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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                       --------->YAB1
                                                       <---------ICU4
                                                      <---------YAB1
                                                     <---------ARR11(3)
  <---------HSFC1(2)                           --------->ANAC58                                  <--
  --------->HSFB2a(1)                 --------->AHL20(2)                                         <--
  --------->HSFC1(2)                  <---------AHL20(2)                  --------->MYB52(1)     <--
----GT1                        <----------ID1  <---------ALFIN1     --------->ANAC58          <-----
->YAB1 <----------DOF2    --------->YAB1       --------->ANAC58     --------->ANAC58       ---------
 
atcgatgcttctttactcatttagtagaaacataacaacaaaaaattggcacacatgatcataaccaaaacaagacaaaacgatgaaacacacatatatt  11445100
                                                                 --------->ARR14(2)
                                                                 <---------ARR14(2)
                                                               --------->HSFC1(2)
                                                               --------->HSFB2a(1)
                                                               <---------HSFB2a(1)
                                                               <---------MYB46(3)
                                                    --------->YAB1
          --------->AHL20(2)                      --------->GLK1(2)       <---------ANAC58
          <---------AHL20(2)                      <---------ARR14(2)      <---------ANAC58
  ----------->GT1                          ---------->DOF2     <---------HSFC1(2)
-------YAB1             --------->ICU4  --------->ANAC58       <---------DEAR3(2)
-------ANAC46         --------->CCA1(2) --------->ANAC58      <---------DEAR3(1)        <---------ANAC58
-------ANAC55(2) ---------->DOF2        --------->ANAC46    ------------>AtMYB77      ------->TEIL
----AHL20(2)  --------->AHL20(2)      ----------->RAV1(1)  ----------->HVH21 <-----------HVH21
>AHL20(1) --------->AHL20(1)       ------->TEIL   --------->ARR14(2)  <---------MYB52(1)<---------ANAC58
 
atgtatagtaaaataaaataaaaagagatgatgaaatgaacccacacaaagcgaatcgtgatgcgacggttcccttggcctgtcaaatgtatcgtgacca  11445200
                                          --------->ANAC55(2)
                                          --------->O2
                                          <---------ANAC55(2)
                                          --------->ANAC58        --------->ANAC58
                                          --------->ANAC58        --------->ANAC58
                                         ------>NtERF2           --------->SPL7
                                     --------->DEAR3(1)       <---------TGA1a
                                     --------->RAP2.6(2)      <---------ANAC55(2)
                                     --------->ANAC46         --------->O2
                                     --------->ANAC58         <---------O2
                                     ------->GAMYB            --------->TGA1a
              <---------ZAT2         --------->ANAC58         --------->ANAC58
              ----------->RAV1(2)    ===================================MYC_MYB
              --------->ZAT2        <------------AtMYB77      ======================================
              <---------At4g35610   --------->MYB46(3)        --------->ANAC46                  ----
              --------->At4g35610   --------->DEAR3(2)        --------->ANAC58       <---------ETT(2)
            <-----------RAV1(2)     ====================================MYC_MYB      --------->ETT(2)
          <-----------HVH21       <---------ARR14(2)          --------->ANAC55(2)   <--------P  ----
       --------->LBD16            --------->ARR14(2)          ===============================MYC_MYB
     <---------LBD16          --------->YAB1                  --------->ANAC55(1)  <---------MYB52(1)
   --------->ARR14(2)        <---------ATHB12               <---------ALFIN1 ----------->HVH21  <---
   <---------ARR14(2)       ------>MYB46(1)               <---------ALFIN1  <-----------HVH21   ----
 ----------->HVH21          ------>MYB83<---------ALFIN1  --------->AtMYB61 <-----------TGA1    <---
 --------->ANAC46          --------->WOX13(1)            --------->ANAC46  --------->ANAC46     <---
 
aaacccgacccggtttcagctgtctcaaaccaatcagaaaccgccacgtattctacttccaccacacgtaagccatctccgtcaccggtagacaacatgg  11445300
         <---------CCA1(2)
        ------>NtERF2
        <---------RAP2.6(3)
       <---------ANAC58                  --------->ANAC58
       <---------ANAC58                  --------->ANAC58
  <----------DOF2                      <---------ALFIN1
=============bZIP_DOF                 <------NtERF2                                                <
----->PCF2                          --------->ANAC46                                               -
----->ZAT18                <---------AHL20(1)                <-----------HVH21        <-----------GT1
------PCF2                 <---------ARR11(3)   --------->AHL20(2)                <---------AHL20(2)
----->PCF5      --------->HSFB2a(2)<---------LBD16--------->YAB1      --------->MYB52(1) --------->TOE2(3)
------ZAT18     <---------HSFB2a(2)------>ZmHOX2a(1)     --------->TOE2(2)        <---------YAB1  --
------PCF5<-----------ARR10--------->AHL20(1)  --------->YAB1--------->LBD16  <----------DOF2  -----
 
gccctctttgccgtctcttctcgagaccaatatttttcctcggcacaccaaaataataaacctccgtcaaaactcacggttcttttttattacattaaac  11445400
                                 <-----------GT1
                             ----------->TBP
                             --------->AHL20(2)
                             <---------AHL20(2)
                           ----------->TBP                                                <---------
                           --------->AHL20(2)                                        <---------At4g35610
                         ----------->TBP                                             <---------ZAT2
                        ------->TEIL                                                 <XXXXXXXXXXXXXX
                     --------->ANAC58                                                --------->ZAT2
<---------MYB52(1)   --------->ANAC46                                                --------->At4g35610
-------GAMYB         --------->ANAC58                                                --------->GLK1(1)
-------->At5g28300 <---------ALFIN1                                                  <---------GLK1(1)
--------->GT1    ------>ZmHOX2a(1)                 ---------->ID1    *TSS       <---------LBD16    <
---->ANAC46 <----------DOF2<---------AHL20(2)      <---------CCA1(2) ----------->GT1 <XXXXXXXXXXXXXX
 
