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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
<----------
DOF2
--------->
ANAC46
--------->
ZAT6
------>
MYB46(1)
<-----------
GT1
------>
MYB83
<---------
LBD16
--------->
AHL20(2)
<---------
ALFIN1
--------->
LBD16
--------->
ICU4
----------->
HVH21
<---------
MYB55(2)
--------->
ANAC58
------
TEIL
--------->
MYB46(3)
----------->
GT1
-----
At4g35610
<---------
ATHB12
<---------
ZAT2
--------->
ANAC58
---------->
DOF2
---->
At4g35610
--------->
WOX13(1)
--------->
MYB46(3)
--------->
YAB1
<---------
AHL20(2)
<----
ctacattcttgacatgttactccaatcaaacaaatacccacccagcttttatccgg
ctataacaacaacaagaaaaaattaacaccaaagtcgaaacctt
10645500
<---------
AHL20(2)
--------
--------->
AHL20(1)
<------
MYB83
<-------
--------->
AHL20(2)
<------
MYB46(1)
<--------
<---------
AHL20(2)
--------------->
AtSPL8
------->
GAMYB
<---------
AHL20(1)
<---------
WOX13(1)
-------->
P
--
<---------
AHL20(2)
--------->
ATHB12
--------->
ANAC58
--------->
AHL20(2)
<---------
ARR11(3)
<---------
At4g35610
--------->
WOX13(1)
--------->
AHL20(2)
--------->
ARR11(3)
---------->
DOF2
--------->
ANAC58
-------
HVH21
----------------->
AGL3
<---------
YAB1
--------->
At4g35610
--------->
GLK1(2)
----
tcacataaattaatttgattccaaaaacagagtaattgaagatttcgattggtac
catatcagaagaaatcaaagctgataatctagcaacccaatcatc
10645600
<---------
MYB46(3)
----------->
GT1
--------->
ALFIN1
--------->
At4g35610
--------->
ALFIN1
<---------
At4g35610
<---------
ANAC58
<---------
WRKY12
<---------
ANAC46
<---------
WRKY38(1)
<---------
ANAC58
->
YAB1
--------->
GLK1(2)
<---------
ANAC58
<---------
WOX13(1)
--
ICU4
<---------
HSFC1(2)
--------->
ARR11(3)
<--------
P
--------->
TOE2(3)
-
ATHB12
--------->
HSFC1(2)
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
TOE1(2)
------->
MYB46(3)
------->
TEIL
--------->
ZAT2
<---------
ARR11(3)
<-------
GAMYB
----->
MYB52(1)
<---------
AtLEC2
<---------
ZAT2
--------->
CCA1(2)
<---------
AtMYB61
<-
aacggctgatttcgatttagcatgaagcttctggtcaattgaagctggaggagactcagataagagcttgtgtgtggagatggttgatacaaccttggag
10645700
<----
-------
<------
-------
<---------
TOE1(2)
<------
<---------
TOE2(2)
<------
<---------
TOE2(3)
------->
MYC3
<-----------
ARR10
<-------
MYC3
--------->
ARR14(2)
<---------
ALFIN1
--------->
GLK1(2)
----------->
HVH21
<---------
ARR11(3)
<-----------
HVH21
<---------
HSFB2a(1)
===================
<------
MYB46(1)
--------->
HSFB2a(1)
--------->
TGA1a
<------
MYB83
<---------
ARR14(2)
<---------
ARR14(2)
<---------
At4g35610
---------->
DOF2
<----------
DOF2
--------->
ARR14(2)
<---------
GLK1(2)
--------->
At4g35610
--------
ZAT6
<---------
At4g35610
<---------
LBD16
<---------
ANAC46
<-----------
RAV1(2)
agtgatagaaagttggtgagaggctgcttctcgttgggaacatattcggagagaaggtttcggagaatcttaggtttcaatctcaggtcacacatgtcgt
10645800
---------->
DOF2
---------->
DOF2
-----------------
WRI1
---->
GT1
------>
NtERF2
---
bZIP60(1)
--------->
ANAC58
-->
bZIP60(1)
--------->
ANAC58
---
ANAC46
--------->
ANAC46
---------->
DOF2
---
ETT(2)
--------->
RAP2.6(2)
<---------
TOE1(3)
<---------
TOE2(3)
==================
bZIP_DOF
----------->
HVH21
<------
ZmHOX2a(1)
<---------
TOE2(3)
<---------
TOE1(3)
caaaacgctcaaaagacgccat
tgaagcagtgaaagagagatgtcgatgaagagaggagggtttttgtgagattagggttttttgtgagattagggtttt
10645900
*
TSS
------>
NtERF2
<-
<------
NtERF2
<---------
ARR14(2)
--
<---------
SPL7
--------->
ARR14(2)
<--
----------->
HVH21
<------
ZmHOX2a(1)
---
<---------
ANAC46
<---------
TOE1(2)
<---------
TOE2(3)
<------------
CBF
<---------
ANAC58
<---------
TOE2(2)
----------->
GT1
<----------
DOF2
--
<---------
