>ZmHOX2a(2)--------->RAP2.6(3)<---------ANAC58        --------->ANAC46  <---------At4g35610   tctcgaatcggagatcctcgagcagcaacacgccggctcgattgataatgacgtttctgtagatgatgacaaaaacgcatctgattattgtcagccgaag  12204200                                                                                              <------                  <---------At4g35610                                                     <----------      <---------ANAC58                          <----------DOF2                       <---------ARR11(3)      <---------ANAC58          <---------TOE1(3)                        <-------TEIL --------->ARR11(3) ------->HVH21   ------->TEIL   <---------TOE2(3)                <---------AtMYB61---------->DOF2 ---->DEAR3(2) ---------->DOF2  --------->MYB59<---------------AGL15 <---------MYB46(3)<---------GLK1(1)   cgaccgaagcttgacgatgaagctgttgatggtttaggtatgtctgattcctttcaaagtatggattttggtggatgcatatcgaaaagatttcaccttt  12204300                            <---------REM1(1)                            <---------ANAC46                         <-----------RAV1(1)                 --------->ANAC55(2)                 <---------ANAC55(2)                 --------->ANAC58                 <---------RAP2.6(2)                                                  --------->At4g35610                 --------->ANAC58             ----------->GT1                         <---------At4g35610                --------->RAP2.6(3)        <---------ARR14(2)                       --------->ZAT18                <---------LBD16            --------->ARR14(2)            --------->TOE1(2)   -------- ----DOF2       <---------At5g28300    <---------ANAC46         --------->ICU4  <------ZmHOX2a(1) -GT1          <-----------GT1       --------->ALFIN1     --------->ALFIN1    --------->ALFIN1   gttcttaatattcgttgttacggcattgtgttgtagggattgggggaactgtagaaaacagtggtgatgttgaatccaaggaggagggaactgagaaacc  12204400  Previous    Next  AGI:  At1g33680.1    Description:  nucleic acid binding. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16270.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain K Homology, type 1; (InterPro:IPR004088); contains InterPro domain Protein of unknown function GLTT (InterPro:IPR008165) Range:  from: 12203925    to: 12208678    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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