Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ----------->GT1                                               <-        <----------CDC5            <---------ANAC58                         <---------At4g35610   <--     <---------PCF2                <---------ANAC58               --------->YAB1                ----- ----->YAB1                        <---------ANAC46               ----------->GT1           <--------ATHB1   catactgggccctgagcaaaacaattttagttatatgacttgtgaaacttaaatgggttttaatcgaatggtaacttcatctaatttgtttgaataattc  9481100                                   <---------ICU4                                   <--------HAHB4                  --------->ARR11(3)                  --------->AHL20(1)                  <---------AHL20(1)         --------->ARR14(2)                  <---------ARR11(3)    <-----------GT1                 --------->RVE1(1) --------->ATHB12            -------->HAHB4         --------->YAB1      --------->TOE2(3)           --------->ICU4 <----------DOF2    ------->TEIL --------->CCA1(1)<---------ATHB12          ----------->RAV1(1)                     < --------ICU4 <---------YAB1    --------->YAB1   ------>ZmHOX2a(1)                    --------->TOE1(3) -------YAB1--------->YAB1 --------->ZAT18   <---------ARR14(2)------->GAMYB          --------->TOE2(3) ---->YAB1 <---------YAB1  <---------ZAT14  --------->GLK1(1) --------->MYB46(3)    ------->TEIL    -   atcatggaccttaatgataatatcttgagtctactaatcatttcacaaatcctttcattttccaacagcaagtagcctgatttttgaacctcagcgatag  9481200               --------->KAN4(2)                                                              -------             --------->WRKY18(1)                                                              <------         --------->ZAT14                                                      <---------AHL20(2)         <---------ZAT18                                                     --------->AHL20(2)         --------->ZAT18                                                     <---------AHL20(2)        --------->ALFIN1  --------->DAG2                                 --------->ICU4   --------->AHL20(2)     --------->DAG2      ---------->DOF2                        --------->ANAC58          <---------AHL20(2)    ---------->DOF2 --------->ANAC46        <---------AHL20(2)  --------->ANAC58          --------->AHL20(1) ---------At4g35610 --------->ANAC58    <---------AHL20(2)      --------->ANAC46         --------->AHL20(2) -------->At4g35610 --------->ANAC58  <----------DOF2 ------->TEIL---------->DOF2    --------------->AGL15   acagcttaaagtgcggtcattctcgcaaaaagctatcagtctttatttgattcacgaacattatacacgaaagtcaaaattaaataaccaaaaaaattaa  9481300           --------->ANAC58           --------->ANAC58                   <---------AHL20(2)                                    <   --------->ANAC58                          <---------AHL20(2)                                    --   --------->ANAC58                          --------->AHL20(1)                             ------>MYB46(1)  --------->DAG2                  <---------WOX13(1)                                        ------>MYB83 ---------->DOF2                --------->ATHB12                       --------->GLK1(2) --------->ANAC46 -->AHL20(2)                   <---------YAB1--------->AHL20(2)--------->MYB59      --------->CCA1(2) ---AHL20(2)          <---------ZAT14<----------ID1        ----------->GT1--------->ALFIN1<---------MYB59   acaaaaagcaaacaagaaaacgacttctctggtatgattggaacaaatttaatagagagagaggttagataagaatgtggtagaagataagacccaacta  9481400                                                        <---------ANAC46                                                        <---------ANAC55(2)                                                        <---------ANAC58                                                        <---------ANAC58                                                        --------->ANAC55(2)                                                 ------->GAMYB                                               -------->P                                               ------>MYB83                <------------------------ANAC81                                               ------>MYB46(1)    --------->ANAC46            <---------TCP15(1)                ------>NtERF2       --------->ANAC58            --------->PCF2                    <---------ALFIN1    <---------ALFIN1           <---------PCF2                    --------->DEAR3(1)   --------->ANAC58      ---------->ID1           <-----------HVH21              --------->ANAC46      <---------ALFIN1  <---------DAG2    --------->ICU4         <----------DOF2--------->ANAC58 --------->ARR14(2)     <----------DOF2 -----------HVH21      ---------->ID1     --------->ANAC58 <---------ARR14(2)<----------DOF2 ------->ANAC46    <----------DOF2   --------->ZAT14<-----------HVH21   ------>ZmHOX2a(1)  <---------MYB52(1)   cgcgtcataactgggtcccatctttgtctctttcccttcttcactcgccaaccccatcgcgtgtccccacgctccttccctttactttttctcgttatcc  9481500                                                                                         --------->ZAT14                                                                                         <---------ZAT14                                                                                       --------->ZAT18                                     --------->AHL20(2)                                --------->REM1(2)                                     --------->YAB1                                    --------->ZAT14                                  --------->YAB1                 --------->HSFC1(2)    <---------ZAT14                      --------->ARR11(3)                         --------->HSFB2a(1)<---------ANAC46                      <---------GLK1(2)                          <---------HSFB2a(1)<---------ANAC58                      <---------ARR11(3)              <---------AHL20(2)       <-----------RAV1(1)        <---------GLK1(2)      --------->TOE2(3)    <----------DOF2      ------>ZmHOX2a(2)       <---   --------->ANAC46*TSS<---------RVE1(1)      ---------->DOF2    <---------HSFC1(2) <---------ANAC58   aaaacacgacgattcttcattttagatttttttcattaataaaaaaaaaaaagtcttttattgcagaaatttcgatcgtttttgttgtgtgtacagagag  9481600                                                           <---------RAP2.3(1)                                                          <---------RRTF1(2)                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------RAP2.6(2)                                                          <---------RAP2.3(3)                                                          <---------RAP2.3(2)                                                         <---------LBD16         <-----------RAV1(1)                         --------->ARR14(2)  <---------ANAC58                                --------->AHL20(2)    <-----------GT1  <---------ANAC46         <-----------GT1        --------->YAB1<----------DOF2  <---------ANAC58 ------->GAMYB                 <---------ATHB12      <---------CCA1(2) ------GLK1(2)    --------->MYB46(3)           --------->WOX13(1)   <----------DOF2                 <   attatcgtgttttgttggcaatcgccattaaaccttcttccctctaacccaatcaaatttgcggctctttcttttatcttctcgcctcggttttagcaaa  9481700                                                                           <---------YAB1                                                                        <---------YAB1                    --------->ANAC58                               <---------ANAC46                    --------->ANAC58                              --------->ALFIN1                 ------>ZmHOX2a(1)           <------MYB83       <---------ANAC46       --------->ARR11(3)      <----------DOF2        <----------DOF2   --------->ICU4 <---------MYB52(1) --------->ANAC46         <------MYB46(1)    <---------ANAC58 --------->ANAC58 ----------DOF2 --------->TOE2(3)          <---------WOX13(1)   <---------ANAC58 --------->ANAC58   -   ccctttagttatcttcttcctcaagcaatttttcttttggattagattggtgttttcttttggtttgtgtggtgatgatgagaaggcaacgagatgaaca  9481800                                                                                                 <---                                                                                                -----                                                                                           ==========                                                                                           --------->MYB46(3)                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                          ===========                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                         <---------CCA1(2)                                     <---------ICU4   -----                       --------->YAB1                                    ----------->RAV1(2)    -----                    --------->WOX13(1)                                   --------->ANAC55(2) ------>NtERF2                  <------ZmHOX2a(2)                              --------->GLK1(1)     --------->LBD16                 --------->ARR11(3)             <---------MYB52(1)   <----------DOF2 <---------LBD16             <-----------GT1          ------->TEIL       ------>ZmHOX2a(1)    <---------YAB1--------- -------->GLK1(2)<---------ARR11(3)  <---------CCA1(2)------>ZmHOX2a(1)<-----------GT1--------->LBD16   acaatctagggttttctacgatctatcatctcttgttttgaatcttctccgttctcctcctatgccgatttctttacctgatcatttccccgatccgccc  9481900                                                                                                  ---                                                                                                  ---                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                      <---------At4g35610 ---NtERF2                                                                         <-------GAMYB  <-- ---->ANAC58   <----------DOF2                                                    <---------MYB46(3) =================HOX2a_HOX2a                                                     <---------DEAR3(1) =================HOX2a_HOX2a                                             <---------ARR14(2)      <-- ---->ANAC58   <---------DAG2       ---------->ID1                        <---------GLK1(2)  <------MYB46(1) ---->ANAC46  <---------DAG2     ---------->ID1                 <-----------GT1  <------NtERF2   <--- >DEAR3(1) ------>ZmHOX2a(1)    <-----------GT1   <----------DOF2         --------->ARR14(2) <------MYB83   gctagaattcgtcctcccttttcttcgcatcgtttttcgtcttcttcgccttctttggctcatatttctccgtctggattcgcgtcgttgctgcttggta  9482000  Previous    Next  AGI:  At1g27290.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95086.1) Range:  from: 9481519    to: 9482899    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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