Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <------NtERF2                                                      ----------->GT1                                                      --------->LBD16                                                     <---------ANAC58                                                     <---------ANAC46                                                     <---------ANAC58                                              <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <xxxxxxxxxxxxxxxxsmallRNA(i)                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                              <                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    <-------GAMYB                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     ---------                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      ---------                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                      ---------                                 ----------->ARR10  <---------LBD16                         <--------                                <--------P  <-------TEIL                            xxxxxxxxxxxxxxxx>smallRNA(i)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    <xxxxxxxxxxxxxxxx                           <------ZmHOX2a(1)--------->ZAT18    <---------DAG2   --------->ZAT18     x          --------->ARR11(3)  ----------->GT1<xxxxxxxxxxxxxxxxsmallRNA(i)       <---------ZAT14 <xxxx          <---------ARR11(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <-----------GT1    xxxxxxxxxxxx -----ZAT18            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <----------DOF2 xxxxxxxxxxxxxxxxxxxxxx   cacatttttgaagctcttctaaatcactaggagggtagataccaagtgcatagtggcggataaaactttttttttcaaattgtgcaatgctagtttgttg  10023500                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 <-----------RAV1(1)                 <---------ATHB12                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxx>smallRNA(i)    <----------DOF2        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    xxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------HSFC1(2)                   <xxxxxxxxxxxxxxxxsmallRNA(i) --------->HSFC1(2)             xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<-----------HVH21 >MYB52(2)   <---------YAB1<xxxxxxxxxxxxxxxxsmallRNA(i)                       <----------DOF2 >MYB111(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                             ------>ZmHOX2a(1) >MYB55(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <---------ARR11(1) -MYB46(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<----------DOF2             --------->ARR14(2) xxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <----------DOF2 xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxsmallRNA(i)         <---------ARR14(2) xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ----------------------->TaNAC69(2)       -- x>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------AtMYB61  <---------CCA1(2)<----------DOF2   ggatgtttcttcattttcaatggtgctcgatgctctcggtcactttgacttttgtttaggtgttatctttttctcgtatccttttgctctctctttcact  10023600                                 ---------->ID1            --------->GLK1(2)                               <-----------RAV1(1)<---------ANAC46                               <---------MYB46(3) <---------ANAC55(1)                <---------ICU4            <---------YAB1<---------AHL20(1) <---------MYB46(3)                 >>>>>>>>>>GT-3b        <----------DOF2  --------->YAB1      --------->MYB52(2)         <---------ARR11(3) -------->ID1         --------->YAB1   <----------DOF2   --------->ICU4<---------CCA1(2)     --------   tgttccatttctttttgattaaactcataatatttgttgctctttgtttgttacatgtaataatctattctatatatctaagaaaaatacttacaaaaag  10023700                                   --------->MYB59                           ----------------->AGL3                           <-----------------AGL3                         --------->RAP2.6(2)                         ------->GAMYB     --------->YAB1      --------->ANAC46                 --------->ARR11(3)    <---------YAB1       --------->DEAR3(1)           ---------->DOF2                --------->YAB1  <---------ICU4        --------->DEAR3(2)  <---------AHL20(2)                   --------->MYB46(3) <---------YAB1         --------->MYB46(3)  --------->AHL20(2)                <----------ID1 --------->ICU4       --------->ARR14(2)   --------->AHL20(2)               <---------------AtSPL8 -->DOF2              <---------ARR14(2)<----------DOF2<---------TOE2(3)---------->DOF2   aacattattatcacatatgcacagaaaccgccaaaattgggtcttttaaattagattaaagaaattgaacttgacaaagaagaacaaacaaaatagaggg  10023800                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                           ---------->DOF2                                        --------->MYB52(1)                  --------->DAG2                                                  ------>MYB83                 ---------->DOF2                                         ======================HOX2a_HOX2a            <---------AHL20(2)                                           =======================HOX2a_HOX2a            --------->AHL20(2)                                *TSS       ------>ZmHOX2a(1) --------->LBD16            --------->AHL20(1) <-----------------------TaNAC69(2)  <<<<<<<<<TBF1  ------>MYB46(1)      --------->LBD16 ----------->GT1       --------->MYB52(1)<----------DOF2   --------->MYB46(3)   gtctattccacaaataaaataaagttgtaaaaagacgacccaaacaaaacgactcaacttctctctttcttcttcctcttcaccaatcggatccacgaaa  10023900                                                                  --------->ARR14(2)                                                           --------->At4g35610                                                           <---------At4g35610                                                     ------>MYB83<---------CCA1(2)                                                   --------------->AGL15                                                   <---------MYB59<---------ARR14(2)                                   <---------TOE2(3) ------>MYB46(1)                           >>>>>>>>>>>>>>>>>LFY    <---------MYB46(2)                        --------->ARR14(2)        ----------------->AGL3 >ANAC58           ------>ZmHOX2a(2) ----------------------->TaNAC69(2)                      -------- >ANAC46      <---------WOX13(1)<---------ATHB12  <-----------------AGL3                    <-------- >ANAC58 --------->TOE2(3) <<<<<<<<<<<<<<<<<LFY   --------->ANAC55(2)       <---------SPL7-----------   aattcgataaacctcgattgatcccaaattcccaatggaggtttctgttctcacctaatttagctccatatccctcgcagtccgattcaagtgagattct  10024000                                                                                                   <-                                                                                                   --                                                       <------NtERF2                              ---                                                      <-----------HVH21                           ---                      --------->ALFIN1                ------>NtERF2                         ---------                      <-----------RAV1(1)            --------->RAP2.3(3)                   --------->ANAC58                      <---------REM1(1)              --------->DEAR3(1)               --------->At4g35610                 <---------ICU4               <---------ALFIN1                        <---------ZAT2                 --------->YAB1              --------->ZAT18                          <---------At4g35610        --------->HSFB2a(2)          ------->TEIL   --------->RAP2.3(1)               --------->ZAT2 ->GLK1(2)      --------->ICU4<---------MYB52(1)  --------->ANAC46             <---------ANAC58   --- -GLK1(2)     --------->YAB1 <-------GAMYB <---------ZAT18               --------->ATHB12  --------->ANAC58 >ARR10 <---------HSFB2a(2) <---------ANAC46 <---------ZAT18  --------->TOE1(3)<---------ANAC58   ---   tctaagttttttggaagaataatggtgttgccgttgatgaaactgggcacactcgccgtcaaaaccataagtaaaccattggctagtcagctcaagcacc  10024100       <-------TEIL   <---------TOE1(3)                                                                            -----   <---------TOE2(3)                                       ------>ZmHOX2a(2)                <-------- --------ZAT2                                             <------ZmHOX2a(2)               --------->MYB52(2) ------->ZAT2                                            --------->ARR11(3)               <---------MYB46(3) ------>ANAC58              --------->WOX13(1)           <---------ARR11(3)              <-------TEIL ------>ANAC58          --------->WOX13(1)               --------->ARR14(2)             --------->GLK1(2) >MYB46(3)           --------->TOE2(3)                   <---------ARR14(2)             --------->ARR14(1) --->MYB46(1)       <---------ANAC46        <-----------RAV1(2)                        <---------GLK1(2) --->MYB83    <---------TOE1(2)--------->YAB1 ----------->GT1------>ZmHOX2a(1)  <----------DOF2<-----   aagctaaggttcatcccaagtttcgtcaatctatcatcaacttcgctcaggtaaattgggatcctctctgattctaaactcgcttttgagattcgttgcg  10024200                                                                                  <------MYB46(1)                                                                                  <------MYB83                                                                                  ----------->GT1                                                                                 --------->MYB59                                                                                 --------->MYB46(2)                          <---------ZAT2                                       <---------MYB52(1)                          --------->At4g35610        <---------TOE2(3)       <---------MYB46(3)                      <---------ARR14(2)      --------->LBD16               --------->ALFIN1                      --------->ARR14(2)     --------->ANAC55(2)            <------NtERF2                      --------->GLK1(2)      <---------HSFB2a(2)          <---------ANAC58              <----------DOF2               <---------LBD16               <---------ANAC46             <---------ANAC58              --------->MYB52(1)             <---------ANAC58         <---------ANAC58 <---------At4g35610--------->HSFB2a(2)       --------->DAG2  --------->YAB1     <---------GLK1(2)   <---------HSFB2a(1)          --------->DAG2 ->NtERF2<---------ANAC58 --------->ZAT2 --------->HSFB2a(1)         ---------->DOF2            <---- -MYB52(1)   <---------ANAC58       <---------HSFB2a(2)         <---------HSFB2a(2)             ----- ----ANAC46  <---------ANAC46       --------->HSFB2a(2)         --------->HSFB2a(2)           <------   cctataatatgtcttgcgttttcgattctgctgagtttttggaacttccggaatataggttttgttacagaaaaaggcgtggttaggttaatagttgaga  10024300                                                                                                    -                                                                        --------->ANAC58            -                                                                        --------->ANAC58            -                                                           --------->YAB1                        ----                              <-----------RAV1(1)         <---------HSFB2a(1)              <---------ARR14(2)                              --------->ALFIN1            <---------HSFC1(2)              --------->CCA1(2) -----ARR11(3)  ------>ZmHOX2a(2)             ----------->HVH21    <---------ICU4---------->DOF2<---- ---->ARR11(3)<---------ARR11(3)            --------->ANAC55(2)   <---------ATHB12     ----------->GT1 ---TOE2(3)   --------->ARR11(3) <---------MYB46(3)    <------ZmHOX2a(1)--------->ANAC46<------ZmHOX2a(1)   tttttgctagttttgtgatcttgaaatttgatgtgttgttggatttatgtgaccagaggaatcatcgaatcactacgcaaatgcaaagaaggatatatgg  10024400  Previous    Next  AGI:  At1g28510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66379.1); contains InterPro domain Optic atrophy 3-like (InterPro:IPR010754) Range:  from: 10023862    to: 10026281    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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