Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->WOX13(1)                                  <-                                   <---------ICU4                                               <----                                   --------->YAB1  ---------->DOF2                      ---------->DOF2                                  <---------YAB1  --------->YAB1                    --------->AHL20(2)                               <---------AHL20(2)<---------ATHB12                   <---------AHL20(2)                              --------->AHL20(2) <<<<<<<<<ARR2             ---------->DOF2----------- ---------->ID1  ---------->DOF2  <---------AHL20(2)                      --------->AHL20(2)    -----   tttgtctccaaatacaaacaaaagaaattcaattttataattacagaaacaatcaaagaacacaaaaaacattccattaaagacaattaataaagaaata  10800500           <---------HSFC1(1)           --------->HSFB2a(2)        <---------ARR14(2)        --------->ARR14(2)  --------->TOE2(2)------>MYB83  --------->TOE1(2)------>MYB46(1) ----------->RAV1(2) ----------GT1   <---------MYB59 -----ICU4 <---------HSFB2a(2)<-----------HVH21                                                <----- >GT1   --------->GLK1(2)   ------>ZmHOX2a(2)                           --------->At4g35610    <----- ---->YAB1<---------LBD16  <---------At4g35610                          <---------At4g35610<---------ZAT2   ataacctgcgattctggaaccaaactttgatctgtcgaggctcgatgttacagagaatgggacattcacgaataagctgttgtcttctcagagagctagg  10800600                                                       <---------TOE2(3)      <---------------AGL15                                                       --------------->AtSPL3 <----------DOF2                                                      --------->MYB52(1)      ------>ZmHOX2a(1)                                                    <---------MYB52(2)    --------->ARR14(2)                                                  ------->TEIL     <------NtERF2                                               --------->ALFIN1   <---------RAP2.6(3)                                             <---------ANAC46    --------->LBD16                                           --------->LBD16  <---------ANAC58  =======================                                           ------>NtERF2    <---------ANAC58 --------->TOE2(3)   <---------ZAT18                        <---------RAP2.6(2)    --------->ETT(1)   --------->ZAT18                       <---------LBD16   ------->TEIL   <---------ARR14(2)  <------ZmHOX2a(1)        --------->ARR11(3)<---------ANAC58   <---------LBD16       <------ZmHOX2a(1) -MYB83                    <---------ARR11(3)<---------ANAC58  --------->MYB52(1)  <---------LBD16 -MYB46(1)--------->At4g35610   --------->REM1(1)<---------CCA1(2)--------->LBD16  <-----------RAV1(2)   tttaggacactcagcataaactctctcaagagcttcaacttgttccggcgtgtatctaacgtacttgccggaatcaaatcctttatcaggagagtctcta  10800700                       <---------ARR14(2)                       --------->ARR14(2)                                              <------ZmHOX2a(2)                      <---------CCA1(2) --------->At4g35610                           <---------ARR11(3)                    --------->YAB1  <-----------HVH21                                 --------->ARR11(3)       <---------ANAC58--------->ARR11(3)                                         ---------->DOF2       <---------ANAC46<---------ARR11(1)                               ---------->DOF2<-------------       <---------ANAC58<---------ARR11(3)    <---------GLK1(1)        <---------------AGL15   <------ =====================================================================================MADS_MADS   tcgtccatggagtgatgagccatcatatcttccaaacaggtcagtagaaatcagagagagagagagggtttacaaaaagaagaataaagatcgatacttt  10800800                                                                                                <----                                                                                                <----                                                                                                -----                                                                                              <------       ---------->DOF2                   <------MYB83                                       ---------   ----------->GT1--------->At4g35610    <------MYB46(1)          ------>ZmHOX2a(1)         <-------- --------WRI1     <---------At4g35610  <--------P               ----------->RAV1(2)        <---------YAB1 ----DOF2       <-----------RAV1(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------ZAT6   --------->ICU4   gagagaagtaaaagagactcagatgaagaaatattagatgggtaggctctctgagaagagagagcctcctgtgagagtgttcatgagatggtaatggttg  10800900 ---------->DOF2                                                                        <---------At4g35610 --MYB46(1)                                                                             --------->ZAT2 --MYB83                                                                                --------->At4g35610 ------>GT1                                                                   --------->DAG2 --P                                               ---------->DOF2  ---------->DOF2     <---------ZAT2 >ATHB12                                   *TSS<------------CBF ----------->GT1         <------NtERF2 -MYB46(3)                              ---------->DOF2    ---------->DOF2   ---------->DOF2   gagaaaagagttttttgggtttttttcatttgctctctctctcaaaggagattgaaagatggaaagaggtaaaaggagcaaaagcgaggcagctaagtag  