ANAC58
<---------
ZAT14
<---------
TOE2(3)
--------->
GLK1(2)
<---------
MYB46(3)
<-----------
RAV1(1)
--------->
ZAT14
<----------
ID1
--------->
MYB52(1)
--------->
ATHB12
agaattgtggcggacagac
agacagaacagtcgtaggatttgagcttgttagagacaaaggtttaacgaataacgaatcaggctcggtttattggttgaa
10646000
<---------
ANAC58
--------->
GLK1(1)
<----------
TaMYB80
<------
NtERF2
<---------
GLK1(1)
--------->
RAP2.3(1)
----------->
GT1
--------->
CCA1(2)
--------->
LBD16
------>
NtERF2
<------------
CBF
<---------
ARR14(2)
--------->
LBD16
<---------
RAP2.3(1)
--------
AHL20(2)
---------->
TaMYB80
<---------
LBD16
<-----------
HVH21
------->
AHL20(2)
--------->
ARR14(2)
<---------
LBD16
<-----------
RAV1(1)
<-
-------
AHL20(2)
--------->
LBD16
<---------
At5g28300
<---------
DEAR3(1)
---
------>
AHL20(2)
<---------
LBD16
<---------
ZAT6
<---------
AHL20(2)
<--
------->
AHL20(1)
<-----------
GT1
<---------
ANAC58
------->
TEIL
------>
NtERF2
<------
ttaaattgaatcggtttattaaaccggatatacttgtcttgtgttaccccggatgtatataatgtcgccgctagacctagacattcagtacatgggttcg
10646100
<------
MYB46(1)
<---------
ARR14(2)
<------
MYB83
<---------
ARR11(3)
<---------
AHL20(2)
--------->
MYB59
--------->
ARR14(2)
--------->
AHL20(1)
<---------
AtMYB61
-----
ZmHOX2a(2)
<---------
TOE2(3)
<---------
AHL20(1)
<------
MYB83
------>
ARR14(2)
<---------
AHL20(2)
--------->
AHL20(2)
<------
MYB46(1)
-------
ARR14(2)
<---------
MYB52(1)
<------
ZmHOX2a(1)
<---------
AHL20(2)
-
TEIL
----------->
GT1
<------
ZmHOX2a(1)
<---------
ARR11(3)
--------->
AHL20(2)
gatcagttccattcgggctcgggtaattaagttagaggattttaggaactgtttcaatattttaaaagtttgattcgagtttaatttggtttggtttcag
10646200
<---------
ANAC58
<---------
ANAC58
<---------
ANAC55(1)
--------->
YAB1
<---------
ANAC46
-------->
HAHB4
<------
MYB83
<---------
YAB1
----
<---------
MYB52(1)
--------->
YAB1
--------->
ARR11(3)
------>
ZmHOX2a(2)
<---------
ARR11(3)
<---------
ARR11(3)
<------
ZmHOX2a(2)
--------->
AHL20(1)
--------->
AHL20(1)
<---------
ARR14(2)
------->
TEIL
----------->
GT1
<---------
YAB1
<------
ZmHOX2a(1)
<---------
AGP1
--------->
ARR14(2)
--------->
AHL20(2)
=================
--------->
ARR14(2)
<---------
ARR14(2)
--------->
AHL20(1)
<---------
TOE1(3)
<---------
CCA1(2)
<---------
CCA1(2)
--------->
YAB1
--------->
YAB1
<---------
TOE2(3)
<-------
TEIL
<------
MYB46(1)
<---------
AHL20(1)
<---------
YAB1
---------->
DOF2
---------
tacatgggttcggatctgtttggtttcgtgtatccaaaatatttggaaaaataataatagttatgataaatatacttaaaagtttaggatatattggtaa
10646300
--------------->
AGL15
<---------------
AGL15
<-----------------
AG
<-----------------
AGL2
<-----------------
AGL1
<---------
YAB1
<---------
YAB1
--------->
MYB52(1)
<-----------------
AGL3
<---------
AHL20(2)
--------->
AHL20(1)
---------->
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
-----------
------>
ZmHOX2a(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
YAB1
----->
ICU4
--------->
YAB1
<---------
ANAC55(2)
----------------->
AGL3
<----------
ID1
==========
HOX2a_HOX2a
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
-->
GT1
--------->
YAB1
<---------
YAB1
--------->
ANAC55(2)
<---------
ZAT6
<---------
AHL20(2)
ttttgatctaaagatgatcagagttataattttaattttaagtaactggattatattagtcttactatttttggtatataatttttggtattgggaaaaa
10646400
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AGI:
At1g30240.1
Description:
binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO14857.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024)
Range:
from: 10641083
to: 10645919
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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