Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------TGA1                                                                 <-----------HVH21         <----------DOF2                                        --------->ANAC55(2)     <---------ZAT18                                            <---------ANAC55(2)     --------->ZAT18              --------->AHL20(2)      <---------AHL20(2)     <---------ZAT14              <---------AHL20(2)      --------->AHL20(2) ---------TGA1a                  <---------AHL20(2)      --------->AHL20(2) -------->TGA1a           ----------->GT1         <---------ANAC55(2)              ---------->DOF2--- ---------O2             --------->DAG2           --------->ANAC58     <----------DOF2           <--- -------->O2            ---------->DOF2           --------->ANAC58<---------MYB52(1)      <----------   aaacgtgagcactttgatatataagataaagtttatttatttcccaaatgttacgaaaaattaattccgtcatctttttgttaacaaaagtttatcgata  10778800                                                                  --------->YAB1                                                                 <---------YAB1                                                   --------->AHL20(1)                                                   <---------AHL20(1)                                                  --------->AHL20(2)                     <----------DOF2                                          ----------->GT1       --------->AHL20(2)<---------AHL20(2)               --------->YAB1           ---------->DOF2         <---------AHL20(2)--------->AHL20(2) -------->GT1 <---------ATHB12   --------->AHL20(2)--------->AHL20(2)          <---------ICU4       < ------YAB1 --------->WOX13(1)   <---------AHL20(2)<---------AHL20(2)--------->YAB1   <-----------GT1 -GT1     ------>ZmHOX2a(2)--------->ANAC55(2)    <---------AHL20(2) --------->AHL20(2)  <---------DAG2   tgcttaaaatgatccaatcatcgaaatttaagtatttttttataaagtcaaattaaattttaaaattttaataatatttcaaaattatatactttttcat  10778900                                         --------->AHL20(1)                                         <---------AHL20(2)                                         --------->AHL20(2)     --------->AHL20(2)                 <---------ATHB12     <---------AHL20(2)           ---------->ID1                        <---------YAB1    --------->AHL20(2)           <-----------GT1                        <---------TOE2(3)   --------- ---------AHL20(2)      ----------->HVH21<---------AHL20(1)<-----------GT1                 <---------YAB1   cttaaatttaaaaatttgtgatttgtttgacattttttcccaataaaatatagtttcaatttttctattttgctaagatagcaatgtctgtttataatac  10779000                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                                   <---------AHL20(1)                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                --------->ANAC58   --------->AHL20(1)                  --------->AHL20(1)                            --------->ANAC58   --------->AHL20(2)                  <---------AHL20(1)                           --------->SPL7  <---------AHL20(1)                  --------->ARR11(3)                         <---------SPL7    --------->AHL20(1)                 <---------AHL20(2)                        <---------------AtSPL8 <---------AHL20(2)              <---------ICU4           ------->MYC3        <---------------AtSPL3 --------->AHL20(2)              <---------AHL20(2)       <-------MYC3 --------->AtMYB61         --------->AHL20(2)             --------->AHL20(2)  ------->GAMYB      --------->ZAT6            <---------AHL20(2)  --- >YAB1     --------->YAB1       <---------MYB52(2) --------->MYB46(3)  ----------->GT1  --------->ALFIN1   aaatttggatgtataataaatattttgtctcacaactaacacgttgaaaatcgaccactacttggtacgaaaatagcaaaataaattaatttggggcttt  10779100                                                                                       --------->HSFB2a(1)                                                                                       <---------HSFC1(2)                                                                                       --------->HSFC1(2)                           --------->AHL20(2)                                 --------->LBD16                         <----------DOF2                                     --------->ANAC46              <---------AHL20(2)                       --------->ZAT6        --------->ANAC58           --------->AHL20(1)                        *TSS                    --------->LBD16 ---------->DOF2         --------->TOE2(3)          <---------CCA1(2)        --------->ANAC58 ----DOF2 <---------AHL20(2)                <---------ANAC58                <---------LBD16 --ANAC58 --------->AHL20(2)                <---------ANAC58             <---------ALFIN1         --- --ANAC58<---------AHL20(2)<---------AHL20(2)    ------>ZmHOX2a(1)   -------->P       <---------TOE2(3) ------>TOE2(3)      <<<<<<<<<<GT-3b     <-----------RAV1(1)        <---------ALFIN1  <---------TOE1(3)   tcttaaagaaaattattttatatttttctttaattttgtgtttgtgtcgtccttctatctctaagaagcactacccctcccgcaattgaaggttctcttc  10779200                                                         --------->LBD16                                                 <-----------GT1                                            <---------ARR14(2)                             --------->GLK1(2)<---------ARR11(3)                            <---------GLK1(2) <---------AHL20(1)       --------->GLK1(2)                           --------->At4g35610--------->ARR11(3)      <---------ARR14(2)                           <---------At4g35610--------->AHL20(1)      <---------GLK1(2) ------->ID1           ------>ZmHOX2a(2)    --------->ARR14(2)        --------->ARR14(2)    <--------   gtcgctcacatccaatctctatcgatctcagattccaatttctgcgaatattttcttcccagagagattacagattctagggtttcgaatagttctttcc  10779300                                                                --------->ETT(2)                                                                <---------ETT(2)                                                          --------->GLK1(2)                                                          <---------ARR11(1)                                                          ------->TEIL                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                     --------->CCA1(2)                                                     --------->ARR14(1)                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                                    --------->ARR11(1)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                   <---------HSFB2a(1)                               <---------HSFB2a(1) --------->HSFB2a(1)                      ---------                               --------->HSFC1(2)  <---------GLK1(1)                        <--------                               --------->HSFB2a(1) --------->GLK1(1)                        ---------                       <---------LBD16 --------->STY1(1) <---------GLK1(2)                  <--------                      <---------LBD16 <---------MYB52(1) <---------ARR14(1)      --------->O2 --DOF2      <----------DOF2   <---------HSFC1(2) ----------->ARR10              <---------O2    ----   aatctagtcttcttccttttgtttctcgggcgaaatttcccttagggtttcgaagatccgaatctgtggacggagacaattcgacgtcttcttgagctgc  10779400                                                                                     <---------MYB52(1)                                                                                    --------->LBD16                                         <---------MYB52(1)                        <---------ANAC58                                        --------->LBD16                            <---------O2                                       <---------ANAC58                            --------->TGA1a                                       ==================================bZIP_DOF  <---------TGA1a                                       <---------TGA1a                        --------->ATERF1(1)                                       <---------ANAC58                       --------->At4g35610                                       --------->TGA1a                        <------NtERF2                                       ===========================================MYC_MYB                                       <---------O2                           <---------At4g35610                                  --------->ATERF1(1)                        <---------SPL7                                  --------->At4g35610                        <---------ATERF1(1)                                  <------NtERF2                             <---------ANAC46                                  <---------At4g35610                       <---------ANAC58                                 ------>NtERF2                            ------->GAMYB                                 <---------SPL7                         <---------At5g28300                                 <---------ATERF1(1)                   --------->MYB52(1)                                <---------ANAC58                       <-----------GT1 <---------ARR11(3)             <---------ANAC58                   ==========================bZIP_DOF --------->ARR11(3)             <---------ANAC46                   <----------DOF2 <---------ANAC58 >ZAT2                        ------->GAMYB                   <----------DOF2------>NtERF2 -ZAT2    <---------ANAC46    ===================MYC_MYB      ===============================bZIP_DOF >At4g35610                --------->MYB52(1)                <---------DAG2 <---------ANAC58 -At4g35610              <---------YAB1==================================bZIP_DOF  <---------ANAC46 ------>DOF2         <---------GLK1(2) <---------ANAC46   <---------ALFIN1===================MYC_MYB   aaagatgttctggcgaatggctggattatcaacggcgtctgccgtgagttttcttctccctcaccttttcttttaacggcgtctgccgtgagttttggga  10779500                                                          <---------YAB1                                                     ------->MYC3                                                     <-------MYC3                <---------At4g35610           ------>ZmHOX2a(1)                                  ----                --------->At4g35610       <---------ARR14(2)     <---------WOX13(1)          <-------       --------->ANAC58                ----------------------->TaNAC69(2)                    --------       --------->ANAC58          <---------MYB52(1) --------->ANAC46             <---------ZAT6  <---  --------->ANAC46           <---------At4g35610 <---------REM1(2)           <---------YAB1<---------LBD16   gaataagtcactccattgagatgagagttttagctgtttgtttgaatcctgtacacgtttcttattgatggatttagctattagtgtttcatttctgggg  10779600      --------->HSFB2a(1)      <---------HSFC1(2)      --------->HSFC1(2)      --------->ZAT2      --------->At4g35610      <---------HSFB2a(1)      <---------At4g35610               ----------->GT1      <---------ZAT2            <-----------RAV1(1)      <------NtERF2            --------->ARR11(3)            <---------WRKY18(1) ----->ARR14(2)              <---------ARR14(2)         --------->ARR11(3) --LBD16    ------>ZmHOX2a(1)--------->ARR14(2)    --------->AHL20(2)                              << ->LBD16    --------------------->WRI1  <------MYB83    <---------ARR11(3)                       ---- ------ARR14(2)    <---------YAB1       <------MYB46(1)<---------CCA1(2)              <---------YAB1   attttggcagcttcctctgtttttatagacgaatatgttggaaggtgaagagattatatatcttgaccagtaatgaagtgtcttcttgatgatatatgaa  10779700  Previous    Next  AGI:  At1g30470.1    Description:  SIT4 phosphatase-associated family protein. similar to SIT4 phosphatase-associated family protein [Arabidopsis thaliana] (TAIR:AT1G07990.1); similar to hypothetical protein OsI_002556 [Oryza sativa (indica cultivar-group)] (GB:EAY74709.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40415.1); similar to H0714H04.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66980.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain SIT4 phosphatase-associated protein (InterPro:IPR007587) Range:  from: 10779153    to: 10786648    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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