gccgttaaacattctctttcctccacgtatatatatatactcttcgtaactcttgtctctcttctcttcgtctagttaaaactctcggagctcctttcag  11445500
            <---------ATHB12        <---------ANAC58
        --------->MYB46(3)          <---------ANAC58                               --------->GLK1(1)
       --------->ANAC58          <---------ARR14(2)                    --------->LBD16
   <-----------HVH21             --------->ARR14(2)                   --------->HSFB2a(2)
-DOF2  --------->ANAC58        --------->LBD16                        <---------HSFB2a(2)
XXXXXXMIR319A/B              <---------LBD16                <<<<<<<<<CBP60g       <---------ARR11(3)
---------LBD16          --------->HSFB2a(2)           <-----------GT1<---------LBD16
XXXXXXMIR319C           <---------HSFB2a(2)--------->ZAT14  <<<<<<<<<SARD1        --------->ARR11(3)
 
ttctcgggtcacccaataacccgacttctcgacccggtttcgtctctgttctcattttttccaaatttctcttccggaaaatgaagatttctatgggttt  11445600
                     ----------->GT1     <-------TEIL
                   --------->ZAT14     --------->ARR14(2)
                   <---------ZAT14     <---------ARR14(2)    --------->At4g35610
        <---------ARR14(2)             <---------GLK1(2)   <-----------RAV1(2)              --------
        <---------ARR11(3)          --------->YAB1       <-----------HVH21  <---------GLK1(2)
        <---------GLK1(2)     --------->ANAC55(2)    <---------ARR11(3)  <---------AHL20(2) <-------
        --------->ARR11(3)    <---------ANAC55(2)    --------->ARR11(3) --------->YAB1      <-------
        --------->ARR14(2)  <-----------GT1    >>>>>>>>>TBF1 <---------At4g35610  <----------DOF2  <
 
ttgagtttggagattttctcagtgaagtttattacataatcagattcgaagaagaagacatttcaggtgagtttataaaaattctcttttttgaagattt  11445700
  ----------->GT1
  --------->LBD16
 --------->HSFB2a(2)        <---------MYB52(1)
 <---------HSFB2a(2)      <---------MYB46(3)                                           <----------DOF2
<---------LBD16           --------->MYB52(2)                                          ------>ZmHOX2a(2)
->ARR11(3)               <-------TEIL                                               --------->ARR11(3)
--ARR11(3)              --------->ARR14(1)                                          <---------ARR11(3)
--GLK1(2)               --------->GLK1(2)                                        <------ZmHOX2a(2)
---------LBD16         <---------GLK1(2)                 --------->ATHB12  <-----------GT1
 
ttctcgggaaaataagaaaacagagagattcgttgctctgtttctgttcttctgtagaaacgattagtcactggtttttttccgatcgatcttttcaata  11445800
                                                      <----------DOF2
                                                      <---------DAG2
                ---------->DOF2<---------AHL20(2)    <---------DAG2
        --------->LBD16       xxxxxxxxxxxxxxxx>smallRNA(i)
       --------->LBD16       <---------RVE1(1)       --------------->AGL15
       --------->HSFB2a(2)   <---------CCA1(1)      <-----------------AGL1
       --------->ANAC46     --------->ARR11(3)      ----------------->AGL1        --------->ATHB12
       <---------HSFB2a(2)  <---------GLK1(2)    <---------MYB52(1)             <---------WOX13(1) -
      <---------LBD16 <-------TEIL               --------->DOF5.7(2)          --------->ATHB12    --
      <---------HSFB2a(2)   <---------ARR11(3) <---------ANAC58            <---------ANAC55(2)    <-
      --------->HSFB2a(2)  <---------RVE1(1)   <---------ANAC58            --------->ANAC55(2)    --
     <---------LBD16 --------->CCA1(2)       <-----------GT1           <-----------HVH21          <-
 
ctattttttcccggaaaaaaaaagattcagagatttttttttttttttttgcgttacctttttctgcaaacatttgtcacttgattgatttgatttagac  11445900
                                                                                                   -
                                                                                                   <
                                                                                                <---
     <-------TEIL                                                                              <----
<-------TEIL <---------AHL20(2)                                                                -----
-------->ARR14(1)                                                                            -------
------->ARR11(1)                                                                             <------
--------GLK1(2)       <---------WOX13(1)                 <---------GLK1(2)                   <------
------->ARR14(2)   <---------YAB1              ----------------->AGL2                       --------
--------ARR14(2)<-----------GT1         --------->ZAT6--------->YAB1                        --------
 
agattcgattcgtcatttttttctgattaataccaaaattttctcactaaacccaaatcagaaacttcaccgaaaaatgtgtattcattcttcaatatta  11446000
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AGI:  At1g31880.1   
Description:  BRX/NIP3;1/NLM9 (BREVIS RADIX); identical protein binding / water channel. similar to BRXL1 (BREVIS RADIX like 1) [Arabidopsis thaliana] (TAIR:AT2G35600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67126.1); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)
Range:  from: 11445470    to: 11450169    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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