Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ---------->DOF2                                           --------->At5g28300                                          ----------->GT1                                       <----                                   --------------->AGL15                                  <----------         <---------ANAC46          <---------------AGL15                             --------->ANAC58         <---------ANAC55(2)      ----------------->AGL2       <---------ANAC58      --------->ANAC55(2)       --------->AHL20(2)      <---------ARR14(2)              <---------ANAC58      --------->ANAC58 ------>DOF2                   --------->ARR14(2) ---------->DOF2        ----------->GT1 <---------YAB1   gaagcaaaattacttatatagagccgataaccatatactatatacagtaaaagaaagggctagtttcttacaagtgtgtaatatgacaagtattgttgtt  10412600                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                    <---------ARR14(2)                                       <---------ANAC58                             --------->ARR14(2)                                       <---------ANAC58                             --------->ARR11(3)                            <---------MYB52(1)                                      <---------ARR11(3)                 <---------YAB1  ---------->ID1                                     ------->TEIL  <--    ----------->HVH21   <---------At4g35610     <---------ARR11(3)    <----------DOF2 ------>ZmHOX2a(2) -----MYB46(3) <---------At4g35610  ------>ZmHOX2a(1)       <-----------GT1 <----------ARF1 <-------- -RAV1(1)<-----------HVH21<----------DOF2       --------->ARR11(3)<---------GLK1(2)<---------CCA1(2)   gttgaaatgacagtcacatctgattgtgctgttttgtccttccttgagaacatcttgagttataaccagagtctttgtgagacatggatcttcacttagg  10412700                                  ---------->DOF2                                 ------>ZmHOX2a(1)                                --------->TOE1(3)                                                 <-- ---TOE1(2)                  --------->ARR11(3)                 --------->YAB1                  ----- ---TOE2(3)                  <---------ARR11(3)              --------->WOX13(1)                 <---- ---TOE2(2)                  --------->ARR14(2)           --------->ANAC58          --------->At4g35610 -->MYB59                    <---------ARR14(2)           --------->ANAC58          <---------At4g35610 -----TEIL        <-----------HVH21                  <----------ID1          --------->DAG2  -------- -MYB52(1)       <---------ZAT6 --------->TOE2(3)  ---------->DOF2          ---------->DOF2 <-------TEIL   ttcaagtgtttcacaccgagtgtcaatgcaatatccttaagcgcttccactggaaaagacaaacaatcagaaacacaataaagttaagctcaaattcata  10412800                                                             <---------At4g35610                                                             --------->At4g35610                                                             <-------TEIL                                                             --------->ZAT14                                                             --------->ZAT18                                                             <---------ZAT14   --------->ANAC46                                         --------->ALFIN1             --------->ZAT14   --------->ANAC58               --------->At5g28300 ----------->RAV1(2)                <---------ZAT14   --------->ANAC58              ----------->GT1      <---------At4g35610              <---------ZAT14 --------ID1               <---------AHL20(2)         --------->At4g35610            <---------------AtSPL8 ----->DOF2             --------->AHL20(1)          --------->REM1(1)              <-----------GT1 -----ICU4              <---------AHL20(1)       --------->TOE1(3)           ----------->GT1 ->YAB1                --------->AHL20(2)        --------->TOE2(3)    <------ZmHOX2a(1)--------->ZAT14   aagacaagccattttgttttggcaaatatataatgcagtaaaaccactaaaccttcatctgggtgcagagaaggagaagcagataatactgtacagacca  10412900                                              --------->ANAC46                                             --------->HSFB2a(2)                                         <---------ARR14(2)                                         --------->ARR14(2)                                        --------->ATERF1(1)                                        <------NtERF2  <---------ICU4                                       ------>NtERF2   --------->YAB1                                       <---------ATERF1(1)                                       <---------RAP2.3(1)                                      <---------DEAR3(1)                                      <---------RAP2.6(2)                                      <---------RAP2.3(2)                                      <---------RAP2.3(3)                                   --------->DAG2     <---------YAB1--------->At4g35610                                 ---------->DOF2     --------->ARR11(3)--------->At4g35610          -                            ----------->GT1  <---------HSFB2a(2)    <---------At4g35610           <--                            --------->At4g35610      <---------ARR11(3)<---------At4g35610        ---                            <---------At4g35610    --------->ICU4   --------->ZAT2      <---------ANAC46   --------->CCA1(2) <---------ZAT14 --------->RAP2.6(3)            <---------ZAT2  --------->ARR11(3)   agtagataagagtaagaacagagagtagagagctaaaaaggcggcttcgcgacatgatcatgagcttgtaagctgcagacattgaagattatgtgcaagt  