Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ANAC58         ------>ZmHOX2a(2)                        --------->ANAC46     <---------KAN4(1)               ----------->RAV1(2)           --------->KAN4(1)         <---------ANAC58             --------->ANAC58               <---------KAN4(2)          <---------ANAC58   --------->ANAC58             --------->ANAC58              --------->YAB1         --------->ANAC55(2)     --------->ANAC58             ------->GAMYB         <---------At4g35610            <---------ANAC55(2)--------->TOE2(3)         <---------MYB52(2)        <---------ZAT14             -------->P            --------->TOE1(3)     --------->At4g35610--------->ANAC58  --------->ICU4       ------>MYB46(1)      ----------->RAV1(2) --------->ANAC46   <----------DOF2--------->At4g35610         ------>MYB83         <---------ANAC55(2)   tagacgctgctacaaacgcctgcttcaagaaatagtctgcagcaagaatgatcccaagtgataccaacaagtgacttatcgcaattacctgaacgaaaaa  11539400                                                                     ------>ZmHOX2a(2)                                                                     ======================HOX2a_HOX2a                                                                     ============================HOX2a_HOX2a                                                                    <------ZmHOX2a(2)                                                                    =============================HOX2a_HOX2a                                                                    =======================HOX2a_HOX2a                                                                   <---------ARR11(3)                        <---------AHL20(1)                         --------->ARR11(3)            ----                        <---------AHL20(2)                   <---------ANAC55(2)                 ----               ----------->GT1                          --------->ANAC55(2)                    ------            ------------>MYB.PH3(1)                     <---------ANAC58                       ------           --------->DAG2     --------->At5g28300       <---------ANAC58                  ------>ZmHOX2a(1)          ---------->DOF2    ----------->GT1            <---------ANAC55(2)       <---------ANAC46     --------->TOE2(3)  --------->AHL20(2)         <---------At4g35610            <---------ANAC58     --------->TOE1(3)  --------->AHL20(1)         --------->At4g35610<-------GAMYB ------>ZmHOX2a(1)     <----------DOF2<---------YAB1 --------->AHL20(2)   --------->ANAC46          <---------ANAC58   ttcaaaactttaaaaagctgttacaataaaatggtaaataaacaacatcgtgaagcttacgttacgagagatcgttgatgtgtttcctgttcctgcacca  11539500                                                             <---------ARR11(3)                                                             --------->ARR11(3)                                                            <---------GLK1(1)    --------->ANAC58                                                  <---------------AGL15          <---------ANAC55(2)    <---------ANAC58                              --------------->AGL15          --------->ANAC55(2)    <---------ANAC46                              ===================================================    <---------ANAC58                             ----------------->AGL3          --------->ANAC46 -->MYB46(1)                          <----------DOF2   <---------HSFB2a(2)      --------->ANAC58 -->MYB83                         <---------CCA1(2)     --------->HSFB2a(2)     <---------LBD16 --->DEAR3(1)                  <-------TEIL      ----------------->AGL2      <----------DOF2     <--- --->AtMYB61              ---------->DOF2        ====================================================   tccatagcttggactgagagttttctctcaaagttcatctctttagaagaacccatttgtagaaatctttggccatcgggtttacggaattttgagagat  11539600                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)                                 <---------------AGL15                                 --------------->AGL15                                ----------------->AG                                <-----------------AG                                <-----------------AGL1                                ----------------->AGL1                                ----------------->AGL2                                <-----------------AGL2                                <---------------AGL15                                --------------->AGL15                            <---------ANAC58                                <-----------------AGL3 ------>ZmHOX2a(2)     <---------ANAC58                                ----------------->AGL3<------ZmHOX2a(2)      <---------ANAC58                               <-----------------AGL1------->TEIL           --------->MYB52(2)                           --------->HSFC1(2)        <-----------ARR10    --------->ARR14(2)                           <---------HSFC1(2)        <---------ARR11(3)   <---------ARR14(2)               --------->YAB1 <-----------GT1        --------->ARR14(2) <---------HSFC1(2)           <------NtERF2   <---------HSFB2a(1)       <---------AGP1     --------->HSFC1(2)        <---------ZAT18    --------->HSFB2a(1)       --------->ARR11(3) <---------DEAR3(2)     <---------HSFB2a(2)  <---------KAN4(2)          <---------ARR14(2) <---------HSFB2a(1)     --------->HSFB2a(2)  <-----------ARR10         <---------ARR14(1)  --------->HSFB2a(1) --------- ================================================MADS_MADS      --------->ANAC58<---------ZAT2 ------ ----TEIL ----------->RAV1(1)<-----------GT1    --------->MYB52(1)---------->DOF2<---------ANAC58 ===============================================MADS_MADS       --------->ANAC58--------->ZAT2 ------   tcaacttctgggcaccatcagaattgagaattttcccatttttggaaccgaaacggatcttagagcaagaaagacggttccttgctggagaagaagctaa  11539700                                                    --------->ALFIN1                                                  <---------TGA1a                                                  <---------bZIP60(2)           *TSS                                                  --------->TGA1a              --------->YAB1                    ========================================bZIP_DOF        --------->bZIP60(2)                    ---------->DOF2               <---------O2           <------NtERF2        --------->CCA1(2)                         <---------ANAC46     --------->ANAC58       <---------ARR14(2)                         --------->O2         --------->ANAC58 >At4g35610    ----------->GT1                  ------>NtERF2          --------->ANAC46            -- ---->DOF2 <------ZmHOX2a(1)                   --------->DEAR3(1)     --------->RAP2.6(3)          <- --->MYB52(1) --------->ALFIN1             --------->ATERF1(1)       --------->CCA1(2)            ---   aggagagaagataggagtggctaaaagagtagccatgggtatggagacgacgacgtggatgtgattctaagagacggcacatcatagtcttctccatctt  11539800              <------------CBF                                                                    <--             --------->ATHB12                                                                     <--            <---------YAB1                                              --------->GLK1(2)        ----      <---------YAB1                                                    --------->ARR11(3)     <-----    --------->YAB1                                            <---------ETT(2)       <----------DOF2   --------->ICU4                                             --------->ETT(2)     ---------->ID1<---  <---------TOE2(3)                                   <---------HSFC1(2)--------->ARR14(2)  --------- <---------DOF5.7(2)           --------->ARR11(3)     --------->HSFC1(2)<---------ARR14(2) <---------ANAC46 ------->DOF5.7(2)           <---------YAB1           --------->HSFB2a(1) ------>ZmHOX2a(2)<---------LBD16 --------MYB52(1)   <------------CBF                ---------->DOF2    <------ZmHOX2a(1)  <---------LBD16 ------>TOE2(3)<---------WOX13(1)     <---------AtLEC2<---------HSFB2a(1)<------ZmHOX2a(2)<----------   cgttaatgatgtttgtgattgaaattggattacgatatttgtatggacaagagagaaagttctatcgacaagaggatccagttttgtctttttccgggtt  11539900                                            --------->AHL20(2)                                            <---------AHL20(2)                                          <---------AHL20(2)                                          --------->AHL20(2)                                          <---------YAB1                                         --------->TOE2(3)                                         --                                         --------->YAB1                                      <-------                                     <---------AHL20(2)                                --------->ANAC55(2)   <-----------GT1                  --------->AHL20(2)                                 --------->ANAC58 ----MYB83 <---------TOE2(3)    --------->AHL20(2)                                     <---------ANAC55(2) ----MYB46(1)                   <---------AHL20(2)                            <---------ARR14(2)  <-- ----->MYB59     --------->ARR11(3) --------->AHL20(1)                        --------->ARR14(2)----- ---P   <---------MYB52(1)    --------->TOE2(3)                     <---------YAB1     --------->ANAC46 ------AtMYB61   <---------ARR11(3) <---------AHL20(2)              <---------AHL20(2) --------->ANAC58 >LBD16<-------GAMYB<----------DOF2 <---------AHL20(1)          <----------DOF2       <---------TOE1(3) -------AGL1 ---------->DOF2  <----------DOF2<---------YAB1<-------TEIL<---------YAB1 <---------TOE2(3)   aggtttttccgttaagaaaggtcttttgtctactttaatttaatattaatatagtttttgatacatcttttttattagagtattttctaacgtaactttt  11540000                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)  --------->ARR14(2)                                    <---------AHL20(2)  <---------ARR14(2)  <---------YAB1                   <---------AHL20(2) <---------CCA1(2)  <-----------GT1    ---------->DOF2 --------->AHL20(2) ------->YAB1  ------>MYB83        <---------ANAC58--------->AHL20(2)                           ----- ---DOF2<---------ATHB12    <---------YAB1         <---------AHL20(2)                       <-------- -------YAB1   ------>MYB46(1)     <---------ANAC58<---------AHL20(1)                 <---------WOX13(1) ---->YAB1<-----------GT1 --------->YAB1           --------->AHL20(1)<---------AHL20(2)   --------->ZAT6   atcatatccaataaaccaaattttacaattacaataggcttgaaagatgacaataaattaaatcttcgaatatattttcatacaagtgaatgacactaac  11540100                                               <---------MYB59                                               --------->TOE1(3)                                               --------->TOE2(3)                                     --------->MYB52(1)                                   <---------MYB52(2)            <----------DOF2       <---------ZAT2                       <---------MYB52(1)       ------>ZmHOX2a(1)          --------->At4g35610                 <----------DOF2--------->YAB1      <---------MYB59      ---------->DOF2<---------MYB52(2)         --------->TOE2(3) ---->ZAT6 --------->TOE2(3)      --------->ZAT2             ---------->DOF2  <---------YAB1     ---- -MYB52(2) --------->TOE1(3)      <---------At4g35610      --------->AtMYB61<---------ICU4       <---   accaatttcctaacctttaaaaccgaaaccaaagtcagctaacaaataacctaaacctagaccaaaagaaacctttagttatgacactcataagagatta  11540200                               ------->GAMYB                            <-----------GT1                            --------->MYB52(1)                         --------->YAB1            --------->ICU4                    ================================HOX2a_HOX2a          --------->YAB1            --   <<<<<<<<<<GT-3b  <------ZmHOX2a(2)         --------->TOE2(1)         <-------TEIL               <- ----->ANAC55(2)   <---------ARR11(3)         --------->TOE1(1)     --------->ARR11(3)     <---------At4g35610 ------ANAC55(2)   --------->ARR11(3)        ------>ZmHOX2a(1)    <---------ZAT6      <---------YAB1   catatttttcttctgtctagagatcaattgtaacggtactcatgctcctcgtactgatgagtattgtagtgatattcatactgagacgatgactgctcat  11540300  Previous    Next  AGI:  At1g32080.1    Description:  membrane protein, putative. similar to unnamed protein product [Vitis vinifera] (GB:CAO67510.1); contains InterPro domain Duffy antigen/chemokine receptor; (InterPro:IPR005384); contains InterPro domain LrgB-like protein; (InterPro:IPR007300) Range:  from: 11537322    to: 11539780    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g32090.1    Description:  early-responsive to dehydration protein-related / ERD protein-related. similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G02900.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G22120.5); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT3G21620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22495.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67050.1); similar to hypothetical protein OsI_033607 [Oryza sativa (indica cult Range:  from: 11540005    to: 11544111    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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