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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(1)
<---------
ANAC58
<---------
ANAC58
--------->
AHL20(2)
--
<---------
ANAC58
------>
NtERF2
--------->
LBD16
-----
<---------
YAB1
------>
ZmHOX2a(2)
--------->
LBD16
--------->
TOE2(3)
------>
ETT(2)
<---------
ANAC58
<---------
HSFB2a(2)
--------->
YAB1
--->
ALFIN1
<---------
ANAC58
--------->
HSFB2a(2)
------->
TEIL
--
bZIP60(2)
<---------
REM1(1)
--------->
DEAR3(1)
----------->
HVH21
<---------
LBD16
<---------
CCA1(2)
tcgatattatgcttgttgtaccaatgctcgagccgagcgtgatcgatgccttgacaaactatatatgtttcccgaattaattaagttttgtatcttaatt
10618600
------>
MYB46(1)
--------->
MYB52(1)
------>
MYB83
-------->
P
--------->
MYB55(1)
--------->
DEAR3(1)
--------->
MYB46(3)
<---------
ICU4
<---------
MYB46(2)
--------->
ANAC55(2)
<---------
MYB111(1)
<---------
ANAC55(2)
<---------
MYB59
--------->
CCA1(2)
<---------
MYB55(2)
--------->
ARR11(3)
<---------
At4g35610
<---------
ARR14(2)
<---------
ATERF1(1)
--------->
ARR14(2)
----------->
TBP
--------->
At4g35610
<---------
ARR11(3)
<-----------------
AGL3
<---------
MYB111(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
LBD16
<---------
YAB1
--------->
ANAC58
<---------
AHL20(2)
------>
NtERF2
--------->
AHL20(2)
<---------
At4g35610
--------->
YAB1
<---------
ANAC46
--
<-----------
GT1
--------->
ANAC58
------>
ZmHOX2a(1)
<------------
CBF
<-
------->
YAB1
----------->
GT1
----------->
ARR10
--------->
AHL20(2)
<---------
LBD16
<---------
ARR11(3)
---->
YAB1
<-----------
GT1
--------->
ANAC58
------->
TEIL
<-----------
GT1
<---------
LBD16
<------
ZmHOX2a(1)
agaataacatttttatacaatgtaatttctcaagcagacaagatatgtatcctatattaattactatatatgaattgccgggcacctaccaggatgtttc
10618700
<---------
bZIP60(1)
--------->
ANAC55(2)
--------->
bZIP60(1)
<---------
ANAC55(2)
<---------
bZIP60(2)
----------->
TGA1
<---------
ICU4
<---------
ANAC58
<---------
AHL20(1)
--------->
YAB1
<---------
GLK1(2)
--------->
AHL20(1)
---------->
DOF2
--------->
GLK1(2)
<---------
AHL20(1)
--------->
ANAC58
----------->
RAV1(1)
--------->
AHL20(1)
--------->
ANAC55(1)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
MYB52(1)
------------>
CBF
<---------
ARR11(3)
------------>
CBF
<---------
AHL20(2)
------->
ARR14(2)
--------->
ANAC46
<----------
ID1
<---------
ANAC58
--------->
YAB1
--------
ARR14(2)
--------->
ANAC58
----------->
HVH21
<-----------
HVH21
------------>
CBF
-----
aaatacgagagcccattagtttccacgtaaatcacaatgacgcgacaaaatctagaatcgtgtcaaaactctatcaatacaataatatatatttcaaggg
10618800
------->
GAMYB
--------->
ANAC46
--------->
ATHB12
--------->
YAB1
<------------
ATHB5
<------
ZmHOX2a(2)
<--------
ATHB1
<---------
ARR11(3)
------->
GAMYB
--------->
ICU4
--------->
ANAC46
--------->
YAB1
-----
<---------
ATHB12
----------->
TBP
--------->
ARR11(3)
<---------
ALFIN1
------------>
CBF
------->
TEIL
--------->
REM1(1)
--------->
WOX13(1)
<------
------>
ZmHOX2a(1)
--------->
ANAC58
---------->
DOF2
<------
ZmHOX2a(1)
----------->
RAV1(1)
------->
CBF
--------->
ANAC46
--------->
ANAC58
<---------
AHL20(2)
---------->
DOF2
--------->
MYB46(3)
caatttcgacttctcctcaactcaatgattcaacgccatgaatctctatataaaggctacaacaccacaaaggatcatcagtcatcacaaccacattaac
10618900
----------->
GT1
<---------
ANAC55(2)
<---------
ANAC46
--------->
TOE1(1)
<---------
ANAC46
--------->
TOE2(1)
---------->
DOF2
----------->
HVH21
--------->
GLK1(1)
--------->
HSFB2a(2)
---->
ZAT6
<---------
ANAC58
---------->
DOF2
<---------
