Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--          <---------ICU4                                                                          <--      <-------TEIL                                                                                <-- ------>ANAC58                             <---------DAG2                         <----------DOF2 --- ----->P <---------YAB1                    <----------DOF2                    ----------------->AGL1- ------>ANAC58                           <---------At4g35610                <-----------GT1       --- ---->MYB46(3)     <----------DOF2 <----------DOF2                   --------->YAB1              <---   aacccatgttcatcatttcttctttgtccagataactcttttcagcttttctgtattctttctccctcttaacataatttgcctcttttgttcaaaccca  10828500          <---------ANAC58          <---------ANAC55(2)          --------->ANAC55(2)          <---------ANAC58          <---------ANAC55(1)          <---------ANAC46         --------->MYB52(2)       <---------MYB52(1) <----------DOF2 -----ZmHOX2a(2) -------ARR14(3) ------>ARR14(3) ---------ARR10 ------>ARR14(2) -------ARR14(2)                                                                                  <-- -------AGP1                                                           --------------->AtSPL8-------- -------ARR11(3)                                                      <----------DOF2        <------- ------>ARR11(3)                                               <----------DOF2             ---------- ----->ZmHOX2a(2)                                       --------->GLK1(2)           <---------ZAT18 ------>AGP1                    --------->AHL20(2)      <-----------ARR10           --------->ZAT14 ------CCA1(2)                 <---------MYB52(1)      <---------GLK1(2)            --------->ZAT18   gatctttctgttacttgttttctcattttctccattaattcattctccatttcgaaagaatcttactttgttctttgtacttcttgtggactcttctggg  10828600           <---------AGP1           --------->AGP1           --------->ARR11(3)                            <---------ANAC58           <---------ARR14(2)                            <---------ANAC58           --------->ARR14(2)                           --------------->AtSPL8           <---------ARR11(3)                <----------DOF2     <---------ANAC58                       ------>ZmHOX2a(2)     <---------ANAC58                      <------ZmHOX2a(2) -------ANAC46         ---------->DOF2    --------->ARR11(3) ->HSFB2a(2) ------>ZmHOX2a(2)            <---------ARR14(2) --HSFB2a(2)<------ZmHOX2a(2)             --------->ARR14(2)              ---------->DOF2         <-- ->RAV1(2)<---------CCA1(2)               <---------ARR11(3)          ---------->DOF2           <----   tcgtattgcttcagatctactagctaaaaggagcatgaagttgggatctttggtttgttttgtgccttcttgaaaagaaagtttcagcattttagtttct  10828700                       <----------DOF2                  <---------HSFC1(2)                  --------->HSFB2a(1)                  --------->HSFC1(2)                                           <---------ANAC46                  <---------HSFB2a(1)                                         <---------MYB46(3)-----            --------->DAG2<---------ANAC58                     <----------DOF2<-----------RAV1(1) ----------CBF----------->GT1            <-----------GT1     <---------At4g35610 --------->ALFIN1 -----YAB1 ---------->DOF2<---------ANAC58     <---------MYB52(1)       <------------CBF   <---------ATHB12   gattgtaagaacaaaaaggaaatttctttcttgagactcgttttaagcccttggttctcttgctgcttctctgctattgtctggtggaggctaatgaaca  10828800                                                                                                    <                                                                           --------->ATHB12     <----                                                               --------->At4g35610       <----------DOF2                       <---------ANAC58                        <-------GAMYB <---------WOX13(1) -----                       <---------ANAC58                        <---------At4g35610   --------->At5g28300       --------->STY1(2)                                    <-------TEIL  ===========================       <---------STY1(2)<----------DOF2--------->ZAT6      --------->GLK1(2)<------------CBF   <----- ----->DOF2<---------STY1(2)     <------------CBF <----------DOF2         ------>ZmHOX2a(2)  <-------   aagaagagtagctagatagggttttgcttatctgtaattgaacactctctctctttgtgagattcagttgcagtgatcgattgactcggtgattttagga  10828900                                    --------->HSFB2a(2)                                    <---------HSFB2a(2)                                   <---------LBD16                                 --------->GLK1(2)                                 --------->ARR14(2)                                --------->RVE1(1)    <---------ANAC58         --------->DAG2    <---------ANAC58        ---------->DOF2 ----------DOF2          <------ZmHOX2a(1) -----GLK1(2)          <---------TOE2(3) ---->ARR14(2)     <---------At4g35610    <---------ARR11(3) =HOX2a_HOX2a      --------->At4g35610    --------->ARR11(3)     <----------DOF2 -ZmHOX2a(1)       <---------ZAT2--------->ARR11(3)           <-----------GT1               --------- --TOE2(3)         --------->ZAT2<---------ARR14(2)    <-------GAMYB       <---------AHL20(2)   ttctttgagtggctatgtcgaagctgaggaaaaagtatctggaacatcttctatgtgtgttgattttctttacttatgttattggctatggagaagctca  10829000                                                                <------MYB46(1)                                                                <------MYB83                                                                ----------->GT1                                                               <---------MYB46(3)                                                               --------->MYB111(2)                   <-----------RAV1(1)                         <---------AtMYB61          <---------ANAC46                                     --------->MYB111(1)          <---------ANAC58                                     <---------DEAR3(1)          <---------ANAC58                                     --------->MYB46(2)                  --     --------->At4g35610                                       --------->ALFIN1                    --    --------->ARR11(3)                 ------->GAMYB           --------->MYB55(2)              ------    <---------ARR11(3)             --------->MYB46(3)         <--------P                 ----------->HVH21 >At4g35610  --------->REM1(2)     --------->REM1(1)          <---------MYB55(1)       --------->ALFIN1   gtccaagagcttccttgtagattgtggctcaaatgctacaaccgaagtagatggaagaacatgggttggtgatttatctcccaacaagagtgtgaccctg  10829100                                                       --------->CCA1(2)  --------->ARR14(2)                                  <---------ARR11(3)  <---------ARR14(2)                                  --------->ARR11(3) ------->ANAC58                       --------->ARR14(2) ------->ANAC58                       <---------ARR14(2) --->AtLEC2                   ---------->DOF2   <---------At4g35610                  --------->ALFIN1   caaggatttgatgccattactgcttcgacatcgaaaggaagttctgtttacgctgagatatataagactgctcgtgttttcgacgctgtgttgaactata  10829200                                                                                                   <-                                                                                                   <-                                --------->MYB59                                                    <-                              <<<<<<<<<MYB98                                                      <--     ----------->GT1          <---------MYB52(1)                                               <-----    <---------TOE2(3)     <----------DOF2        <----------DOF2                          <---------At4g35610    <---------TOE1(3)  <-----------GT1   <-----------HVH21       --------->TOE2(3)   <----------DOF2   catttgaaggtataactcaagggaattactttgttaggctccatttcagccctttcgctattgaaaaccacaatgtgaatgagtcttctttcagcgtctt  10829300    <------MYB46(1)    <------MYB83                                --------->LBD16   <---------AtMYB61                --------->LBD16                   --------->ANAC58 --------ANAC58      ----------->HVH21         <---------ANAC46       --------->ANAC58 --------ANAC46     <---------WOX13(1)        <---------LBD16       ---------->DOF2 --------ANAC58    <---------ANAC58<---------LBD16      <-----------ARR10 -------LBD16      <---------ANAC58<---------ANAC46     --------->GLK1(2)                          <- -----DOF2       <---------YAB1   <---------LBD16      <---------GLK1(2)                <---------At4g35610   tgcggatggtctgagactgatgcttgacatcaacatcgcgggagaaatcgcgcataagaatctcatcttggaaagcactggtcacaatgctactgcctct  10829400  Previous    Next  AGI:  At1g30570.1    Description:  protein kinase family protein. similar to THE1 (THESEUS1), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42539.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73534.1); similar to H0714H04.1 [Oryza sativa (indica cultivar-group)] (GB:CAH66974.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 10828915    to: 10831464    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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