Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------>ZmHOX2a(1)                                                                       <---------------AGL15                                                                      --------->TOE2(3)   <---------ZAT6                                                              <---------AHL20(2)          <---------ANAC46 ------>NtERF2                      --------->TOE2(3)         --------->AHL20(2)<------ZmHOX2a(1) ---------RAP2.6(2)        ---------->DOF2              ----------->GT1--------------->AGL15   tggcgacttccctaatgtattacatagtctaaagaaaaacttaaatttctaactcaaatagtatttaaatttcctcaaataaggagcaagtagtgtatgg  10028700                                                                                 --------->MYB52(2)                                                                  --------->ATHB12                                                                  --------->ATHB51                               ---------->DOF2                   <---------YAB1<--------P                     <---------MYB59        ----------->RAV1(1)--------->YAB1  <---------MYB52(1)   agccaatagcattgaagaaaatgcctaattttctaaagcatatgtgcaacaaaaaaaaaaaaaaaacataattgaactctggttagtttagaaaacaaaa  10028800                                                                             ---------->DOF2                                                                          ===========================                   --------->ANAC46                                       --------------->AGL15                 --------->ANAC46   --------->AHL20(2)         --------->AHL20(2)----------->GT1               <-----------GT1      <---------AHL20(2)         <---------AHL20(2)<----------ID1    --           --------->AHL20(2) <---------AHL20(2)        --------->TOE2(3) <---------------AGL15  ----         <---------GLK1(2) ----------->GT1      <---------AHL20(2) <---------AHL20(2)            ----     ---------->DOF2----------->RAV1(1)        --------->AHL20(2)  --------->AHL20(2)         <------   caaaaaaaaaagattatttacacaacaaatagtaaattttaaatgctcatttaatatttcttaatataaataaatgctataaagagaaaaaatgaacaat  10028900                                                              --------->TOE2(3)                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                     --------->TOE2(3)                                                    <---------ICU4                                                    --------->YAB1                                                    <--------HAHB4         --------->GLK1(2)                          --------->ATHB12    ---------->DOF2                                <---------ATHB12 =========MADS_MADS                                <---------YAB1           --------->ANAC46       -- -------->DOF2                                     --------->ICU4   <---------ICU4            <------ ----->YAB1 --------->TOE2(3)                    --------->YAB1------>ZmHOX2a(1)             <------- ----->AHL20(2)    <-----------GT1            --------->YAB1  --------->TOE1(3)          --------->ICU4 ---------AGL15--------->YAB1        <---------AHL20(2)--------->AHL20(2)   <---------ALFIN1 --------   aaaaagaaaagaatccataataaacagtccaaatggcatttttttccaaaataatcattaaattccttaaacatttccccacaatttgataatttttaaa  10029000                                                        --------->DAG2                           <---                                                  ---------->DOF2                     --------->ANAC46                                              <----------ID1    ----------->GT1       --------->ANAC58 ------->AHL20(2) <---------ICU4             ----------->GT1   <---------MYB46(3)     --------->ANAC58 ---AHL20(2)      <---------------AtSPL8   ---------->DOF2 --------->ALFIN1       --------->ARR14(2) --AHL20(2)   --------->AHL20(2)       <---------------AGL15  <---------ANAC46    <---------ARR14(2) ->AHL20(2)--------->YAB1         <---------At4g35610  ---------->DOF2            --------->GLK1(2)   tttttatattttctcataaattagtacattgaatttagctcataaaaaaggaaaaagaaaagtggagggtgaagagaagaagagaatccagcaacgtttc  10029100                                                                                                  ---                                                                                                 ----                                                          <-----------GT1                        <---                                                       <---------ICU4                            <---                                     <----------DOF2  --------->ICU4                            <----                           <---------GLK1(2)        <---------ICU4                            <------      <----------DOF2      <---------ICU4        --------->YAB1                       <----------DOF2  <-----------GT1       --------->YAB1       <---------AHL20(2)                       --------------- -------DOF2       <-----------GT1  *TSS <---------AHL20(2)                <---------ICU4 <---------AHL20(2)   tttatttcctttgtgtttttttttcttcataatctctctctttttatttattcataatttttactctctccatttcttcattactcttctttttattttc  10029200                                                                                                  <--       ---------->ID1                                                                             <--      <-----------GT1                                                                         <------NtERF2  --------->ARR11(3)                                                                        ---------  <---------ARR11(3)                         <---------ZAT14                                <-------- ------>LBD16                             <---------At4g35610                               <-------- ----->HSFB2a(2)                       <---------At4g35610                                  ========= ------HSFB2a(2)                    --------->At4g35610                                     --------- ------ANAC46                       <---------At4g35610                               --------->GLK1(2) -----LBD16            --------->MYB52(2) --------->At4g35610                         --------->ARR11(3) -----GT1  <----------DOF2         <-----------RAV1(1)                                <---------ARR11(3) ------>WRI1     <----------DOF2<----------DOF2  <---------ZAT6 <---------LBD16      <---------GLK1(2)   cggagatttttctctttgcctttgttatttgctgcttttgctgcagctacagtgtaagtttgattttctgggttccttcaaactccaaaatctcgcgtcg  10029300 -------DAG2                                                            <---------ANAC58 --------DOF2                                                           <---------ANAC58         <--- >O2<---------ANAC58                              <-----------GT1       <---------ANAC46         <--- -TGA1a    --------->GLK1(2)                 <----------DOF2            <---------ANAC55(1)      <--- -O2<---------ANAC58                   <---------MYB52(1)     --------->ATHB12               <------- ========bZIP_DOF                    <-----------RAV1(1)     <---------YAB1                 <-------- >TGA1a   <---------GLK1(2)         ------>ZmHOX2a(2)      <---------AtLEC2      <---------ARR14(2)   ctttttgcttcagaatcgatttgttcttgttacttcgatctgttgttctttttaactctgtgcatgattcaatttcgtgttcgtaacctgttttttgctg  10029400                       --------->AHL20(2)                       <---------AHL20(2)                                                         <--                 <------MYB46(1)                --------->ARR11(3)                                <--                 ----------->GT1 <------ZmHOX2a(2)  <----------DOF2                 <------ZmHOX2a(2) ------ANAC58    <---------ANAC55(2)            <---------ARR11(3)                 --------->ARR11(3) ------ANAC58    <------MYB83   --------->ARR14(2)  ------>ZmHOX2a(1)              <---------ARR11(3) ------ANAC46   <---------TOE2(3)==========================HOX2a_HOX2a          <---------HSFB2a(2) --At4g35610    --------->MYB59 <---------ARR14(2)------>ZmHOX2a(2)             --------->HSFB2a(2) - ---RAV1(1)     --------->MYB46(2)            <---------YAB1        <---------At4g35610        <-----   cttgtttagttcgacaattaggtaaaaaaatgacgatccctaaaacttatgatccttttaatcttcgtttagctacttcgttcgagatcatctagggctt  10029500                                                                                       --------->ARR11(3)                                                                                  --------->ATHB12    <----------DOF2                                                            --------->YAB1   <---------ANAC58            --------->At5g28300                            <-------TEIL   <---------ANAC58           <---------ZAT6                               --------->ATHB12 ---------RAV1(1)           <---------At5g28300                            <--------ATHB1 -------MYB46(3)           <-----------GT1                                <---------ATHB12       <--- --------->ID1           <---------WOX13(1)          --------->ANAC55(2)  --------->ICU4   <---------YAB1 -----DOF2            <---------YAB1     <---------AtMYB61           ------->TEIL<---------YAB1<-----   ttgttgcttcatcgattttgggttttgatttactgtaaatgttttggttttgtttatgtaatctaagcatgtaccaatgattcatgagtgatcatgtttg  10029600  Previous    Next  AGI:  At1g28520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66378.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69825.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71043.1) Range:  from: 10029136    to: 10031976    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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