HSFB2a(2)
---
-----
GT1
------------>
CBF
<---------
ANAC58
--------->
ARR14(2)
------>
ZmHOX2a(2)
--------
tcttcaccactatctctcaatctctcgtttcatttcttgacgcgtgaaa
atgacagaaatgccctcgtacatgatcgagaacccaaagttcgagccaaag
10619000
<---------
YAB1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
HSFB2a(2)
--------->
ARR14(2)
<----------
DOF2
<---------
ARR11(3)
<-----------
GT1
<---------
ARR14(2)
------>
ZmHOX2a(2)
--------->
ARR11(3)
----------->
GT1
<-----------
GT1
<-------
TEIL
--------->
ANAC55(2)
------>
MYB52(1)
<---------
ANAC58
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ZAT6
<----
-->
DOF2
<---------
YAB1
<---------
ANAC58
<---------
ARR11(3)
--------->
ARR11(3)
<-----------
GT1
--
aaacgacgttattactcttcttcgatgcttaccatcttcttaccgatcttcacatacattatgatctttcacgttttcgaagtatcactatcttcggtct
10619100
<-----------------
AGL3
<------
NtERF2
--------->
LBD16
------>
NtERF2
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
RAP2.3(2)
--------->
MYB46(3)
--------->
ERF1
--------->
RAP2.3(1)
---------->
DOF2
<---------
ICU4
<---------
ARR11(3)
------>
ZmHOX2a(1)
--
---------->
DOF2
--------->
At4g35610
<---------
YAB1
<---------
YAB1
---------->
DOF2
---
------
DOF2
--------->
ARR11(3)
--------->
TOE2(3)
<---------
TOE2(3)
<----
-------->
DOF2
<---------
At4g35610
--------->
YAB1
<---------
ATHB51
--------->
YAB1
<--------
ttaaagacacaaaggtcttgttcttcatctccaatactctcatcctcataatagccgccgattatggttccttctctgataaagagagtcaagactttta
10619200
<------
NtERF2
<------
NtERF2
<---------
ICU4
<-----------
HVH21
--------->
ZAT2
<---------
ZAT14
--------->
ARR14(2)
------->
At5g28300
--------->
RAP2.6(2)
<---------
ZAT2
<---------
GLK1(2)
<--
-------->
GT1
<---------
At4g35610
<---------
At4g35610
---------->
DOF2
-----
At5g28300
--------->
At4g35610
--------->
At4g35610
--------->
MYB52(1)
----------
--
DOF2
<-----------
RAV1(1)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ZAT6
-----
cggtgaatacactgtcgcagcggcaacgatgcgaaaccgagctgataactactctccgattcccgtcttgacataccgagaaaacactaaagatggagaa
10619300
<-----------
GT1
<-----------
ARR10
<---------
ARR14(2)
--------->
ARR14(2)
--------->
GLK1(1)
--------->
DEAR3(2)
<---------
ANAC58
--------->
MYB46(3)
<---------
ANAC58
---------->
DOF2
------->
TEIL
<---------
GLK1(1)
--------->
TOE1(3)
--------->
MYB52(1)
<---------
ANAC46
-------
ATHB12
<------
ZmHOX2a(1)
<---------
ARR14(2)
<---------
YAB1
--------->
LBD16
->
GT1
--------->
TOE2(3)
<---------
LBD16
<----------
ID1
--------->
ARR11(3)
--------->
LBD16
---->
GLK1(1)
--------->
ARR11(3)
>>>>>>>>>
TBF1
<---------
ARR11(3)
------>
ZmHOX2a(1)
-
atcaagaaccctaaagatgtcgaattcaggaaccctgaagaagaagacgaaccgatggtgaaagatatcatttgcgtttctcctcccgagaaaatagtac
10619400
<---------
ANAC58
------
<---------
ANAC58
------
--------->
STY1(2)
------
--------->
ANAC55(2)
<---------
ANAC58
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
------->
TEIL
<---------
HSFB2a(2)
--------->
HSFC1(2)
<---------
MYB46(3)
<---------
REM1(1)
--------->
HSFB2a(2)
<---------
HSFC1(2)
-------->
ALFIN1
<---------
At4g35610
--------->
ANAC46
<---------
STY1(2)
----------->
RAV1(1)
gagtggtgagtgagaagaaacagagagatgatgtagctatggaagaatacaaaccagttacagaacaaactcttgctagcgaagaagcttgcaacacaag
10619500
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AGI:
At1g30190.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G34610.1)
Range:
from: 10618950
to: 10619786
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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