10801000                                                          <----------DOF2                                                         ------>ZmHOX2a(2)                                                        =========================HOX2a_HOX2a                                                        <------ZmHOX2a(2)                                                       --------->ARR11(3)                                                       <---------ARR11(3)                ------>MYB83                                                       --------->ARR14(2)                ------>MYB46(1)                                                       <---------ARR14(2)              ------->GAMYB                                                      --------->RVE1(1)            --------->MYB46(3)                                        ---------->DOF2<---------ARR14(3)     --------->ANAC58                                <---------ARR14(2) ---------->DOF2            --------->ANAC46                            <------ZmHOX2a(1) ---------->DOF2         ---------->DOF2-------->P                            ===================================HOX2a_HOX2a<------ZmHOX2a(1)         -                            ====================================HOX2a_HOX2a   --------->ANAC58   ----                           ----------->GT1----------->GT1========================HOX2a_HOX2a     <---                          ----------->GT1--------->DAG2--------->ARR14(3)<----------ID1--------->MYB46(3)   agagaagagagagaagagagagaagagagaggaaaatactgaaaaagtaaaagtaaagatctttctgagagagaaaggacaaggaacaacccaacaagat  10801100                                    ----------->GT1                                               <--                                 ---------->DOF2                                             <-------       ----------->GT1          <---------AHL20(2)                                         <---------  --------->ZAT14               --------->AHL20(2)       <------MYB46(1)                   <---------  <---------ZAT14           <---------AHL20(2)           <------MYB83                     <---------- -------->ANAC46            --------->AHL20(1)          --------->MYB111(1)           <----------DOF2 ----->ZAT18                --------->AHL20(2)          --------->MYB59          ---------->DOF2  <-- ----TEIL   --------->ICU4 --------->AHL20(2)          <--------P           ----------->GT1<---------At5g28300   gcactaaactggtaaatattgttttcaaaaaaaattaaaggtgaaatttttgggagagtaggttgaattcaatgtttttggttaaaagctttttactgtt  10801200                     <---------DAG2            --------->AHL20(2)           <---------ARR11(3)                                                        <---------WOX13(1)    ----------->GT1  <----------DOF2                                               -------->HAHB4  ---------->DOF2 <-----------GT1                            --------->TOE1(3)     --------->ATHB12 -------TOE1(3)  <-----------GT1                         ---------->DOF2          <---------YAB1 --ZAT6    --------->ARR11(3)                      <---------AHL20(2)             --------->ICU4 --------AG<---------AHL20(1)                      <---------YAB1          ----------->GT1 --------AGL1   --------->AHL20(2)                <---------AHL20(2)      ----------->GT1        ---- -GT1      --------->AHL20(1)    ---------->DOF2  --------->AHL20(2)    ---------->DOF2      -------- -------TOE2(3) <---------AHL20(2)               --------->YAB1       <---------HSFB2a(2)    <------ZmHOX2a(1)   aaggcaaagtaaaaatatttaaactttttcttatacaaagctaagcttgaattttaattcaaagcttaaattctaaaagttaaaatgattaactaggata  10801300                                                         --------->YAB1                                                   ------------>AtMYB77                                                <----------DOF2                                             xxxxxxxxxxxxxxxx>smallRNA(s)                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                       <---------------AtSPL8         --------->ARR11(3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <---------ARR11(3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------YAB1           ----------->GT1                     --------->ICU4 <---------ZAT6----------->HVH21--------->AHL20(2)--------->TOE2(3)                   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <-------GAMYB<---------AHL20(2) ------>DOF2--------->YAB1---------->DOF2   xxxxxxxxxxxxxxxx>smallRNA(i) <----------DOF2 <---------YAB1 ->YAB1  <----------DOF2<---------YAB1 --------------->AtSPL8   --------->YAB1--------->YAB1---------   aaagtttatgtctttgataactcattatcaaagcggtagagtttgtacaactttgacagttatcatttataaaatctttatcaaaaacgttataaaaagt  10801400  Previous    Next  AGI:  At1g30490.1    Description:  PHV (PHAVOLUTA); DNA binding / transcription factor. similar to REV (REVOLUTA), DNA binding / lipid binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G60690.1); similar to PHB (PHABULOSA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G34710.1); similar to ATHB-15 (INCURVATA 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G52150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73584.1); similar to class III HD-Zip protein 3 [Populus trichocarpa] (GB:AAX19052.1); similar to class III HD-Zip protein 4 [Populus trichocarpa] (GB:AAX19053.1); contains InterPro domain MEKHLA (Inter Range:  from: 10796117    to: 10800943    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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