10413000                                    <---------ICU4                            --------->MYB59                             --------------->AtSPL8                         <---------MYB52(1)          <---------ANAC55(2)<---------------AtSPL8                       <---------ZAT6      -------     --------->ANAC46     ------->TEIL                                 <-----------GT1   <-----------TBP ----->ZmHOX2a(2)      <---------ANAC55(2)     --------->AHL20(2)     <---------YAB1     --------->AHL20(2) -------ARR11(3)       <---------ANAC46    ---------->DOF2          <---------ICU4     <------------- ------>ARR11(3)  --------->ZAT6   --------->ICU4                 <----------DOF2    --------->YAB1<-   gatctatacatcacttgaaaacactacgtatatagtactaatttctaaagaaaataactaaaactcttctttattacagttagataatcatatatataga  10413100                                                                                        --------->LBD16                                                                                        ----------->GT1                                                                            <---------ANAC58                                                                        <---------At4g35610                                                                        <-------GAMYB <---------LBD16                                                                       --------->MYB52(2)                    <---------ANAC58                                   <-----------RAV1(1)     ---------->DOF2<---------ANAC58                                   <---------DEAR3(2)   <---------YAB1   <---------ANAC46                      <-----------GT1<---------MYB52(1) ---->GT1      <---------bZIP60(2)        --------->TOE1(3)            <---------MYB46(3) --AGL15    ----------->HVH21             --------->TOE2(3)    <-------MYC3 <---------ANAC46 -----------CBF<---------ANAC46          --------->At4g35610   ------->MYC3 <---------ANAC58   <-----   aaattgtgaaagatgtgaagtgtcttgaaatgaagtttgactaagcttaaattaagagttttacacatggggtctgttgcttgttaaacccggataaatg  10413200                  --------->AtLEC2                  --------->ANAC46                <---------ANAC58                <---------ANAC58               --------->ZAT14          <---------At5g28300                                                             <---------ANAC58         <-----------GT1                                           <------------CBF       <---------ANAC58   <----------DOF2--------->ANAC58           --------->ZAT6<---------HSFB2a(1)      <----------DOF2<-   <---------DAG2 --------->ANAC58         <-----------GT1--------->GLK1(2)    <-----------GT1     -- ----REM1(1)   <---------ZAT18     <---------AHL20(2) <------ZmHOX2a(1) <---------At4g35610        ==   tagcacttttgttacagtgcatgcaacctctctgtttttatttgtttacagtatgaggagaacctttgaaattgagcttattcacccttttagcttgcat  10413300                                                                                   --------------->AGL15                                                                                <-----------GT1                                                                              <-----------HVH21                                                                          <---------ICU4                                                                          --------->ATHB12                                                                          --------->ATHB51                 <---------HSFB2a(2)                                     --------->ICU4                 --------->HSFB2a(2)                                     <---------YAB1           <---------------AGL15                                       <--------HAHB4           ========================================================================================MADS_MADS           --------------->AGL15                                      --------->ICU4     --------------->AtSPL3                                      --------->ANAC46  <---------ALFIN1 --------------AGL15               ----------->GT1       <---------YAB1<---------ICU4    --------->HSFB2a(2) ------------->AGL15             ---------->DOF2         --------->ICU4--------->YAB1    <---------HSFB2a(2) ==========================MADS_MADS    <-----------GT1--------->YAB1 <---------YAB1  <----------DOF2   tctacttgtagtactactactagaagagcatacttaaaagttaaaccttgtgagaattcatgattctaagtcatcattattgtcaccactttcagaaaaa  10413400                                                   <---------ANAC58                                                   <---------ANAC58                                              --------->ALFIN1                                              <---------bZIP60(2)    --------->YAB1        <---------MYB52(1)  --------->YAB1                            <------ZmHOX2a(1)   --------->MYB46(3) <--------P       -   cctttcataaacaactctaattttagatgtttagtcccaattcgaaggatgtggctagttttgtcaacaaatgaaaattggaggggttgatcagttttgt  10413500  Previous    Next  AGI:  At1g29740.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G29730.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G07650.1); similar to RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G29750.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39466.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48003.1); contains InterPro domain S Range:  from: 10407365    to: 10412982    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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